| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G24400 | CIPK8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.71261 x 10-1 | 25 | 2 | 8 | 8 | 92.59% | 50.00% | 27 | 16 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.487039' Avg. expression score for this sample: '207.846' Avg. expression score in LCM sample: '92.641' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G24400 | CIPK8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 13 | 3 | 8 | 9 | 81.25% | 52.94% | 16 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.487039' Avg. expression score for this sample: '128.188' Avg. expression score in LCM sample: '92.641' Tissue used: 'full endosperm' |
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| AT4G24400 | CIPK8 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.7337 x 10-1 | 10 | 0 | 4 | 1 | 100.00% | 20.00% | 10 | 5 | TAIR8 |
Avg. embryo expression (dissected): '118.941' Avg. embryo expression (LCM): '52.52' |
|||
| AT4G24400 | CIPK8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.4249 x 10-2 | 0 | 2 | 0.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24400 | CIPK8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.66579 x 10-1 | 11 | 5 | 68.75% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24400 | CIPK8 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.5308 x 10-2 | 35 | 3 | 92.11% | 38 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24390 | AFB4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 65 | 63 | 31 | 120 | 50.78% | 79.47% | 128 | 151 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.044324' Avg. expression score for this sample: '54.495' Avg. expression score in LCM sample: '43.4617' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G24390 | AFB4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.919 x 10-3 | 150 | 74 | 33 | 175 | 66.96% | 84.13% | 224 | 208 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.044324' Avg. expression score for this sample: '112.854' Avg. expression score in LCM sample: '43.4617' Tissue used: 'full endosperm' |
||||
| AT4G24390 | AFB4 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.99329 x 10-1 | 86 | 126 | 20 | 35 | 40.57% | 63.64% | 212 | 55 | TAIR8 |
Avg. embryo expression (dissected): '90.392' Avg. embryo expression (LCM): '55.6973' |
|||
| AT4G24390 | AFB4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.1363 x 10-2 | 37 | 6 | 86.05% | 43 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24390 | AFB4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.8 x 10-9 | 161 | 14 | 92.00% | 175 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24390 | AFB4 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.1 x 10-8 | 286 | 44 | 86.67% | 330 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24380 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '218.474' Avg. expression score in LCM sample: '25.0159' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G24380 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1584.06' Avg. expression score in LCM sample: '25.0159' Tissue used: 'full endosperm' |
|||||||
| AT4G24380 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '250.473' Avg. embryo expression (LCM): '21.3747' |
||||||
| AT4G24380 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24380 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24380 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24370 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.09859 x 10-1 | 2 | 2 | 3 | 3 | 50.00% | 50.00% | 4 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '12.9803' Avg. expression score in LCM sample: '5.99675' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G24370 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.40405 x 10-1 | 6 | 1 | 1 | 4 | 85.71% | 80.00% | 7 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '37.3601' Avg. expression score in LCM sample: '5.99675' Tissue used: 'full endosperm' |
|||||
| AT4G24370 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 3 | 2 | 2 | 0 | 60.00% | 0.00% | 5 | 2 | TAIR8 |
Avg. embryo expression (dissected): '10.7156' Avg. embryo expression (LCM): '11.9558' |
||||
| AT4G24370 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24370 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.26149 x 10-1 | 2 | 3 | 40.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G24370 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.8921 x 10-2 | 26 | 3 | 89.66% | 29 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G24350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.681659' Avg. expression score for this sample: '1.23991' Avg. expression score in LCM sample: '9.37727' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT4G24350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.4472 x 10-1 | 2 | 2 | 0 | 9 | 50.00% | 100.00% | 4 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.681659' Avg. expression score for this sample: '3.28667' Avg. expression score in LCM sample: '9.37727' Tissue used: 'full endosperm' |
|||||
| AT4G24350 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.81818 x 10-1 | 0 | 5 | 1 | 0 | 0.00% | 0.00% | 5 | 1 | TAIR8 |
Avg. embryo expression (dissected): '1.75123' Avg. embryo expression (LCM): '0' |
||||
| AT4G24350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.22727 x 10-1 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G24350 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.39474 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G24340 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.227913' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G24340 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.158292' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G24340 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT4G24340 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24340 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24340 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24330 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.54622 x 10-1 | 3 | 4 | 5 | 10 | 42.86% | 66.67% | 7 | 15 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.204548' Avg. expression score for this sample: '720.21' Avg. expression score in LCM sample: '399.063' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G24330 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.66298 x 10-1 | 14 | 3 | 17 | 8 | 82.35% | 32.00% | 17 | 25 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.204548' Avg. expression score for this sample: '607.123' Avg. expression score in LCM sample: '399.063' Tissue used: 'full endosperm' |
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| AT4G24330 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.46965 x 10-1 | 8 | 2 | 2 | 0 | 80.00% | 0.00% | 10 | 2 | TAIR8 |
Avg. embryo expression (dissected): '1001.3' Avg. embryo expression (LCM): '659.664' |
||||
| AT4G24330 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 3 | 57.14% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G24330 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.5236 x 10-2 | 16 | 4 | 80.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G24330 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.799 x 10-2 | 18 | 3 | 85.71% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G24320 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '28.2858' Avg. expression score in LCM sample: '29.7192' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G24320 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 1 | 1 | 2 | 66.67% | 66.67% | 3 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '46.5825' Avg. expression score in LCM sample: '29.7192' Tissue used: 'full endosperm' |
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| AT4G24320 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '32.2165' Avg. embryo expression (LCM): '62.4287' |
||||
