| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Carubv10013729m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.68 | 8 | 0 | 4 | 11 | 100.00% | 73.33% | 8 | 15 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10013729m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | no data | 3.415323 x 10-1 | 20 | 2 | 7 | 23 | 90.91% | 76.67% | 22 | 30 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10013585m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 55 | 0 | 0 | 93 | 100.00% | 100.00% | 55 | 93 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10013585m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 8.58373 x 10-2 | 2 | 0 | 0 | 8 | 100.00% | 100.00% | 2 | 8 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10013500m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||||
| Carubv10013500m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 195 | 1 | 0 | 42 | 99.49% | 100.00% | 196 | 42 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10013415m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 28 | 0 | 0 | 38 | 100.00% | 100.00% | 28 | 38 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10013415m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 4.843325 x 10-1 | 0 | 0 | 3 | 3 | 50.00% | 0 | 6 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
|||||
| Carubv10013246m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 0.0 | 3 | 102 | 210 | 3 | 2.86% | 1.41% | 105 | 213 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10013246m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 3 | 160 | 207 | 53 | 1.84% | 20.38% | 163 | 260 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10013236m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | not imprinted | 0.63 | 23 | 8 | 5 | 7 | 74.19% | 58.33% | 31 | 12 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10013236m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 8.219809 x 10-1 | 48 | 6 | 17 | 37 | 88.89% | 68.52% | 54 | 54 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10013106m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 4.845057 x 10-1 | 47 | 73 | 110 | 243 | 39.17% | 68.84% | 120 | 353 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10013106m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | not imprinted | 0.0 | 84 | 218 | 516 | 180 | 27.81% | 25.86% | 302 | 696 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10013066m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 5.305 x 10-4 | 230 | 97 | 55 | 194 | 70.34% | 77.91% | 327 | 249 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10013066m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 209 | 102 | 14 | 219 | 67.20% | 93.99% | 311 | 233 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10013032m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | not imprinted | 7.0453 x 10-3 | 14 | 8 | 0 | 18 | 63.64% | 100.00% | 22 | 18 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10013032m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | not imprinted | 0.0 | 48 | 2 | 0 | 39 | 96.00% | 100.00% | 50 | 39 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10012629m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 1552 | 242 | 1405 | 765 | 86.51% | 35.25% | 1794 | 2170 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10012629m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | not imprinted | 4.14 x 10-24 | 459 | 8 | 3 | 229 | 98.29% | 98.71% | 467 | 232 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10012588m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.12 | 12 | 4 | 8 | 6 | 75.00% | 42.86% | 16 | 14 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10012588m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | no data | 1.109032 x 10-1 | 36 | 3 | 8 | 33 | 92.31% | 80.49% | 39 | 41 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10012571m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 4.71 x 10-8 | 58 | 26 | 16 | 130 | 69.05% | 89.04% | 84 | 146 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10012571m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.02 | 41 | 10 | 5 | 33 | 80.39% | 86.84% | 51 | 38 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10012514m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0 | 0 | 0 | 0 | 0 | 0 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
|||||||
| Carubv10012514m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | no data | 2.24 x 10-6 | 3 | 28 | 19 | 4 | 9.68% | 17.39% | 31 | 23 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10011963m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 7.276528 x 10-1 | 9 | 18 | 9 | 15 | 33.33% | 62.50% | 27 | 24 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10011963m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | not imprinted | 0.58 | 8 | 13 | 2 | 2 | 38.10% | 50.00% | 21 | 4 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10011910m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 1.84 x 10-17 | 1763 | 28 | 25 | 258 | 98.44% | 91.17% | 1791 | 283 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10011910m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 5571 | 21 | 6 | 1111 | 99.62% | 99.46% | 5592 | 1117 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10011892m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.15 | 20 | 14 | 15 | 16 | 58.82% | 51.61% | 34 | 31 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10011892m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 1.190669 x 10-1 | 17 | 38 | 18 | 20 | 30.91% | 52.63% | 55 | 38 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10011873m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 1.7251 x 10-3 | 65 | 25 | 38 | 141 | 72.22% | 78.77% | 90 | 179 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10011873m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 36 | 8 | 1 | 26 | 81.82% | 96.30% | 44 | 27 