Displaying data sets 50301 - 50400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G23680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.402 x 10-3 67 8 21 2 89.33% 8.70% 75 23 TAIR8 Avg. embryo expression (dissected): '434.122'
Avg. embryo expression (LCM): '233.062'
AT4G23680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9225 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.71183 x 10-1 39 22 8 15 63.93% 65.22% 61 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.791532'
Avg. expression score for this sample: '298.758'
Avg. expression score in LCM sample: '506.475'
Tissue used: 'pure endosperm, no chalazal'
AT4G23670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 3 12 26 40.00% 68.42% 5 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.791532'
Avg. expression score for this sample: '29.4053'
Avg. expression score in LCM sample: '506.475'
Tissue used: 'full endosperm'
AT4G23670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.69362 x 10-1 18 12 7 6 60.00% 46.15% 30 13 TAIR8 Avg. embryo expression (dissected): '273.594'
Avg. embryo expression (LCM): '22.6306'
AT4G23670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.46 x 10-4 22 0 100.00% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23660 PPT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 3 0 2 57.14% 100.00% 7 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.711194'
Avg. expression score for this sample: '19.692'
Avg. expression score in LCM sample: '7.7311'
Tissue used: 'pure endosperm, no chalazal'
AT4G23660 PPT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.76471 x 10-1 3 0 1 5 100.00% 83.33% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.711194'
Avg. expression score for this sample: '30.9713'
Avg. expression score in LCM sample: '7.7311'
Tissue used: 'full endosperm'
AT4G23660 PPT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 2 1 1 60.00% 50.00% 5 2 TAIR8 Avg. embryo expression (dissected): '32.2936'
Avg. embryo expression (LCM): '25.7451'
AT4G23660 PPT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.63158 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23660 PPT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.53794 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23660 PPT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23650 CDPK6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '279.528'
Avg. expression score in LCM sample: '202.758'
Tissue used: 'pure endosperm, no chalazal'
AT4G23650 CDPK6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '340.915'
Avg. expression score in LCM sample: '202.758'
Tissue used: 'full endosperm'
AT4G23650 CDPK6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '343.401'
Avg. embryo expression (LCM): '273.903'
AT4G23650 CDPK6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23650 CDPK6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23650 CDPK6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23640 TRH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 4 0 7 55.56% 100.00% 9 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.151661'
Avg. expression score for this sample: '136.224'
Avg. expression score in LCM sample: '45.0638'
Tissue used: 'pure endosperm, no chalazal'
AT4G23640 TRH1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.7683 x 10-2 9 1 0 8 90.00% 100.00% 10 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.151661'
Avg. expression score for this sample: '101.616'
Avg. expression score in LCM sample: '45.0638'
Tissue used: 'full endosperm'
AT4G23640 TRH1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 3 0 0 25.00% 4 0 TAIR8 Avg. embryo expression (dissected): '129.563'
Avg. embryo expression (LCM): '48.2375'
AT4G23640 TRH1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23640 TRH1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 16 2 88.89% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23640 TRH1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.82308 x 10-1 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23635 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G23635 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G23635 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G23635 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23635 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23635 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23630 BTI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.45503 x 10-1 17 0 15 0 100.00% 0.00% 17 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.8e-12'
Avg. expression score for this sample: '5205.96'
Avg. expression score in LCM sample: '2949.47'
Tissue used: 'pure endosperm, no chalazal'
AT4G23630 BTI1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.2 x 10-13 70 0 147 0 100.00% 0.00% 70 147 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.8e-12'
Avg. expression score for this sample: '4188.5'
Avg. expression score in LCM sample: '2949.47'
Tissue used: 'full endosperm'
AT4G23630 BTI1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.46965 x 10-1 8 0 4 0 100.00% 0.00% 8 4 TAIR8 Avg. embryo expression (dissected): '2564.35'
Avg. embryo expression (LCM): '2123.13'
AT4G23630 BTI1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.8 x 10-6 0 34 0.00% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23630 BTI1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-11 0 69 0.00% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23630 BTI1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 151 0 100.00% 151 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 2 2 8 66.67% 80.00% 6 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.87707'
Avg. expression score for this sample: '9.0682'
Avg. expression score in LCM sample: '13.7719'
Tissue used: 'pure endosperm, no chalazal'
AT4G23620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.11362 x 10-1 22 12 17 25 64.71% 59.52% 34 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.87707'
Avg. expression score for this sample: '27.6064'
Avg. expression score in LCM sample: '13.7719'
Tissue used: 'full endosperm'
AT4G23620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.09909 x 10-1 15 26 4 4 36.59% 50.00% 41 8 TAIR8 Avg. embryo expression (dissected): '34.4142'
Avg. embryo expression (LCM): '67.6405'
AT4G23620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.91166 x 10-1 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.73641 x 10-1 75 50 60.00% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-5 77 7 91.67% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.70504'
Avg. expression score in LCM sample: '14.6244'
Tissue used: 'pure endosperm, no chalazal'
AT4G23610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.50659'
Avg. expression score in LCM sample: '14.6244'
Tissue used: 'full endosperm'
AT4G23610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.52767'
Avg. embryo expression (LCM): '0'
AT4G23610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23600 CORI3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23600 CORI3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.4701 x 10-1 27 12 3 22 69.23% 88.00% 39 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.029311'
Avg. expression score for this sample: '36.3895'
Avg. expression score in LCM sample: '12.6402'
Tissue used: 'pure endosperm, no chalazal'
AT4G23600 CORI3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.7018 x 10-2 74 25 14 52 74.75% 78.79% 99 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.029311'
Avg. expression score for this sample: '68.6616'
Avg. expression score in LCM sample: '12.6402'
Tissue used: 'full endosperm'
AT4G23600 CORI3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.1593 x 10-1 1 18 0 12 5.26% 100.00% 19 12 TAIR8 Avg. embryo expression (dissected): '37.6742'
Avg. embryo expression (LCM): '47.8607'
AT4G23600 CORI3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.81944 x 10-1 14 5 73.68% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23600 CORI3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G23590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G23590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G23590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.222776'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G23580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.37876'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G23580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.504468'
Avg. embryo expression (LCM): '0'
AT4G23580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23570 SGT1A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.722 x 10-3 92 10 90.20% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23570 SGT1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 26 15 12 31 63.41% 72.09% 41 43 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000534'
Avg. expression score for this sample: '269.704'
Avg. expression score in LCM sample: '12.8166'
Tissue used: 'pure endosperm, no chalazal'
AT4G23570 SGT1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.9 x 10-5 85 31 27 157 73.28% 85.33% 116 184 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000534'
Avg. expression score for this sample: '236.013'
Avg. expression score in LCM sample: '12.8166'
Tissue used: 'full endosperm'
AT4G23570 SGT1A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.97118 x 10-1 49 49 9 14 50.00% 60.87% 98 23 TAIR8 Avg. embryo expression (dissected): '406.337'
Avg. embryo expression (LCM): '75.7533'
AT4G23570 SGT1A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.98347 x 10-1 15 8 65.22% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23570 SGT1A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.64323 x 10-1 64 11 85.33% 75 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23560 GH9B15 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23560 GH9B15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.6964'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G23560 GH9B15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '39.4822'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G23560 GH9B15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.68643'
Avg. embryo expression (LCM): '0'
AT4G23560 GH9B15 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23560 GH9B15 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23550 WRKY29 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23550 WRKY29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G23550 WRKY29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.732882'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G23550 WRKY29 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G23550 WRKY29 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23550 WRKY29 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1229 x 10-2 59 15 79.73% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.91905 x 10-1 6 10 3 10 37.50% 76.92% 16 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.73768'
Avg. expression score for this sample: '21.5283'
Avg. expression score in LCM sample: '4.79152'
Tissue used: 'pure endosperm, no chalazal'
AT4G23540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 20 4 12 13 83.33% 52.00% 24 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.73768'
Avg. expression score for this sample: '39.2571'
Avg. expression score in LCM sample: '4.79152'
Tissue used: 'full endosperm'
AT4G23540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.50126 x 10-1 18 21 8 8 46.15% 50.00% 39 16 TAIR8 Avg. embryo expression (dissected): '60.5733'
Avg. embryo expression (LCM): '98.8486'
AT4G23540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.31962 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.85836 x 10-1 38 18 67.86% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '47.2589'
Avg. expression score in LCM sample: '23.1786'
Tissue used: 'pure endosperm, no chalazal'
AT4G23530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '35.5031'
Avg. expression score in LCM sample: '23.1786'
Tissue used: 'full endosperm'
AT4G23530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '50.19'
Avg. embryo expression (LCM): '43.1387'
AT4G23530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G23530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'