Displaying data sets 49001 - 49100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G25630 FIB2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.19503 x 10-1 15 7 68.18% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25630 FIB2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.00005 x 10-1 65 43 60.19% 108 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.209 x 10-3 36 3 92.31% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.97878 x 10-1 31 20 24 63 60.78% 72.41% 51 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.372287'
Avg. expression score for this sample: '1205.07'
Avg. expression score in LCM sample: '604.29'
Tissue used: 'pure endosperm, no chalazal'
AT4G25620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.46235 x 10-1 73 35 26 80 67.59% 75.47% 108 106 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.372287'
Avg. expression score for this sample: '652.683'
Avg. expression score in LCM sample: '604.29'
Tissue used: 'full endosperm'
AT4G25620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 2 2 2 60.00% 50.00% 5 4 TAIR8 Avg. embryo expression (dissected): '200.641'
Avg. embryo expression (LCM): '22.0654'
AT4G25620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.86035 x 10-1 18 5 78.26% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.74319 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0423 56 42 57.14% 98 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 4 2 11 50.00% 84.62% 8 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.432657'
Avg. expression score for this sample: '131.333'
Avg. expression score in LCM sample: '61.8929'
Tissue used: 'pure endosperm, no chalazal'
AT4G25610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.67006 x 10-1 18 6 4 13 75.00% 76.47% 24 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.432657'
Avg. expression score for this sample: '131.395'
Avg. expression score in LCM sample: '61.8929'
Tissue used: 'full endosperm'
AT4G25610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 3 4 5 3 42.86% 37.50% 7 8 TAIR8 Avg. embryo expression (dissected): '124.136'
Avg. embryo expression (LCM): '72.1114'
AT4G25610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 162 57 73.97% 219 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-8 110 5 95.65% 115 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.58552 x 10-1 44 5 29 15 89.80% 34.09% 49 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.219849'
Avg. expression score for this sample: '156.146'
Avg. expression score in LCM sample: '87.5849'
Tissue used: 'pure endosperm, no chalazal'
AT4G25600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.463 x 10-2 80 5 35 51 94.12% 59.30% 85 86 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.219849'
Avg. expression score for this sample: '105.311'
Avg. expression score in LCM sample: '87.5849'
Tissue used: 'full endosperm'
AT4G25600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 24 15 13 4 61.54% 23.53% 39 17 TAIR8 Avg. embryo expression (dissected): '117.051'
Avg. embryo expression (LCM): '113.869'
AT4G25600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.8985 x 10-2 44 8 84.62% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.037 x 10-3 44 5 89.80% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25590 ADF7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25590 ADF7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.50455'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G25590 ADF7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.62267'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G25590 ADF7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.98069'
Avg. embryo expression (LCM): '0'
AT4G25590 ADF7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25590 ADF7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25585 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25585 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G25585 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G25585 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G25585 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25585 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.41923'
Avg. expression score in LCM sample: '1.36691'
Tissue used: 'pure endosperm, no chalazal'
AT4G25580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.06346'
Avg. expression score in LCM sample: '1.36691'
Tissue used: 'full endosperm'
AT4G25580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '11.4459'
Avg. embryo expression (LCM): '0'
AT4G25580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25570 ACYB-2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25570 ACYB-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '100.25'
Avg. expression score in LCM sample: '12.9489'
Tissue used: 'pure endosperm, no chalazal'
AT4G25570 ACYB-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '136.878'
Avg. expression score in LCM sample: '12.9489'
Tissue used: 'full endosperm'
AT4G25570 ACYB-2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '313.219'
Avg. embryo expression (LCM): '56.5262'
AT4G25570 ACYB-2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25570 ACYB-2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25560 LAF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25560 LAF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G25560 LAF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.202381'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G25560 LAF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G25560 LAF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25560 LAF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '165.155'
Avg. expression score in LCM sample: '96.6535'
Tissue used: 'pure endosperm, no chalazal'
AT4G25550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '143.767'
Avg. expression score in LCM sample: '96.6535'
Tissue used: 'full endosperm'
AT4G25550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '311.887'
Avg. embryo expression (LCM): '495.536'
AT4G25550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25540 MSH3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.86466 x 10-1 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25540 MSH3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 6 1 0 1 85.71% 100.00% 7 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.134614'
Avg. expression score for this sample: '22.9057'
Avg. expression score in LCM sample: '29.1901'
Tissue used: 'pure endosperm, no chalazal'
AT4G25540 MSH3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.82043 x 10-1 6 1 0 3 85.71% 100.00% 7 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.134614'
Avg. expression score for this sample: '22.5126'
Avg. expression score in LCM sample: '29.1901'
Tissue used: 'full endosperm'
AT4G25540 MSH3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.2508 x 10-2 0 7 3 0 0.00% 0.00% 7 3 TAIR8 Avg. embryo expression (dissected): '18.1297'
Avg. embryo expression (LCM): '31.0825'
AT4G25540 MSH3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25540 MSH3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.1018 x 10-2 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25530 FWA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25530 FWA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '8.75965'
Avg. expression score in LCM sample: '7.83399'
Tissue used: 'pure endosperm, no chalazal'
AT4G25530 FWA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444444'
Avg. expression score for this sample: '2.98041'
Avg. expression score in LCM sample: '7.83399'
Tissue used: 'full endosperm'
AT4G25530 FWA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.476328'
Avg. embryo expression (LCM): '3.08941'
AT4G25530 FWA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.7619 x 10-2 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25530 FWA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 333 1 99.70% 334 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25520 SLK1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-5 415 98 80.90% 513 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25520 SLK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 80 38 52 101 67.80% 66.01% 118 153 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.226748'
Avg. expression score for this sample: '180.446'
Avg. expression score in LCM sample: '77.5021'
Tissue used: 'pure endosperm, no chalazal'
AT4G25520 SLK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.24378 x 10-1 132 46 54 129 74.16% 70.49% 178 183 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.226748'
Avg. expression score for this sample: '205.301'
Avg. expression score in LCM sample: '77.5021'
Tissue used: 'full endosperm'
AT4G25520 SLK1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 71 61 32 24 53.79% 42.86% 132 56 TAIR8 Avg. embryo expression (dissected): '252.55'
Avg. embryo expression (LCM): '125.033'
AT4G25520 SLK1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.7 x 10-5 73 7 91.25% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25520 SLK1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.1 x 10-6 256 49 83.93% 305 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25515 SLK3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.8379 x 10-1 19 6 5 14 76.00% 73.68% 25 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.562838'
Avg. expression score for this sample: '42.946'
Avg. expression score in LCM sample: '7.92218'
Tissue used: 'pure endosperm, no chalazal'
AT4G25515 SLK3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.54709 x 10-1 24 12 9 23 66.67% 71.88% 36 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.562838'
Avg. expression score for this sample: '49.9741'
Avg. expression score in LCM sample: '7.92218'
Tissue used: 'full endosperm'
AT4G25515 SLK3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.49677 x 10-1 9 17 6 5 34.62% 45.45% 26 11 TAIR8 Avg. embryo expression (dissected): '69.6203'
Avg. embryo expression (LCM): '47.4212'
AT4G25515 SLK3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25515 SLK3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.9 x 10-6 46 0 100.00% 46 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25515 SLK3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.8751 x 10-2 28 4 87.50% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G25510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.72308'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G25510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.29608'
Avg. embryo expression (LCM): '5.60113'
AT4G25510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25500 RS40 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 3 1 2 57.14% 66.67% 7 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '687.4'
Avg. expression score in LCM sample: '176.684'
Tissue used: 'pure endosperm, no chalazal'
AT4G25500 RS40 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 22 9 12 23 70.97% 65.71% 31 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '587.208'
Avg. expression score in LCM sample: '176.684'
Tissue used: 'full endosperm'
AT4G25500 RS40 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 2 1 1 66.67% 50.00% 6 2 TAIR8 Avg. embryo expression (dissected): '1132.88'
Avg. embryo expression (LCM): '575.133'
AT4G25500 RS40 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.34385 x 10-1 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25500 RS40 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8434 x 10-2 22 2 91.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25500 RS40 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.989 x 10-3 43 4 91.49% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25490 CBF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 1 1 50.00% 50.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.677617'
Avg. expression score for this sample: '44.9872'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G25490 CBF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.1 0 0 0 8 100.00% 0 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.677617'
Avg. expression score for this sample: '58.192'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G25490 CBF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 3.34842 x 10-1 7 2 0 0 77.78% 9 0 TAIR8 Avg. embryo expression (dissected): '25.0974'
Avg. embryo expression (LCM): '0'
AT4G25490 CBF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.45 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25490 CBF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25490 CBF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25480 DREB1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.569924'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G25480 DREB1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.368532'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'