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10011835m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.26 | 309 | 59 | 188 | 329 | 83.97% | 63.64% | 368 | 517 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10011835m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | not imprinted | 5.05 x 10-15 | 147 | 1 | 2 | 140 | 99.32% | 98.59% | 148 | 142 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10011676m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 2.49 x 10-25 | 5 | 81 | 123 | 49 | 5.81% | 28.49% | 86 | 172 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10011676m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | PEG | 2.21 x 10-7 | 4 | 37 | 17 | 1 | 9.76% | 5.56% | 41 | 18 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10011407m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | pat bias | PEG | 2.501509 x 10-1 | 4 | 25 | 11 | 12 | 13.79% | 52.17% | 29 | 23 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency PEG' |
||||
| Carubv10011407m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 1.17 x 10-15 | 11 | 30 | 57 | 15 | 26.83% | 20.83% | 41 | 72 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency PEG' |
||||
| Carubv10011303m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 1.84 x 10-6 | 2150 | 49 | 218 | 646 | 97.77% | 74.77% | 2199 | 864 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10011303m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | not imprinted | 0.0 | 458 | 11 | 13 | 289 | 97.65% | 95.70% | 469 | 302 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10011251m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 2.375423 x 10-1 | 9 | 0 | 0 | 4 | 100.00% | 100.00% | 9 | 4 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10011251m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 25 | 1 | 0 | 22 | 96.15% | 100.00% | 26 | 22 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10011066m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 4.5 x 10-16 | 300 | 0 | 0 | 140 | 100.00% | 100.00% | 300 | 140 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10011066m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 2.69 x 10-26 | 79 | 0 | 0 | 236 | 100.00% | 100.00% | 79 | 236 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10010797m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 17 | 4 | 7 | 93 | 80.95% | 93.00% | 21 | 100 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10010797m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 7.79 x 10-7 | 39 | 24 | 10 | 96 | 61.90% | 90.57% | 63 | 106 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10010753m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 5.1333 x 10-3 | 144 | 15 | 0 | 20 | 90.57% | 100.00% | 159 | 20 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10010753m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | MEG | 7.0453 x 10-3 | 151 | 9 | 0 | 18 | 94.38% | 100.00% | 160 | 18 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10010673m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 8.23 x 10-10 | 33 | 0 | 33 | 8 | 100.00% | 19.51% | 33 | 41 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10010673m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.51 | 58 | 0 | 6 | 18 | 100.00% | 75.00% | 58 | 24 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10010601m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | mat bias | MEG | 5.13 x 10-22 | 197 | 35 | 71 | 467 | 84.91% | 86.80% | 232 | 538 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10010601m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 4.89 x 10-26 | 152 | 14 | 2 | 242 | 91.57% | 99.18% | 166 | 244 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10010550m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 29 | 0 | 0 | 317 | 100.00% | 100.00% | 29 | 317 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10010550m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 67 | 1 | 0 | 356 | 98.53% | 100.00% | 68 | 356 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10010529m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 5.51 x 10-7 | 907 | 458 | 256 | 749 | 66.45% | 74.53% | 1365 | 1005 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10010529m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 317 | 143 | 126 | 1165 | 68.91% | 90.24% | 460 | 1291 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10010527m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 1720 | 24470 | 20972 | 3586 | 6.57% | 14.60% | 26190 | 24558 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency PEG' |
||||
| Carubv10010527m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 0.0 | 621 | 14462 | 12383 | 1186 | 4.12% | 8.74% | 15083 | 13569 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency PEG' |
||||
| Carubv10010514m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | not imprinted | 5.26063 x 10-2 | 33 | 0 | 0 | 10 | 100.00% | 100.00% | 33 | 10 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10010514m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.02 | 26 | 10 | 3 | 26 | 72.22% | 89.66% | 36 | 29 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10010423m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.03 | 15 | 11 | 3 | 25 | 57.69% | 89.29% | 26 | 28 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10010423m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 7.555012 x 10-1 | 31 | 3 | 16 | 36 | 91.18% | 69.23% | 34 | 52 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10010090m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | MEG | 4.70954 x 10-2 | 16 | 0 | 0 | 11 | 100.00% | 100.00% | 16 | 11 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10010090m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 5.56 x 10-6 | 36 | 1 | 2 | 56 | 97.30% | 96.55% | 37 | 58 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10010053m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 4.89356 x 10-2 | 22 | 11 | 32 | 101 | 66.67% | 75.94% | 33 | 133 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10010053m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 26 | 9 | 8 | 81 | 74.29% | 91.01% | 35 | 89 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10009862m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 2.22 x 10-4 | 38 | 18 | 2 | 41 | 67.86% | 95.35% | 56 | 43 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10009862m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.5 | 78 | 23 | 85 | 191 | 77.23% | 69.20% | 101 | 276 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10009796m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | pat bias | PEG | 2.0 x 10-19 | 110 | 117 | 130 | 73 | 48.46% | 35.96% | 227 | 203 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10009796m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 106 | 267 | 310 | 144 | 28.42% | 31.72% | 373 | 454 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10009760m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | not imprinted | 6.77115 x 10-2 | 23 | 0 | 0 | 9 | 100.00% | 100.00% | 23 | 9 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10009760m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | not imprinted | 0.0 | 66 | 0 | 0 | 55 | 100.00% | 100.00% | 66 | 55 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10009744m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 61 | 29 | 19 | 162 | 67.78% | 89.50% | 90 | 181 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10009744m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 5.543 x 10-4 | 16 | 10 | 5 | 49 | 61.54% | 90.74% | 26 | 54 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10009577m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 1.05 x 10-10 | 186 | 22 | 16 | 157 | 89.42% | 90.75% | 208 | 173 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10009577m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | mat bias | MEG | 3.928162 x 10-1 | 41 | 0 | 29 | 74 | 100.00% | 71.84% | 41 | 103 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10009443m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 768 | 7 | 4 | 660 | 99.10% | 99.40% | 775 | 664 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10009443m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 1.76 x 10-21 | 396 | 1 | 3 | 206 | 99.75% | 98.56% | 397 | 209 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10009392m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 2.91 x 10-5 | 15 | 7 | 0 | 40 | 68.18% | 100.00% | 22 | 40 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10009392m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 13 | 9 | 0 | 47 | 59.09% | 100.00% | 22 | 47 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10009194m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.76 | 48 | 3 | 8 | 19 | 94.12% | 70.37% | 51 | 27 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10009194m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 3.2 x 10-17 | 250 | 19 | 61 | 15 | 92.94% | 19.74% | 269 | 76 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10009178m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | not imprinted | 0.0 | 983 | 8 | 678 | 5686 | 99.19% | 89.35% | 991 | 6364 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10009178m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 0.0 | 2877 | 866 | 470 | 4834 | 76.86% | 91.14% | 3743 | 5304 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10008926m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 5.752 x 10-4 | 49 | 1 | 0 | 28 | 98.00% | 100.00% | 50 | 28 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10008926m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 551 | 3 | 1 | 325 | 99.46% | 99.69% | 554 | 326 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10008895m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 3.25051 x 10-1 | 24 | 7 | 15 | 20 | 77.42% | 57.14% | 31 | 35 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10008895m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.78 | 50 | 3 | 18 | 40 | 94.34% | 68.97% | 53 | 58 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10008662m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 32 | 0 | 0 | 25 | 100.00% | 100.00% | 32 | 25 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10008662m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 1.15913 x 10-2 | 1 | 0 | 4 | 0 | 100.00% | 0.00% | 1 | 4 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10008641m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | no data | 6.93643 x 10-2 | 7 | 20 | 12 | 10 | 25.93% | 45.45% | 27 | 22 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10008641m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.5 | 4 | 10 | 7 | 9 | 28.57% | 56.25% | 14 | 16 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10008634m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | not imprinted | 0.0 | 61 | 6 | 26 | 253 | 91.04% | 90.68% | 67 | 279 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10008634m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 4.39 x 10-9 | 125 | 66 | 76 | 326 | 65.45% | 81.09% | 191 | 402 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10008608m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 2.113875 x 10-1 | 10 | 5 | 2 | 12 | 66.67% | 85.71% | 15 | 14 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10008608m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | no data | 0.06 | 28 | 0 | 10 | 43 | 100.00% | 81.13% | 28 | 53 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10008544m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.63 | 87 | 40 | 40 | 90 | 68.50% | 69.23% | 127 | 130 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10008544m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 4.115858 x 10-1 | 122 | 11 | 19 | 50 | 91.73% | 72.46% | 133 | 69 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |