| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G25340 | FKBP53 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.31434 x 10-1 | 465 | 295 | 185 | 382 | 61.18% | 67.37% | 760 | 567 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.979414' Avg. expression score for this sample: '1711.39' Avg. expression score in LCM sample: '218.955' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G25340 | FKBP53 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.04973 x 10-1 | 401 | 167 | 478 | 1007 | 70.60% | 67.81% | 568 | 1485 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.979414' Avg. expression score for this sample: '1675.19' Avg. expression score in LCM sample: '218.955' Tissue used: 'full endosperm' |
||||
| AT4G25340 | FKBP53 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.18846 x 10-1 | 808 | 882 | 179 | 200 | 47.81% | 52.77% | 1690 | 379 | TAIR8 |
Avg. embryo expression (dissected): '4628.12' Avg. embryo expression (LCM): '3117.91' |
|||
| AT4G25340 | FKBP53 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.662 x 10-3 | 88 | 22 | 80.00% | 110 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G25340 | FKBP53 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0829 x 10-2 | 1811 | 782 | 69.84% | 2593 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G25340 | FKBP53 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.8 x 10-13 | 1903 | 619 | 75.46% | 2522 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G25330 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G25330 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2.46223' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT4G25330 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT4G25330 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G25330 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G25330 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G25320 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.32293 x 10-1 | 527 | 240 | 231 | 477 | 68.71% | 67.37% | 767 | 708 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '5.6e-17' Avg. expression score for this sample: '299.259' Avg. expression score in LCM sample: '75.0182' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G25320 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.0 x 10-22 | 1186 | 294 | 414 | 1269 | 80.14% | 75.40% | 1480 | 1683 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '5.6e-17' Avg. expression score for this sample: '454.462' Avg. expression score in LCM sample: '75.0182' Tissue used: 'full endosperm' |
|||||
| AT4G25320 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.0016 x 10-2 | 568 | 481 | 120 | 135 | 54.15% | 52.94% | 1049 | 255 | TAIR8 |
Avg. embryo expression (dissected): '375.844' Avg. embryo expression (LCM): '317.757' |
||||
| AT4G25320 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 9.35132 x 10-1 | 154 | 53 | 74.40% | 207 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25320 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.605 x 10-3 | 890 | 243 | 78.55% | 1133 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25320 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.7 x 10-26 | 1490 | 232 | 86.53% | 1722 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25315 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 2 | 1 | 5 | 66.67% | 83.33% | 6 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '6.49523' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G25315 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 1 | 4 | 6 | 80.00% | 60.00% | 5 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.72571' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT4G25315 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 5 | 7 | 0 | 0 | 41.67% | 12 | 0 | TAIR8 |
Avg. embryo expression (dissected): '6.90274' Avg. embryo expression (LCM): '7.02024' |
|||||
| AT4G25315 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.15366 x 10-1 | 1 | 3 | 25.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25315 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.6439 x 10-1 | 32 | 21 | 60.38% | 53 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25315 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.26535 x 10-1 | 23 | 4 | 85.19% | 27 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25310 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.4 | 0 | 3 | 0 | 0 | 0.00% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.060606' Avg. expression score for this sample: '1.03472' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT4G25310 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.4 | 0 | 3 | 0 | 0 | 0.00% | 3 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.060606' Avg. expression score for this sample: '.716686' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT4G25310 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.6923 x 10-2 | 0 | 6 | 1 | 0 | 0.00% | 0.00% | 6 | 1 | TAIR8 |
Avg. embryo expression (dissected): '2.36563' Avg. embryo expression (LCM): '0' |
||||
| AT4G25310 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G25310 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.42857 x 10-1 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25310 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G25300 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 9 | 2 | 4 | 7 | 81.82% | 63.64% | 11 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.881384' Avg. expression score for this sample: '6.59167' Avg. expression score in LCM sample: '9.09801' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G25300 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 40 | 9 | 17 | 15 | 81.63% | 46.88% | 49 | 32 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.881384' Avg. expression score for this sample: '13.9964' Avg. expression score in LCM sample: '9.09801' Tissue used: 'full endosperm' |
|||||
| AT4G25300 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.2381 x 10-1 | 1 | 3 | 1 | 0 | 25.00% | 0.00% | 4 | 1 | TAIR8 |
Avg. embryo expression (dissected): '2.27415' Avg. embryo expression (LCM): '.96701' |
||||
| AT4G25300 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25300 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.77 x 10-4 | 26 | 0 | 100.00% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25300 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.2 x 10-9 | 72 | 0 | 100.00% | 72 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 12 | 2 | 5 | 6 | 85.71% | 54.55% | 14 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.707986' Avg. expression score for this sample: '24.0181' Avg. expression score in LCM sample: '13.5515' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G25290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.13738 x 10-1 | 23 | 4 | 8 | 7 | 85.19% | 46.67% | 27 | 15 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.707986' Avg. expression score for this sample: '27.2077' Avg. expression score in LCM sample: '13.5515' Tissue used: 'full endosperm' |
|||||
| AT4G25290 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.77512 x 10-1 | 13 | 6 | 5 | 1 | 68.42% | 16.67% | 19 | 6 | TAIR8 |
Avg. embryo expression (dissected): '35.9554' Avg. embryo expression (LCM): '23.8864' |
||||
| AT4G25290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.57305 x 10-1 | 3 | 3 | 50.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.57305 x 10-1 | 3 | 3 | 50.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25290 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 11 | 4 | 73.33% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25280 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.85714 x 10-1 | 1 | 2 | 1 | 0 | 33.33% | 0.00% | 3 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.372584' Avg. expression score for this sample: '6.50116' Avg. expression score in LCM sample: '3.36582' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G25280 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.07678 x 10-1 | 5 | 4 | 5 | 5 | 55.56% | 50.00% | 9 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.372584' Avg. expression score for this sample: '20.6134' Avg. expression score in LCM sample: '3.36582' Tissue used: 'full endosperm' |
|||||
| AT4G25280 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.2381 x 10-1 | 3 | 1 | 0 | 1 | 75.00% | 100.00% | 4 | 1 | TAIR8 |
Avg. embryo expression (dissected): '10.7575' Avg. embryo expression (LCM): '7.18351' |
||||
| AT4G25280 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.05983 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25280 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.1551 x 10-2 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25280 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.05983 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25270 | OTP70 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.70014 x 10-1 | 40 | 17 | 24 | 27 | 70.18% | 52.94% | 57 | 51 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.558506' Avg. expression score for this sample: '62.1227' Avg. expression score in LCM sample: '33.4231' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G25270 | OTP70 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.93319 x 10-1 | 50 | 17 | 26 | 31 | 74.63% | 54.39% | 67 | 57 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.558506' Avg. expression score for this sample: '62.1229' Avg. expression score in LCM sample: '33.4231' Tissue used: 'full endosperm' |
||||
| AT4G25270 | OTP70 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.4515 x 10-2 | 68 | 34 | 14 | 9 | 66.67% | 39.13% | 102 | 23 | TAIR8 |
Avg. embryo expression (dissected): '105.86' Avg. embryo expression (LCM): '103.922' |
|||
| AT4G25270 | OTP70 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.9636 x 10-2 | 0 | 3 | 0.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G25270 | OTP70 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.325 x 10-3 | 12 | 20 | 37.50% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G25270 | OTP70 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.20562 x 10-1 | 16 | 4 | 80.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G25260 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.32395 x 10-1 | 28 | 10 | 21 | 25 | 73.68% | 54.35% | 38 | 46 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.370516' Avg. expression score for this sample: '74.1572' Avg. expression score in LCM sample: '13.9483' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G25260 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.01757 x 10-1 | 20 | 9 | 12 | 7 | 68.97% | 36.84% | 29 | 19 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.370516' Avg. expression score for this sample: '45.7868' Avg. expression score in LCM sample: '13.9483' Tissue used: 'full endosperm' |
|||||
| AT4G25260 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.22398 x 10-1 | 62 | 32 | 16 | 10 | 65.96% | 38.46% | 94 | 26 | TAIR8 |
Avg. embryo expression (dissected): '132.944' Avg. embryo expression (LCM): '47.6849' |
||||
| AT4G25260 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 4 | 3 | 57.14% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25260 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.22479 x 10-1 | 5 | 5 | 50.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25260 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.6658 x 10-1 | 9 | 4 | 69.23% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25250 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.632344' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G25250 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2.38596' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT4G25250 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '7.71954' Avg. embryo expression (LCM): '0' |
||||||
| AT4G25250 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G25250 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G25250 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G25240 | SKS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.81964 x 10-1 | 11 | 5 | 16 | 13 | 68.75% | 44.83% | 16 | 29 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.076072' Avg. expression score for this sample: '57.9846' Avg. expression score in LCM sample: '91.083' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G25240 | SKS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.24544 x 10-1 | 8 | 6 | 4 | 1 | 57.14% | 20.00% | 14 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.076072' Avg. expression score for this sample: '90.7525' Avg. expression score in LCM sample: '91.083' Tissue used: 'full endosperm' |
||||
| AT4G25240 | SKS1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.28656 x 10-1 | 8 | 11 | 7 | 3 | 42.11% | 30.00% | 19 | 10 | TAIR8 |
Avg. embryo expression (dissected): '47.2693' Avg. embryo expression (LCM): '81.7689' |
|||
| AT4G25240 | SKS1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25240 | SKS1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.37596 x 10-1 | 5 | 2 | 71.43% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G25240 | SKS1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.19735 x 10-1 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G25230 | RIN2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 19 | 8 | 9 | 11 | 70.37% | 55.00% | 27 | 20 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.076279' Avg. expression score for this sample: '58.9814' Avg. expression score in LCM sample: '23.7665' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G25230 | RIN2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.2033 x 10-2 | 42 | 13 | 6 | 43 | 76.36% | 87.76% | 55 | 49 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.076279' Avg. expression score for this sample: '63.6607' Avg. expression score in LCM sample: '23.7665' Tissue used: 'full endosperm' |
||||
| AT4G25230 | RIN2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 10 | 10 | 4 | 2 | 50.00% | 33.33% | 20 | 6 | TAIR8 |
Avg. embryo expression (dissected): '61.3886' Avg. embryo expression (LCM): '26.5991' |
|||
| AT4G25230 | RIN2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.3439 x 10-1 | 11 | 2 | 84.62% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G25230 | RIN2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.7845 x 10-2 | 48 | 5 | 90.57% | 53 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G25230 | RIN2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.2 x 10-5 | 149 | 10 | 93.71% | 159 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G25225 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.02562 x 10-1 | 13 | 3 | 6 | 13 | 81.25% | 68.42% | 16 | 19 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.579184' Avg. expression score for this sample: '74.1261' Avg. expression score in LCM sample: '27.588' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G25225 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 10 | 2 | 8 | 14 | 83.33% | 63.64% | 12 | 22 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.579184' Avg. expression score for this sample: '48.7159' Avg. expression score in LCM sample: '27.588' Tissue used: 'full endosperm' |
|||||
| AT4G25225 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.28308 x 10-1 | 7 | 4 | 0 | 2 | 63.64% | 100.00% | 11 | 2 | TAIR8 |
Avg. embryo expression (dissected): '40.4343' Avg. embryo expression (LCM): '33.6695' |
||||
| AT4G25225 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.8857 x 10-1 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25225 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.7877 x 10-2 | 17 | 19 | 47.22% | 36 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25225 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.448 x 10-3 | 24 | 0 | 100.00% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25220 | G3Pp2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 2 | 3 | 100.00% | 60.00% | 3 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.069264' Avg. expression score for this sample: '10.0532' Avg. expression score in LCM sample: '1.67556' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G25220 | G3Pp2 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.8081 x 10-2 | 14 | 22 | 3 | 3 | 38.89% | 50.00% | 36 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.069264' Avg. expression score for this sample: '34.4345' Avg. expression score in LCM sample: '1.67556' Tissue used: 'full endosperm' |
||||
| AT4G25220 | G3Pp2 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.31857 x 10-1 | 9 | 7 | 0 | 1 | 56.25% | 100.00% | 16 | 1 | TAIR8 |
Avg. embryo expression (dissected): '11.9141' Avg. embryo expression (LCM): '3.59175' |
|||
| AT4G25220 | G3Pp2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G25220 | G3Pp2 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.80115 x 10-1 | 20 | 15 | 57.14% | 35 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G25220 | G3Pp2 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.4605 x 10-2 | 23 | 9 | 71.88% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G25210 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '195.907' Avg. expression score in LCM sample: '87.3203' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G25210 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '555.145' Avg. expression score in LCM sample: '87.3203' Tissue used: 'full endosperm' |
|||||||
| AT4G25210 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '279.658' Avg. embryo expression (LCM): '333.945' |
||||||
| AT4G25210 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G25210 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G25210 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G25200 | HSP23.6-MITO | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1382.21' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT4G25200 | HSP23.6-MITO | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '797.102' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
||||||
| AT4G25200 | HSP23.6-MITO | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2357.08' Avg. embryo expression (LCM): '0' |
|||||
| AT4G25200 | HSP23.6-MITO | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |