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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G25730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '302.696'
Avg. expression score in LCM sample: '49.8112'
Tissue used: 'pure endosperm, no chalazal'
AT4G25730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '389.389'
Avg. expression score in LCM sample: '49.8112'
Tissue used: 'full endosperm'
AT4G25730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '800.178'
Avg. embryo expression (LCM): '930'
AT4G25730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25720 QC endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.467 x 10-3 138 15 90.20% 153 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25720 QC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.20169 x 10-1 23 7 6 9 76.67% 60.00% 30 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.027431'
Avg. expression score for this sample: '46.4748'
Avg. expression score in LCM sample: '28.852'
Tissue used: 'pure endosperm, no chalazal'
AT4G25720 QC endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7558 x 10-2 39 3 16 44 92.86% 73.33% 42 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.027431'
Avg. expression score for this sample: '64.0576'
Avg. expression score in LCM sample: '28.852'
Tissue used: 'full endosperm'
AT4G25720 QC embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.9799 x 10-2 11 4 0 3 73.33% 100.00% 15 3 TAIR8 Avg. embryo expression (dissected): '38.6826'
Avg. embryo expression (LCM): '23.1078'
AT4G25720 QC endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.30719 x 10-1 6 5 54.55% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25720 QC endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2648 x 10-2 108 55 66.26% 163 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25719 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25719 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '80.7679'
Avg. expression score in LCM sample: '42.7562'
Tissue used: 'pure endosperm, no chalazal'
AT4G25719 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '91.384'
Avg. expression score in LCM sample: '42.7562'
Tissue used: 'full endosperm'
AT4G25719 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '68.8389'
Avg. embryo expression (LCM): '27.4028'
AT4G25719 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25719 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.202 x 10-3 241 38 86.38% 279 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.39241 x 10-1 87 13 33 36 87.00% 52.17% 100 69 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014005'
Avg. expression score for this sample: '178.435'
Avg. expression score in LCM sample: '75.077'
Tissue used: 'pure endosperm, no chalazal'
AT4G25710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9178 x 10-2 87 7 24 30 92.55% 55.56% 94 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014005'
Avg. expression score for this sample: '112.233'
Avg. expression score in LCM sample: '75.077'
Tissue used: 'full endosperm'
AT4G25710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.4926 x 10-2 113 67 20 14 62.78% 41.18% 180 34 TAIR8 Avg. embryo expression (dissected): '263.487'
Avg. embryo expression (LCM): '176.184'
AT4G25710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.24209 x 10-1 8 6 57.14% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6 x 10-13 126 147 46.15% 273 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25707 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25707 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '12.7111'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G25707 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.0948'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G25707 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '49.2417'
Avg. embryo expression (LCM): '0'
AT4G25707 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25707 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25700 BETA-OHASE 1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.79069 x 10-1 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25700 BETA-OHASE 1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 1 0 0 80.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.287107'
Avg. expression score for this sample: '50.088'
Avg. expression score in LCM sample: '36.6566'
Tissue used: 'pure endosperm, no chalazal'
AT4G25700 BETA-OHASE 1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.57394 x 10-1 8 4 2 18 66.67% 90.00% 12 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.287107'
Avg. expression score for this sample: '50.5425'
Avg. expression score in LCM sample: '36.6566'
Tissue used: 'full endosperm'
AT4G25700 BETA-OHASE 1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '53.8673'
Avg. embryo expression (LCM): '21.9273'
AT4G25700 BETA-OHASE 1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25700 BETA-OHASE 1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.94788 x 10-1 25 3 89.29% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25692 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.82043 x 10-1 7 3 70.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25692 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.582043'
Avg. expression score for this sample: '51.0957'
Avg. expression score in LCM sample: '7.40775'
Tissue used: 'pure endosperm, no chalazal'
AT4G25692 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.23077 x 10-1 5 0 1 2 100.00% 66.67% 5 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.582043'
Avg. expression score for this sample: '70.7824'
Avg. expression score in LCM sample: '7.40775'
Tissue used: 'full endosperm'
AT4G25692 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '35.0789'
Avg. embryo expression (LCM): '4.74714'
AT4G25692 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25692 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 2 1 100.00% 33.33% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '41.148'
Avg. expression score in LCM sample: '5.55581'
Tissue used: 'pure endosperm, no chalazal'
AT4G25690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.81659 x 10-1 4 1 2 8 80.00% 80.00% 5 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '64.7195'
Avg. expression score in LCM sample: '5.55581'
Tissue used: 'full endosperm'
AT4G25690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '21.6347'
Avg. embryo expression (LCM): '6.31696'
AT4G25690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '92.5737'
Avg. expression score in LCM sample: '31.2478'
Tissue used: 'pure endosperm, no chalazal'
AT4G25680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '118.471'
Avg. expression score in LCM sample: '31.2478'
Tissue used: 'full endosperm'
AT4G25680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '101.389'
Avg. embryo expression (LCM): '70.8555'
AT4G25680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25672 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3 x 10-13 223 11 95.30% 234 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25672 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.38537 x 10-1 27 9 18 44 75.00% 70.97% 36 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.049582'
Avg. expression score for this sample: '8410.02'
Avg. expression score in LCM sample: '657.35'
Tissue used: 'pure endosperm, no chalazal'
AT4G25672 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.3498 x 10-2 100 28 48 112 78.12% 70.00% 128 160 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.049582'
Avg. expression score for this sample: '6098.57'
Avg. expression score in LCM sample: '657.35'
Tissue used: 'full endosperm'
AT4G25672 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.67472 x 10-1 17 13 2 8 56.67% 80.00% 30 10 TAIR8 Avg. embryo expression (dissected): '4119.23'
Avg. embryo expression (LCM): '1912.18'
AT4G25672 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 27 9 75.00% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25672 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.81951 x 10-1 118 31 79.19% 149 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8 x 10-15 267 14 95.02% 281 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.23857 x 10-1 31 11 15 35 73.81% 70.00% 42 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.061231'
Avg. expression score for this sample: '8093.59'
Avg. expression score in LCM sample: '775.521'
Tissue used: 'pure endosperm, no chalazal'
AT4G25670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.9889 x 10-2 121 27 62 121 81.76% 66.12% 148 183 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.061231'
Avg. expression score for this sample: '5873.15'
Avg. expression score in LCM sample: '775.521'
Tissue used: 'full endosperm'
AT4G25670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.5536 x 10-1 24 21 1 6 53.33% 85.71% 45 7 TAIR8 Avg. embryo expression (dissected): '3870.4'
Avg. embryo expression (LCM): '1621.89'
AT4G25670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.50927 x 10-1 31 8 79.49% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.61632 x 10-1 106 30 77.94% 136 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0 x 10-10 267 25 91.44% 292 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 53 25 23 46 67.95% 66.67% 78 69 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010654'
Avg. expression score for this sample: '141.22'
Avg. expression score in LCM sample: '56.0285'
Tissue used: 'pure endosperm, no chalazal'
AT4G25660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.031 x 10-3 129 51 39 166 71.67% 80.98% 180 205 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010654'
Avg. expression score for this sample: '222.004'
Avg. expression score in LCM sample: '56.0285'
Tissue used: 'full endosperm'
AT4G25660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.92991 x 10-1 12 22 7 5 35.29% 41.67% 34 12 TAIR8 Avg. embryo expression (dissected): '82.6294'
Avg. embryo expression (LCM): '41.7573'
AT4G25660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.83733 x 10-1 24 5 82.76% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.905 x 10-2 205 46 81.67% 251 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25650 ACD1-LIKE endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.9 x 10-6 47 3 94.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25650 ACD1-LIKE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.71543 x 10-1 51 20 32 30 71.83% 48.39% 71 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.505119'
Avg. expression score for this sample: '934.951'
Avg. expression score in LCM sample: '515.427'
Tissue used: 'pure endosperm, no chalazal'
AT4G25650 ACD1-LIKE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 45 12 25 27 78.95% 51.92% 57 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.505119'
Avg. expression score for this sample: '1054.92'
Avg. expression score in LCM sample: '515.427'
Tissue used: 'full endosperm'
AT4G25650 ACD1-LIKE embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.94185 x 10-1 46 23 16 12 66.67% 42.86% 69 28 TAIR8 Avg. embryo expression (dissected): '1196.95'
Avg. embryo expression (LCM): '640.01'
AT4G25650 ACD1-LIKE endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25650 ACD1-LIKE endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.51255 x 10-1 34 30 53.12% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25640 DTX35 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 6369 112 98.27% 6481 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25640 DTX35 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.0 x 10-16 500 92 64 261 84.46% 80.31% 592 325 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '210.099'
Avg. expression score in LCM sample: '60.1145'
Tissue used: 'pure endosperm, no chalazal'
AT4G25640 DTX35 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1591 242 218 1214 86.80% 84.78% 1833 1432 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '585.543'
Avg. expression score in LCM sample: '60.1145'
Tissue used: 'full endosperm'
AT4G25640 DTX35 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.43222 x 10-1 450 399 117 112 53.00% 48.91% 849 229 TAIR8 Avg. embryo expression (dissected): '400.037'
Avg. embryo expression (LCM): '225.841'
AT4G25640 DTX35 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.34141 x 10-1 472 66 87.73% 538 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25640 DTX35 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1587 43 97.36% 1630 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25635 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25635 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G25635 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.71943'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G25635 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G25635 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25635 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25631 U60.2F endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25631 U60.2F endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G25631 U60.2F endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G25631 U60.2F embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G25631 U60.2F endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25631 U60.2F endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25630 FIB2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.6 x 10-7 77 7 91.67% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G25630 FIB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 48 16 27 38 75.00% 58.46% 64 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.768642'
Avg. expression score for this sample: '444.411'
Avg. expression score in LCM sample: '204.654'
Tissue used: 'pure endosperm, no chalazal'
AT4G25630 FIB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.60433 x 10-1 17 10 28 47 62.96% 62.67% 27 75 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.768642'
Avg. expression score for this sample: '175.513'
Avg. expression score in LCM sample: '204.654'
Tissue used: 'full endosperm'
AT4G25630 FIB2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.4053 x 10-2 211 140 26 12 60.11% 31.58% 351 38 TAIR8 Avg. embryo expression (dissected): '1728.84'
Avg. embryo expression (LCM): '3855.01'