GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM5G882351	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.39721 x 10^-2	562	400	508	456	58.42%	47.30%	962	964	RefGen V2	χ2 p-value for B73 x Mo17: '1.76e-07' χ2 p-value for Mo17 x B73: '.0939721' Biased in favor of strain: ''
GRMZM5G882351	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.24 x 10^-7	658	199	456	662	76.78%	59.21%	857	1118	RefGen V2	χ2 p-value for B73 x Mo17: '3.39e-10' χ2 p-value for Mo17 x B73: '1.24e-07' Biased in favor of strain: 'B73'
GRMZM5G882300	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	9	0	10	0.00%	100.00%	9	10	RefGen V2	χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: ''
GRMZM5G882300	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G882228	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	3469	1550	3496	1728	69.12%	33.08%	5019	5224	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G882228	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2719	816	2165	1387	76.92%	39.05%	3535	3552	RefGen V2	χ2 p-value for B73 x Mo17: '3.15e-38' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G881996	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	2	1	100.00%	33.33%	1	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM5G881996	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	1		50.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G881961	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.830914 x 10^-1	11	13	11	19	45.83%	63.33%	24	30	RefGen V2	χ2 p-value for B73 x Mo17: '.6830914' χ2 p-value for Mo17 x B73: '.144127' Biased in favor of strain: ''
GRMZM5G881961	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.172907 x 10^-1	11	8	3	15	57.89%	83.33%	19	18	RefGen V2	χ2 p-value for B73 x Mo17: '.4172907' χ2 p-value for Mo17 x B73: '.1336145' Biased in favor of strain: ''
GRMZM5G881908	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.84028 x 10^-1	23	24	25	13	48.94%	34.21%	47	38	RefGen V2	χ2 p-value for B73 x Mo17: '.884028' χ2 p-value for Mo17 x B73: '.0515759' Biased in favor of strain: ''
GRMZM5G881908	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.61522 x 10^-1	38	12	28	34	76.00%	54.84%	50	62	RefGen V2	χ2 p-value for B73 x Mo17: '.161522' χ2 p-value for Mo17 x B73: '.0481934' Biased in favor of strain: ''
GRMZM5G881902	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.62 x 10^-6	37	0	23	0	100.00%	0.00%	37	23	RefGen V2	χ2 p-value for B73 x Mo17: '1.18e-09' χ2 p-value for Mo17 x B73: '1.62e-06' Biased in favor of strain: 'B73'
GRMZM5G881902	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.01 x 10^-17	147	0	73	1	100.00%	1.35%	147	74	RefGen V2	χ2 p-value for B73 x Mo17: '1.01e-17' χ2 p-value for Mo17 x B73: '9.43e-33' Biased in favor of strain: 'B73'
GRMZM5G881887	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	2	7	1	71.43%	12.50%	7	8	RefGen V2	χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: ''
GRMZM5G881887	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.499 x 10^-4	60	9	16	1	86.96%	5.88%	69	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0003499' χ2 p-value for Mo17 x B73: '1.06e-07' Biased in favor of strain: 'B73'
GRMZM5G881846	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.07 x 10^-10	46	0	38	0	100.00%	0.00%	46	38	RefGen V2	χ2 p-value for B73 x Mo17: '1.18e-11' χ2 p-value for Mo17 x B73: '7.07e-10' Biased in favor of strain: 'B73'
GRMZM5G881846	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	5	0	100.00%	0.00%	2	5	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: ''
GRMZM5G881803	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.46 x 10^-24	280	580	166	450	32.56%	73.05%	860	616	RefGen V2	χ2 p-value for B73 x Mo17: '1.46e-24' χ2 p-value for Mo17 x B73: '2.56e-30' Biased in favor of strain: 'Mo17'
GRMZM5G881803	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.114475 x 10^-1	74	42	53	136	63.79%	71.96%	116	189	RefGen V2	χ2 p-value for B73 x Mo17: '.5114475' χ2 p-value for Mo17 x B73: '.1228228' Biased in favor of strain: ''
GRMZM5G881775	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.735682 x 10^-1	45	26	32	22	63.38%	40.74%	71	54	RefGen V2	χ2 p-value for B73 x Mo17: '.0241405' χ2 p-value for Mo17 x B73: '.1735682' Biased in favor of strain: ''
GRMZM5G881775	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.69337 x 10^-2	51	12	30	37	80.95%	55.22%	63	67	RefGen V2	χ2 p-value for B73 x Mo17: '.0161582' χ2 p-value for Mo17 x B73: '.0469337' Biased in favor of strain: ''
GRMZM5G881605	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.353167 x 10^-1	68	72	56	47	48.57%	45.63%	140	103	RefGen V2	χ2 p-value for B73 x Mo17: '.7353167' χ2 p-value for Mo17 x B73: '.3751886' Biased in favor of strain: ''
GRMZM5G881605	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.550438 x 10^-1	105	52	39	89	66.88%	69.53%	157	128	RefGen V2	χ2 p-value for B73 x Mo17: '.9550438' χ2 p-value for Mo17 x B73: '.491768' Biased in favor of strain: ''
GRMZM5G881568	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.47 x 10^-11	53	0	43	0	100.00%	0.00%	53	43	RefGen V2	χ2 p-value for B73 x Mo17: '3.34e-13' χ2 p-value for Mo17 x B73: '5.47e-11' Biased in favor of strain: 'B73'
GRMZM5G881568	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.766 x 10^-4	30	1	13	0	96.77%	0.00%	31	13	RefGen V2	χ2 p-value for B73 x Mo17: '.0003766' χ2 p-value for Mo17 x B73: '3.41e-07' Biased in favor of strain: 'B73'
GRMZM5G881369	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.247833 x 10^-1	619	528	534	485	53.97%	47.60%	1147	1019	RefGen V2	χ2 p-value for B73 x Mo17: '.0072108' χ2 p-value for Mo17 x B73: '.1247833' Biased in favor of strain: ''
GRMZM5G881369	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.393616 x 10^-1	398	174	270	222	69.58%	45.12%	572	492	RefGen V2	χ2 p-value for B73 x Mo17: '.1393616' χ2 p-value for Mo17 x B73: '3.77e-24' Biased in favor of strain: ''
GRMZM5G881296	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.5 x 10^-6	301	167	283	187	64.32%	39.79%	468	470	RefGen V2	χ2 p-value for B73 x Mo17: '5.86e-10' χ2 p-value for Mo17 x B73: '9.50e-06' Biased in favor of strain: 'B73'
GRMZM5G881296	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.11 x 10^-7	333	71	185	225	82.43%	54.88%	404	410	RefGen V2	χ2 p-value for B73 x Mo17: '1.83e-11' χ2 p-value for Mo17 x B73: '4.11e-07' Biased in favor of strain: 'B73'
GRMZM5G880720	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G880720	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		14	0	0	2	100.00%	100.00%	14	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0081512' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G880632	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.30954 x 10^-1	26	20	21	18	56.52%	46.15%	46	39	RefGen V2	χ2 p-value for B73 x Mo17: '.3763445' χ2 p-value for Mo17 x B73: '.630954' Biased in favor of strain: ''
GRMZM5G880632	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.99984 x 10^-1	8	4	9	14	66.67%	60.87%	12	23	RefGen V2	χ2 p-value for B73 x Mo17: '.999984' χ2 p-value for Mo17 x B73: '.5553461' Biased in favor of strain: ''
GRMZM5G880508	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.5751 x 10^-3	113	72	87	42	61.08%	32.56%	185	129	RefGen V2	χ2 p-value for B73 x Mo17: '.0025751' χ2 p-value for Mo17 x B73: '.0000743' Biased in favor of strain: 'B73'
GRMZM5G880508	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.823188 x 10^-1	89	36	51	65	71.20%	56.03%	125	116	RefGen V2	χ2 p-value for B73 x Mo17: '.2823188' χ2 p-value for Mo17 x B73: '.0151334' Biased in favor of strain: ''
GRMZM5G880306	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	4	5	100.00%	55.56%	1	9	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.7388827' Biased in favor of strain: ''
GRMZM5G880306	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	3		100.00%	0	3	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G880300	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.56 x 10^-14	495	281	617	321	63.79%	34.22%	776	938	RefGen V2	χ2 p-value for B73 x Mo17: '1.56e-14' χ2 p-value for Mo17 x B73: '4.26e-22' Biased in favor of strain: 'B73'
GRMZM5G880300	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.84 x 10^-13	246	37	101	64	86.93%	38.79%	283	165	RefGen V2	χ2 p-value for B73 x Mo17: '4.84e-13' χ2 p-value for Mo17 x B73: '3.04e-14' Biased in favor of strain: 'B73'
GRMZM5G880102	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G880102	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	1	1	2	50.00%	66.67%	2	3	RefGen V2	χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM5G880028	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.34 x 10^-6	160	56	101	43	74.07%	29.86%	216	144	RefGen V2	χ2 p-value for B73 x Mo17: '1.48e-12' χ2 p-value for Mo17 x B73: '1.34e-06' Biased in favor of strain: 'B73'
GRMZM5G880028	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	4	3	5	42.86%	62.50%	7	8	RefGen V2	χ2 p-value for B73 x Mo17: '.1814437' χ2 p-value for Mo17 x B73: '.8025872' Biased in favor of strain: ''
GRMZM5G879882	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.630915 x 10^-1	234	233	189	162	50.11%	46.15%	467	351	RefGen V2	χ2 p-value for B73 x Mo17: '.9630915' χ2 p-value for Mo17 x B73: '.1495413' Biased in favor of strain: ''
GRMZM5G879882	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.968857 x 10^-1	24	15	11	54	61.54%	83.08%	39	65	RefGen V2	χ2 p-value for B73 x Mo17: '.4968857' χ2 p-value for Mo17 x B73: '.005007' Biased in favor of strain: ''
GRMZM5G879872	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	4	6	3	33.33%	33.33%	6	9	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G879872	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G879851	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.7 x 10^-7	63	17	69	18	78.75%	20.69%	80	87	RefGen V2	χ2 p-value for B73 x Mo17: '2.70e-07' χ2 p-value for Mo17 x B73: '4.56e-08' Biased in favor of strain: 'B73'
GRMZM5G879851	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	0	5	100.00%	100.00%	3	5	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: ''
GRMZM5G879749	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	758	155	724	168	83.02%	18.83%	913	892	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G879749	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	1	1	100.00%	50.00%	5	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: ''
GRMZM5G879665	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.69 x 10^-9	43	3	46	3	93.48%	6.12%	46	49	RefGen V2	χ2 p-value for B73 x Mo17: '3.69e-09' χ2 p-value for Mo17 x B73: '8.11e-10' Biased in favor of strain: 'B73'
GRMZM5G879665	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G879570	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.941633 x 10^-1	114	112	36	59	50.44%	62.11%	226	95	RefGen V2	χ2 p-value for B73 x Mo17: '.8941633' χ2 p-value for Mo17 x B73: '.0182872' Biased in favor of strain: ''
GRMZM5G879570	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.35965 x 10^-2	55	16	95	132	77.46%	58.15%	71	227	RefGen V2	χ2 p-value for B73 x Mo17: '.0535965' χ2 p-value for Mo17 x B73: '.0064873' Biased in favor of strain: ''
GRMZM5G879536	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.9 x 10^-6	70	25	75	17	73.68%	18.48%	95	92	RefGen V2	χ2 p-value for B73 x Mo17: '3.90e-06' χ2 p-value for Mo17 x B73: '1.48e-09' Biased in favor of strain: 'B73'
GRMZM5G879536	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	1	0	0	0.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G879527	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	575	80	620	89	87.79%	12.55%	655	709	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G879527	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.1 x 10^-10	273	54	129	75	83.49%	36.76%	327	204	RefGen V2	χ2 p-value for B73 x Mo17: '1.10e-10' χ2 p-value for Mo17 x B73: '1.31e-19' Biased in favor of strain: 'B73'
GRMZM5G879278	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.75253 x 10^-2	371	574	310	364	39.26%	54.01%	945	674	RefGen V2	χ2 p-value for B73 x Mo17: '4.01e-11' χ2 p-value for Mo17 x B73: '.0375253' Biased in favor of strain: 'Mo17'
GRMZM5G879278	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.32 x 10^-8	679	221	334	365	75.44%	52.22%	900	699	RefGen V2	χ2 p-value for B73 x Mo17: '2.32e-08' χ2 p-value for Mo17 x B73: '5.33e-16' Biased in favor of strain: 'B73'
GRMZM5G879240	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.398929 x 10^-1	65	45	50	48	59.09%	48.98%	110	98	RefGen V2	χ2 p-value for B73 x Mo17: '.0565303' χ2 p-value for Mo17 x B73: '.8398929' Biased in favor of strain: ''
GRMZM5G879240	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.926631 x 10^-1	55	25	36	52	68.75%	59.09%	80	88	RefGen V2	χ2 p-value for B73 x Mo17: '.6926631' χ2 p-value for Mo17 x B73: '.1316679' Biased in favor of strain: ''
GRMZM5G879178	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.73 x 10^-11	80	0	45	1	100.00%	2.17%	80	46	RefGen V2	χ2 p-value for B73 x Mo17: '3.74e-19' χ2 p-value for Mo17 x B73: '8.73e-11' Biased in favor of strain: 'B73'
GRMZM5G879178	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.52 x 10^-10	82	0	21	0	100.00%	0.00%	82	21	RefGen V2	χ2 p-value for B73 x Mo17: '1.52e-10' χ2 p-value for Mo17 x B73: '9.13e-11' Biased in favor of strain: 'B73'
GRMZM5G879172	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	4	2	5	20.00%	71.43%	5	7	RefGen V2	χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: ''
GRMZM5G879172	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G879127	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	4	0	2	0.00%	100.00%	4	2	RefGen V2	χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM5G879127	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G879116	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.8873 x 10^-3	347	255	398	324	57.64%	44.88%	602	722	RefGen V2	χ2 p-value for B73 x Mo17: '.0001771' χ2 p-value for Mo17 x B73: '.0058873' Biased in favor of strain: 'B73'
GRMZM5G879116	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.5784 x 10^-3	338	85	141	210	79.91%	59.83%	423	351	RefGen V2	χ2 p-value for B73 x Mo17: '7.66e-09' χ2 p-value for Mo17 x B73: '.0065784' Biased in favor of strain: 'B73'
GRMZM5G878970	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.907458 x 10^-1	26	24	26	27	52.00%	50.94%	50	53	RefGen V2	χ2 p-value for B73 x Mo17: '.7772974' χ2 p-value for Mo17 x B73: '.8907458' Biased in favor of strain: ''
GRMZM5G878970	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.016407 x 10^-1	116	66	47	114	63.74%	70.81%	182	161	RefGen V2	χ2 p-value for B73 x Mo17: '.4016407' χ2 p-value for Mo17 x B73: '.2650408' Biased in favor of strain: ''
GRMZM5G878913	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	336	26	325	27	92.82%	7.67%	362	352	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G878913	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.46 x 10^-8	142	20	117	39	87.65%	25.00%	162	156	RefGen V2	χ2 p-value for B73 x Mo17: '1.46e-08' χ2 p-value for Mo17 x B73: '2.46e-28' Biased in favor of strain: 'B73'
GRMZM5G878732	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.69874 x 10^-2	125	90	70	111	58.14%	61.33%	215	181	RefGen V2	χ2 p-value for B73 x Mo17: '.0169874' χ2 p-value for Mo17 x B73: '.0023075' Biased in favor of strain: ''
GRMZM5G878732	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.593293 x 10^-1	109	63	79	227	63.37%	74.18%	172	306	RefGen V2	χ2 p-value for B73 x Mo17: '.3593293' χ2 p-value for Mo17 x B73: '.0052845' Biased in favor of strain: ''
GRMZM5G878615	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	542	0	409	0	100.00%	0.00%	542	409	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G878615	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	767	0	352	1	100.00%	0.28%	767	353	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM5G878603	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.697 x 10^-4	5	23	22	3	17.86%	12.00%	28	25	RefGen V2	χ2 p-value for B73 x Mo17: '.0006697' χ2 p-value for Mo17 x B73: '.0001447' Biased in favor of strain: ''
GRMZM5G878603	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	0	1	0	100.00%	0.00%	5	1	RefGen V2	χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM5G878582	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.68139 x 10^-2	400	313	336	281	56.10%	45.54%	713	617	RefGen V2	χ2 p-value for B73 x Mo17: '.0011213' χ2 p-value for Mo17 x B73: '.0268139' Biased in favor of strain: 'B73'
GRMZM5G878582	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.46 x 10^-11	456	117	306	334	79.58%	52.19%	573	640	RefGen V2	χ2 p-value for B73 x Mo17: '5.46e-11' χ2 p-value for Mo17 x B73: '7.83e-15' Biased in favor of strain: 'B73'
GRMZM5G878561	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.414806 x 10^-1	7	12	12	13	36.84%	52.00%	19	25	RefGen V2	χ2 p-value for B73 x Mo17: '.2513491' χ2 p-value for Mo17 x B73: '.8414806' Biased in favor of strain: ''
GRMZM5G878561	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	4	5	100.00%	55.56%	3	9	RefGen V2	χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.4795' Biased in favor of strain: ''
GRMZM5G878558	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	1		100.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM5G878558	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	2		100.00%	0	2	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM5G878541	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.378197 x 10^-1	152	122	106	95	55.47%	47.26%	274	201	RefGen V2	χ2 p-value for B73 x Mo17: '.0699296' χ2 p-value for Mo17 x B73: '.4378197' Biased in favor of strain: ''
GRMZM5G878541	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.173103 x 10^-1	98	17	28	44	85.22%	61.11%	115	72	RefGen V2	χ2 p-value for B73 x Mo17: '.0000244' χ2 p-value for Mo17 x B73: '.3173103' Biased in favor of strain: ''
GRMZM5G878490	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.556 x 10^-3	98	64	93	55	60.49%	37.16%	162	148	RefGen V2	χ2 p-value for B73 x Mo17: '.007556' χ2 p-value for Mo17 x B73: '.0017866' Biased in favor of strain: 'B73'
GRMZM5G878490	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999998 x 10^-1	11	8	7	14	57.89%	66.67%	19	21	RefGen V2	χ2 p-value for B73 x Mo17: '.4172907' χ2 p-value for Mo17 x B73: '.9999998' Biased in favor of strain: ''
GRMZM5G878379	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.71 x 10^-15	417	183	339	161	69.50%	32.20%	600	500	RefGen V2	χ2 p-value for B73 x Mo17: '1.26e-21' χ2 p-value for Mo17 x B73: '1.71e-15' Biased in favor of strain: 'B73'
GRMZM5G878379	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.329071 x 10^-1	151	84	71	109	64.26%	60.56%	235	180	RefGen V2	χ2 p-value for B73 x Mo17: '.4329071' χ2 p-value for Mo17 x B73: '.0819902' Biased in favor of strain: ''
GRMZM5G878371	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	13	13	14	7	50.00%	33.33%	26	21	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1266305' Biased in favor of strain: ''
GRMZM5G878371	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	3	4	2	70.00%	33.33%	10	6	RefGen V2	χ2 p-value for B73 x Mo17: '.8230743' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: ''
GRMZM5G878347	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.464936 x 10^-1	24	20	7	11	54.55%	61.11%	44	18	RefGen V2	χ2 p-value for B73 x Mo17: '.5464936' χ2 p-value for Mo17 x B73: '.3457786' Biased in favor of strain: ''
GRMZM5G878347	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.272436 x 10^-1	37	16	29	25	69.81%	46.30%	53	54	RefGen V2	χ2 p-value for B73 x Mo17: '.6272436' χ2 p-value for Mo17 x B73: '.0014962' Biased in favor of strain: ''
GRMZM5G878322	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.496918 x 10^-1	23	33	12	16	41.07%	57.14%	56	28	RefGen V2	χ2 p-value for B73 x Mo17: '.1814492' χ2 p-value for Mo17 x B73: '.4496918' Biased in favor of strain: ''
GRMZM5G878322	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.913014 x 10^-1	17	5	14	5	77.27%	26.32%	22	19	RefGen V2	χ2 p-value for B73 x Mo17: '.2913014' χ2 p-value for Mo17 x B73: '.0001907' Biased in favor of strain: ''

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