Displaying data sets 49401 - 49500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G25020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.6 x 10-6 75 3 17 5 96.15% 22.73% 78 22 TAIR8 Avg. embryo expression (dissected): '126.363'
Avg. embryo expression (LCM): '35.591'
AT4G25020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.067 x 10-3 72 9 88.89% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.44533 x 10-1 708 290 70.94% 998 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.3 x 10-10 979 198 83.18% 1177 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25010 SWEET14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G25010 SWEET14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.262163'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G25010 SWEET14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G25010 SWEET14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25010 SWEET14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25010 SWEET14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25000 AMY1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.85714 x 10-1 0 1 2 1 0.00% 33.33% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.703631'
Avg. expression score for this sample: '126.532'
Avg. expression score in LCM sample: '75.1945'
Tissue used: 'pure endosperm, no chalazal'
AT4G25000 AMY1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 12 4 16 24 75.00% 60.00% 16 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.703631'
Avg. expression score for this sample: '150.169'
Avg. expression score in LCM sample: '75.1945'
Tissue used: 'full endosperm'
AT4G25000 AMY1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.6607'
Avg. embryo expression (LCM): '.8791'
AT4G25000 AMY1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.4041 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25000 AMY1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.13544 x 10-1 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25000 AMY1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.716 x 10-3 32 3 91.43% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24990 ATGP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '183.52'
Avg. expression score in LCM sample: '76.3263'
Tissue used: 'pure endosperm, no chalazal'
AT4G24990 ATGP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '237.534'
Avg. expression score in LCM sample: '76.3263'
Tissue used: 'full endosperm'
AT4G24990 ATGP4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '54.0098'
Avg. embryo expression (LCM): '22.2036'
AT4G24990 ATGP4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24990 ATGP4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24990 ATGP4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24980 UMAMIT16-psi endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.46522'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G24980 UMAMIT16-psi endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.03387'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G24980 UMAMIT16-psi embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '2.38613'
AT4G24980 UMAMIT16-psi endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24980 UMAMIT16-psi endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24980 UMAMIT16-psi endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24975 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G24975 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.44454'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G24975 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G24975 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24975 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24975 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24974 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G24974 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G24974 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G24974 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24974 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24974 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24973 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '3.64508'
Tissue used: 'pure endosperm, no chalazal'
AT4G24973 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.27521'
Avg. expression score in LCM sample: '3.64508'
Tissue used: 'full endosperm'
AT4G24973 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G24973 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24973 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24973 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24972 TPD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.8409'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G24972 TPD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.30804'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G24972 TPD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 3 0 0 25.00% 4 0 TAIR8 Avg. embryo expression (dissected): '41.763'
Avg. embryo expression (LCM): '36.4199'
AT4G24972 TPD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24972 TPD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24972 TPD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.85714 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.3487'
Avg. expression score in LCM sample: '8.59828'
Tissue used: 'pure endosperm, no chalazal'
AT4G24970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.2498'
Avg. expression score in LCM sample: '8.59828'
Tissue used: 'full endosperm'
AT4G24970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '23.6433'
Avg. embryo expression (LCM): '15.8364'
AT4G24970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24960 HVA22D endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '200.135'
Avg. expression score in LCM sample: '7.46654'
Tissue used: 'pure endosperm, no chalazal'
AT4G24960 HVA22D endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '214.269'
Avg. expression score in LCM sample: '7.46654'
Tissue used: 'full endosperm'
AT4G24960 HVA22D embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '99.4108'
Avg. embryo expression (LCM): '156.191'
AT4G24960 HVA22D endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24960 HVA22D endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24960 HVA22D endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G24950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.06001'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G24950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.41522'
Avg. embryo expression (LCM): '0'
AT4G24950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24940 SAE1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.707985'
Avg. expression score for this sample: '45.5675'
Avg. expression score in LCM sample: '39.8607'
Tissue used: 'pure endosperm, no chalazal'
AT4G24940 SAE1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.07985 x 10-1 3 2 2 10 60.00% 83.33% 5 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.707985'
Avg. expression score for this sample: '111.083'
Avg. expression score in LCM sample: '39.8607'
Tissue used: 'full endosperm'
AT4G24940 SAE1A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '75.5795'
Avg. embryo expression (LCM): '79.4832'
AT4G24940 SAE1A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.7719 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24940 SAE1A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24940 SAE1A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.20959 x 10-1 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.84078 x 10-1 12 2 2 5 85.71% 71.43% 14 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.058118'
Avg. expression score for this sample: '716.184'
Avg. expression score in LCM sample: '331.218'
Tissue used: 'pure endosperm, no chalazal'
AT4G24930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.7683 x 10-2 6 0 1 11 100.00% 91.67% 6 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.058118'
Avg. expression score for this sample: '605.585'
Avg. expression score in LCM sample: '331.218'
Tissue used: 'full endosperm'
AT4G24930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.57862 x 10-1 11 7 2 1 61.11% 33.33% 18 3 TAIR8 Avg. embryo expression (dissected): '1255.55'
Avg. embryo expression (LCM): '1821.87'
AT4G24930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.7073 x 10-2 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.72976 x 10-1 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.3781 x 10-1 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.72095 x 10-1 127 41 80 92 75.60% 53.49% 168 172 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.584225'
Avg. expression score for this sample: '283.479'
Avg. expression score in LCM sample: '115.967'
Tissue used: 'pure endosperm, no chalazal'
AT4G24920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.88659 x 10-1 473 75 306 268 86.31% 46.69% 548 574 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.584225'
Avg. expression score for this sample: '646.549'
Avg. expression score in LCM sample: '115.967'
Tissue used: 'full endosperm'
AT4G24920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.016 x 10-3 137 71 21 31 65.87% 59.62% 208 52 TAIR8 Avg. embryo expression (dissected): '314.919'
Avg. embryo expression (LCM): '331.923'
AT4G24920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.6 x 10-7 48 66 42.11% 114 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.06307 x 10-1 113 66 63.13% 179 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.7 x 10-18 217 20 91.56% 237 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 8 0 8 33.33% 100.00% 12 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.033413'
Avg. expression score for this sample: '5.7163'
Avg. expression score in LCM sample: '3.10126'
Tissue used: 'pure endosperm, no chalazal'
AT4G24910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.737 x 10-3 27 3 1 21 90.00% 95.45% 30 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.033413'
Avg. expression score for this sample: '12.8476'
Avg. expression score in LCM sample: '3.10126'
Tissue used: 'full endosperm'
AT4G24910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 12 13 1 4 48.00% 80.00% 25 5 TAIR8 Avg. embryo expression (dissected): '14.8334'
Avg. embryo expression (LCM): '10.612'
AT4G24910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.51448 x 10-1 14 1 93.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.12526 x 10-1 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24900 TTL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.70473 x 10-1 42 31 26 52 57.53% 66.67% 73 78 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.038203'
Avg. expression score for this sample: '29.0425'
Avg. expression score in LCM sample: '8.68647'
Tissue used: 'pure endosperm, no chalazal'
AT4G24900 TTL endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.21 x 10-4 108 22 37 117 83.08% 75.97% 130 154 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.038203'
Avg. expression score for this sample: '32.6826'
Avg. expression score in LCM sample: '8.68647'
Tissue used: 'full endosperm'
AT4G24900 TTL embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.66332 x 10-1 68 52 9 7 56.67% 43.75% 120 16 TAIR8 Avg. embryo expression (dissected): '36.9519'
Avg. embryo expression (LCM): '23.1078'
AT4G24900 TTL endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24900 TTL endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.61111 x 10-1 53 15 77.94% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G24900 TTL endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.17688 x 10-1 44 12 78.57% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'