| AT4G24320 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24320 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G24320 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.86131 x 10-1 | 2 | 5 | 28.57% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G24310 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G24310 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.231365' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G24310 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT4G24310 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24310 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24310 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24300 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G24300 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.83377' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G24300 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT4G24300 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24300 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24300 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.70014 x 10-1 | 46 | 15 | 26 | 21 | 75.41% | 44.68% | 61 | 47 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.033276' Avg. expression score for this sample: '355.877' Avg. expression score in LCM sample: '93.8021' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G24290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.277 x 10-3 | 84 | 25 | 19 | 96 | 77.06% | 83.48% | 109 | 115 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.033276' Avg. expression score for this sample: '437.975' Avg. expression score in LCM sample: '93.8021' Tissue used: 'full endosperm' |
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| AT4G24290 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.80195 x 10-1 | 33 | 26 | 16 | 13 | 55.93% | 44.83% | 59 | 29 | TAIR8 |
Avg. embryo expression (dissected): '388.049' Avg. embryo expression (LCM): '243.9' |
||||
| AT4G24290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.39517 x 10-1 | 21 | 5 | 80.77% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G24290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.2 x 10-8 | 113 | 4 | 96.58% | 117 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G24290 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.7 x 10-17 | 303 | 10 | 96.81% | 313 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G24280 | cpHsc70-1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.19476 x 10-1 | 290 | 183 | 139 | 257 | 61.31% | 64.90% | 473 | 396 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.405814' Avg. expression score for this sample: '1409.51' Avg. expression score in LCM sample: '343.431' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G24280 | cpHsc70-1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.58237 x 10-1 | 149 | 59 | 69 | 141 | 71.63% | 67.14% | 208 | 210 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.405814' Avg. expression score for this sample: '1452.15' Avg. expression score in LCM sample: '343.431' Tissue used: 'full endosperm' |
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| AT4G24280 | cpHsc70-1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.95387 x 10-1 | 400 | 385 | 139 | 117 | 50.96% | 45.70% | 785 | 256 | TAIR8 |
Avg. embryo expression (dissected): '3473.05' Avg. embryo expression (LCM): '2683.06' |
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| AT4G24280 | cpHsc70-1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.031 x 10-3 | 72 | 16 | 81.82% | 88 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24280 | cpHsc70-1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.5 x 10-6 | 90 | 15 | 85.71% | 105 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24280 | cpHsc70-1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.2 x 10-11 | 183 | 29 | 86.32% | 212 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24275 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.90394' Avg. expression score in LCM sample: '2.70442' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G24275 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '10.1287' Avg. expression score in LCM sample: '2.70442' Tissue used: 'full endosperm' |
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| AT4G24275 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.50962' Avg. embryo expression (LCM): '0' |
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| AT4G24275 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24275 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24275 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24270 | EMB140 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.86515 x 10-1 | 83 | 28 | 30 | 66 | 74.77% | 68.75% | 111 | 96 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.181776' Avg. expression score for this sample: '116.302' Avg. expression score in LCM sample: '54.0883' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G24270 | EMB140 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.4082 x 10-1 | 134 | 38 | 57 | 85 | 77.91% | 59.86% | 172 | 142 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.181776' Avg. expression score for this sample: '161.045' Avg. expression score in LCM sample: '54.0883' Tissue used: 'full endosperm' |
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| AT4G24270 | EMB140 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.89083 x 10-1 | 103 | 64 | 32 | 17 | 61.68% | 34.69% | 167 | 49 | TAIR8 |
Avg. embryo expression (dissected): '186.859' Avg. embryo expression (LCM): '198.413' |
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| AT4G24270 | EMB140 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.60465 x 10-1 | 24 | 13 | 64.86% | 37 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24270 | EMB140 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.23548 x 10-1 | 59 | 17 | 77.63% | 76 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24270 | EMB140 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.5 x 10-7 | 142 | 17 | 89.31% | 159 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24265 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '5.12477' Avg. expression score in LCM sample: '2.42516' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G24265 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '6.86944' Avg. expression score in LCM sample: '2.42516' Tissue used: 'full endosperm' |
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| AT4G24265 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.89412' Avg. embryo expression (LCM): '2.07217' |
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| AT4G24265 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24265 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24265 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G24260 | GH9A3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.30769 x 10-1 | 5 | 0 | 0 | 2 | 100.00% | 100.00% | 5 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.020604' Avg. expression score for this sample: '92.9812' Avg. expression score in LCM sample: '67.2724' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G24260 | GH9A3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.32391 x 10-1 | 16 | 0 | 2 | 4 | 100.00% | 66.67% | 16 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.020604' Avg. expression score for this sample: '98.9884' Avg. expression score in LCM sample: '67.2724' Tissue used: 'full endosperm' |
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| AT4G24260 | GH9A3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Avg. embryo expression (dissected): '38.0431' Avg. embryo expression (LCM): '14.8819' |
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| AT4G24260 | GH9A3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24260 | GH9A3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24260 | GH9A3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.00333 x 10-1 | 31 | 1 | 96.88% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G24250 | MLO13 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.23107 x 10-1 | 4 | 7 | 3 | 6 | 36.36% | 66.67% | 11 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '9.18572' Avg. expression score in LCM sample: '5.23246' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G24250 | MLO13 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.7826 x 10-2 | 7 | 0 | 0 | 6 | 100.00% | 100.00% | 7 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.05367' Avg. expression score in LCM sample: '5.23246' Tissue used: 'full endosperm' |
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| AT4G24250 | MLO13 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '1.57186' Avg. embryo expression (LCM): '0' |
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| AT4G24250 | MLO13 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |