| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G431314 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.123172 x 10-1 | 283 | 254 | 266 | 238 | 52.70% | 47.22% | 537 | 504 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2107731' χ2 p-value for Mo17 x B73: '.2123172' Biased in favor of strain: '' |
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| GRMZM2G431314 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.193 x 10-4 | 529 | 182 | 246 | 373 | 74.40% | 60.26% | 711 | 619 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000121' χ2 p-value for Mo17 x B73: '.0007193' Biased in favor of strain: 'B73' |
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| GRMZM2G431309 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.80883 x 10-2 | 355 | 191 | 206 | 166 | 65.02% | 44.62% | 546 | 372 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.24e-12' χ2 p-value for Mo17 x B73: '.0380883' Biased in favor of strain: 'B73' |
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| GRMZM2G431309 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.499065 x 10-1 | 646 | 298 | 424 | 610 | 68.43% | 58.99% | 944 | 1034 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2499065' χ2 p-value for Mo17 x B73: '1.66e-07' Biased in favor of strain: '' |
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| GRMZM2G431306 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.75 x 10-17 | 529 | 290 | 589 | 255 | 64.59% | 30.21% | 819 | 844 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.75e-17' χ2 p-value for Mo17 x B73: '1.37e-30' Biased in favor of strain: 'B73' |
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| GRMZM2G431306 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.26198 x 10-2 | 340 | 137 | 219 | 286 | 71.28% | 56.63% | 477 | 505 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0326198' χ2 p-value for Mo17 x B73: '1.73e-06' Biased in favor of strain: '' |
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| GRMZM2G431251 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.66579 x 10-2 | 259 | 191 | 213 | 172 | 57.56% | 44.68% | 450 | 385 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.001348' χ2 p-value for Mo17 x B73: '.0366579' Biased in favor of strain: 'B73' |
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| GRMZM2G431251 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.295702 x 10-1 | 200 | 82 | 100 | 164 | 70.92% | 62.12% | 282 | 264 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1295702' χ2 p-value for Mo17 x B73: '.1171849' Biased in favor of strain: '' |
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| GRMZM2G431243 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.023452 x 10-1 | 197 | 202 | 179 | 150 | 49.37% | 45.59% | 399 | 329 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8023452' χ2 p-value for Mo17 x B73: '.1098602' Biased in favor of strain: '' |
||||
| GRMZM2G431243 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.5795 x 10-3 | 290 | 106 | 246 | 340 | 73.23% | 58.02% | 396 | 586 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0055795' χ2 p-value for Mo17 x B73: '9.00e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G431157 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.145968 x 10-1 | 102 | 65 | 82 | 63 | 61.08% | 43.45% | 167 | 145 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0041946' χ2 p-value for Mo17 x B73: '.1145968' Biased in favor of strain: '' |
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| GRMZM2G431157 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 6 | 4 | 7 | 25.00% | 63.64% | 8 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0124186' χ2 p-value for Mo17 x B73: '.8311703' Biased in favor of strain: '' |
|||||
| GRMZM2G431156 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.36383 x 10-2 | 14 | 6 | 29 | 9 | 70.00% | 23.68% | 20 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0736383' χ2 p-value for Mo17 x B73: '.0011769' Biased in favor of strain: '' |
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| GRMZM2G431156 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 1 | 19 | 4 | 88.89% | 17.39% | 9 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.157302' χ2 p-value for Mo17 x B73: '5.36e-07' Biased in favor of strain: '' |
|||||
| GRMZM2G431114 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 4 | 0 | 100.00% | 0.00% | 1 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G431114 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G430807 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 x 10-30 | 265 | 58 | 191 | 18 | 82.04% | 8.61% | 323 | 209 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.07e-30' χ2 p-value for Mo17 x B73: '5.31e-33' Biased in favor of strain: 'B73' |
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| GRMZM2G430807 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.5516 x 10-3 | 17 | 0 | 16 | 0 | 100.00% | 0.00% | 17 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0035516' χ2 p-value for Mo17 x B73: '1.54e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G430710 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 14 | 24 | 15 | 15 | 36.84% | 50.00% | 38 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1047575' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G430710 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.743669 x 10-1 | 8 | 11 | 7 | 13 | 42.11% | 65.00% | 19 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0231392' χ2 p-value for Mo17 x B73: '.8743669' Biased in favor of strain: '' |
||||
| GRMZM2G430685 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 464 | 103 | 461 | 135 | 81.83% | 22.65% | 567 | 596 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G430685 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.046716 x 10-1 | 624 | 143 | 264 | 466 | 81.36% | 63.84% | 767 | 730 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.15e-18' χ2 p-value for Mo17 x B73: '.1046716' Biased in favor of strain: '' |
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| GRMZM2G430646 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.443998 x 10-1 | 8 | 15 | 6 | 17 | 34.78% | 73.91% | 23 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1443998' χ2 p-value for Mo17 x B73: '.0218101' Biased in favor of strain: '' |
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| GRMZM2G430646 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 6 | 0.00% | 100.00% | 1 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G430623 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G430623 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 3 | 0.00% | 100.00% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G430604 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G430604 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 14 | 0 | 0 | 0 | 100.00% | 14 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G430601 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G430601 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 0 | 0 | 100.00% | 5 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G430600 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5507 x 10-3 | 172 | 100 | 139 | 91 | 63.24% | 39.57% | 272 | 230 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000127' χ2 p-value for Mo17 x B73: '.0015507' Biased in favor of strain: 'B73' |
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| GRMZM2G430600 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.733361 x 10-1 | 44 | 16 | 59 | 58 | 73.33% | 49.57% | 60 | 117 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2733361' χ2 p-value for Mo17 x B73: '.0000877' Biased in favor of strain: '' |
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| GRMZM2G430522 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.039 | 30 | 16 | 45 | 11 | 65.22% | 19.64% | 46 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.039' χ2 p-value for Mo17 x B73: '5.53e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G430522 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G430411 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.457786 x 10-1 | 11 | 7 | 13 | 6 | 61.11% | 31.58% | 18 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3457786' χ2 p-value for Mo17 x B73: '.1082937' Biased in favor of strain: '' |
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| GRMZM2G430411 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.357409 x 10-1 | 51 | 26 | 20 | 58 | 66.23% | 74.36% | 77 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9357409' χ2 p-value for Mo17 x B73: '.1495415' Biased in favor of strain: '' |
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| GRMZM2G430392 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.840882 x 10-1 | 24 | 12 | 19 | 14 | 66.67% | 42.42% | 36 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.3840882' Biased in favor of strain: '' |
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| GRMZM2G430392 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 1 | 0 | 50.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G430390 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 6 | 4 | 2 | 50.00% | 33.33% | 12 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G430390 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G430362 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.49549 x 10-2 | 155 | 123 | 127 | 75 | 55.76% | 37.13% | 278 | 202 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0549549' χ2 p-value for Mo17 x B73: '.0002535' Biased in favor of strain: '' |
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| GRMZM2G430362 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.681301 x 10-1 | 60 | 35 | 98 | 76 | 63.16% | 43.68% | 95 | 174 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4681301' χ2 p-value for Mo17 x B73: '1.25e-10' Biased in favor of strain: '' |
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| GRMZM2G430266 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.57 x 10-4 | 310 | 194 | 225 | 159 | 61.51% | 41.41% | 504 | 384 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.38e-07' χ2 p-value for Mo17 x B73: '.000757' Biased in favor of strain: 'B73' |
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| GRMZM2G430266 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.77 x 10-5 | 97 | 18 | 106 | 54 | 84.35% | 33.75% | 115 | 160 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000577' χ2 p-value for Mo17 x B73: '1.02e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G430039 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.071291 x 10-1 | 672 | 763 | 961 | 925 | 46.83% | 49.05% | 1435 | 1886 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0162952' χ2 p-value for Mo17 x B73: '.4071291' Biased in favor of strain: '' |
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| GRMZM2G430039 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.042288 x 10-1 | 28 | 18 | 33 | 17 | 60.87% | 34.00% | 46 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4042288' χ2 p-value for Mo17 x B73: '9.58e-07' Biased in favor of strain: '' |
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| GRMZM2G430029 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 0 | 1 | 83.33% | 100.00% | 6 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G430029 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 2 | 100.00% | 50.00% | 1 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G430027 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 4 | 0 | 1 | 42.86% | 100.00% | 7 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G430027 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 2 | 0 | 1 | 66.67% | 100.00% | 6 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999887' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G429972 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1366 | 183 | 1341 | 224 | 88.19% | 14.31% | 1549 | 1565 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G429972 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1489 | 74 | 699 | 121 | 95.27% | 14.76% | 1563 | 820 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G429940 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.06753 x 10-2 | 317 | 378 | 336 | 399 | 45.61% | 54.29% | 695 | 735 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0206753' χ2 p-value for Mo17 x B73: '.0201368' Biased in favor of strain: 'Mo17' |
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| GRMZM2G429940 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.254094 x 10-1 | 19 | 12 | 31 | 32 | 61.29% | 50.79% | 31 | 63 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5254094' χ2 p-value for Mo17 x B73: '.0075263' Biased in favor of strain: '' |
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| GRMZM2G429928 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 1 | 2 | 66.67% | 66.67% | 3 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G429928 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 5 | 5 | 3 | 68.75% | 37.50% | 16 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8596982' χ2 p-value for Mo17 x B73: '.0801183' Biased in favor of strain: '' |
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| GRMZM2G429899 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 6622 | 2208 | 1258 | 3805 | 74.99% | 75.15% | 8830 | 5063 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G429899 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | maternally biased | 0.0 | 129987 | 53850 | 24288 | 93757 | 70.71% | 79.42% | 183837 | 118045 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G429873 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 1 | 0 | 100.00% | 0.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G429873 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 11 | 0 | 0.00% | 0 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G429842 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.6 x 10-9 | 222 | 113 | 261 | 124 | 66.27% | 32.21% | 335 | 385 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.60e-09' χ2 p-value for Mo17 x B73: '2.91e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G429842 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G429807 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.17 x 10-7 | 57 | 7 | 56 | 14 | 89.06% | 20.00% | 64 | 70 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.10e-10' χ2 p-value for Mo17 x B73: '5.17e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G429807 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.15 x 10-15 | 165 | 10 | 117 | 11 | 94.29% | 8.59% | 175 | 128 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.15e-15' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G429759 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.987251 x 10-1 | 62 | 68 | 61 | 52 | 47.69% | 46.02% | 130 | 113 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5987251' χ2 p-value for Mo17 x B73: '.3971909' Biased in favor of strain: '' |
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| GRMZM2G429759 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.415062 x 10-1 | 34 | 16 | 15 | 38 | 68.00% | 71.70% | 50 | 53 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8415062' χ2 p-value for Mo17 x B73: '.437142' Biased in favor of strain: '' |
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| GRMZM2G429714 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.81691 x 10-2 | 53 | 17 | 25 | 14 | 75.71% | 35.90% | 70 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000169' χ2 p-value for Mo17 x B73: '.0781691' Biased in favor of strain: '' |
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| GRMZM2G429714 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.13 x 10-6 | 96 | 13 | 57 | 37 | 88.07% | 39.36% | 109 | 94 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.13e-06' χ2 p-value for Mo17 x B73: '1.96e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G429658 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.9049 x 10-2 | 16 | 5 | 13 | 4 | 76.19% | 23.53% | 21 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0163773' χ2 p-value for Mo17 x B73: '.029049' Biased in favor of strain: 'B73' |
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| GRMZM2G429658 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 5 | 100.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G429617 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.547208 x 10-1 | 11 | 9 | 7 | 12 | 55.00% | 63.16% | 20 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '.2513491' Biased in favor of strain: '' |
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| GRMZM2G429617 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 0 | 0 | 100.00% | 8 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G429533 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G429533 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 17 | 0 | 100.00% | 0.00% | 5 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '5.51e-09' Biased in favor of strain: '' |
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| GRMZM2G429378 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 2 | 0.00% | 66.67% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G429378 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 5 | 4 | 14 | 16.67% | 77.78% | 6 | 18 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0093742' χ2 p-value for Mo17 x B73: '.3173106' Biased in favor of strain: '' |
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| GRMZM2G429254 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.547208 x 10-1 | 17 | 10 | 11 | 9 | 62.96% | 45.00% | 27 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1779317' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G429254 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 1 | 1 | 100.00% | 50.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G429237 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 x 10-30 | 143 | 2 | 140 | 2 | 98.62% | 1.41% | 145 | 142 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.14e-31' χ2 p-value for Mo17 x B73: '5.16e-31' Biased in favor of strain: 'B73' |
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| GRMZM2G429237 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 348 | 2 | 196 | 0 | 99.43% | 0.00% | 350 | 196 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.19e-38' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G429213 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5 x 10-21 | 132 | 16 | 127 | 6 | 89.19% | 4.51% | 148 | 133 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.50e-21' χ2 p-value for Mo17 x B73: '9.40e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G429213 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.44 x 10-6 | 87 | 11 | 52 | 21 | 88.78% | 28.77% | 98 | 73 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.44e-06' χ2 p-value for Mo17 x B73: '6.46e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G429169 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.495413 x 10-1 | 87 | 69 | 110 | 74 | 55.77% | 40.22% | 156 | 184 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1495413' χ2 p-value for Mo17 x B73: '.0079554' Biased in favor of strain: '' |
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| GRMZM2G429169 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.57341 x 10-2 | 157 | 60 | 73 | 84 | 72.35% | 53.50% | 217 | 157 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0757341' χ2 p-value for Mo17 x B73: '.0004672' Biased in favor of strain: '' |
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| GRMZM2G429128 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 499 | 18 | 483 | 7 | 96.52% | 1.43% | 517 | 490 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G429128 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 6 | 13 | 100.00% | 68.42% | 8 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.8711317' Biased in favor of strain: '' |
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| GRMZM2G429118 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.270892 x 10-1 | 6 | 4 | 5 | 9 | 60.00% | 64.29% | 10 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.2850494' Biased in favor of strain: '' |
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| GRMZM2G429118 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.24 x 10-10 | 78 | 0 | 101 | 12 | 100.00% | 10.62% | 78 | 113 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.24e-10' χ2 p-value for Mo17 x B73: '1.29e-36' Biased in favor of strain: 'B73' |
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| GRMZM2G429113 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.66049 x 10-2 | 113 | 85 | 127 | 85 | 57.07% | 40.09% | 198 | 212 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0466049' χ2 p-value for Mo17 x B73: '.0039195' Biased in favor of strain: 'B73' |
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| GRMZM2G429113 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.34072 x 10-1 | 25 | 14 | 38 | 5 | 64.10% | 11.63% | 39 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.734072' χ2 p-value for Mo17 x B73: '1.92e-14' Biased in favor of strain: '' |
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| GRMZM2G429057 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 509 | 3 | 347 | 2 | 99.41% | 0.57% | 512 | 349 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G429057 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.93 x 10-23 | 193 | 0 | 141 | 2 | 100.00% | 1.40% | 193 | 143 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.93e-23' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G429000 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.92 x 10-13 | 75 | 8 | 97 | 8 | 90.36% | 7.62% | 83 | 105 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.92e-13' χ2 p-value for Mo17 x B73: '3.77e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G429000 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G428964 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.657123 x 10-1 | 11 | 3 | 7 | 4 | 78.57% | 36.36% | 14 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0325094' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: '' |
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| GRMZM2G428964 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.649876 x 10-1 | 15 | 9 | 8 | 50 | 62.50% | 86.21% | 24 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6649876' χ2 p-value for Mo17 x B73: '.001595' Biased in favor of strain: '' |
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| GRMZM2G428933 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.161533 x 10-1 | 38 | 36 | 26 | 33 | 51.35% | 55.93% | 74 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8161533' χ2 p-value for Mo17 x B73: '.3621255' Biased in favor of strain: '' |
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| GRMZM2G428933 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.27165 x 10-1 | 46 | 29 | 36 | 42 | 61.33% | 53.85% | 75 | 78 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.327165' χ2 p-value for Mo17 x B73: '.0163091' Biased in favor of strain: '' |
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| GRMZM2G428835 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 2 | 100.00% | 100.00% | 4 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G428835 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 0 | 1 | 100.00% | 100.00% | 10 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |