Displaying data sets 48201 - 48300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G26740 ATS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.80129 x 10-1 10 5 3 5 66.67% 62.50% 15 8 TAIR8 Avg. embryo expression (dissected): '1693.72'
Avg. embryo expression (LCM): '21.3873'
AT4G26740 ATS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.1128 x 10-2 11 11 50.00% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26740 ATS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.29933 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26740 ATS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6883 x 10-2 0 3 0.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.637186'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '2.35167'
Tissue used: 'pure endosperm, no chalazal'
AT4G26730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.37186 x 10-1 2 4 1 2 33.33% 66.67% 6 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.637186'
Avg. expression score for this sample: '2.51705'
Avg. expression score in LCM sample: '2.35167'
Tissue used: 'full endosperm'
AT4G26730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '.929028'
Avg. embryo expression (LCM): '0'
AT4G26730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.20779 x 10-1 0 5 0.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.90909 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26720 PPX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 20 6 8 7 76.92% 46.67% 26 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.832948'
Avg. expression score for this sample: '102.49'
Avg. expression score in LCM sample: '100.46'
Tissue used: 'pure endosperm, no chalazal'
AT4G26720 PPX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.39194 x 10-1 58 15 36 55 79.45% 60.44% 73 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.832948'
Avg. expression score for this sample: '143.029'
Avg. expression score in LCM sample: '100.46'
Tissue used: 'full endosperm'
AT4G26720 PPX1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.03634 x 10-1 29 10 8 0 74.36% 0.00% 39 8 TAIR8 Avg. embryo expression (dissected): '133.833'
Avg. embryo expression (LCM): '205.157'
AT4G26720 PPX1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.4881 x 10-2 4 7 36.36% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26720 PPX1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.92448 x 10-1 59 21 73.75% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26720 PPX1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.2 x 10-4 102 18 85.00% 120 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.47527 x 10-1 9 4 5 2 69.23% 28.57% 13 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '198.174'
Avg. expression score in LCM sample: '93.6992'
Tissue used: 'pure endosperm, no chalazal'
AT4G26710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.41132 x 10-1 32 3 14 9 91.43% 39.13% 35 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '420.755'
Avg. expression score in LCM sample: '93.6992'
Tissue used: 'full endosperm'
AT4G26710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.03567 x 10-1 9 4 1 0 69.23% 0.00% 13 1 TAIR8 Avg. embryo expression (dissected): '170.676'
Avg. embryo expression (LCM): '141.824'
AT4G26710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.02923 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.24332 x 10-1 23 22 51.11% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.968 x 10-3 34 3 91.89% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26701 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '15.9829'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G26701 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.876'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G26701 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.2901'
Avg. embryo expression (LCM): '0'
AT4G26701 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26701 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26701 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26700 FIM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 12 3 10 17 80.00% 62.96% 15 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.392902'
Avg. expression score for this sample: '313.188'
Avg. expression score in LCM sample: '43.3882'
Tissue used: 'pure endosperm, no chalazal'
AT4G26700 FIM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.00569 x 10-1 51 25 21 66 67.11% 75.86% 76 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.392902'
Avg. expression score for this sample: '419.59'
Avg. expression score in LCM sample: '43.3882'
Tissue used: 'full endosperm'
AT4G26700 FIM1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28308 x 10-1 7 2 2 2 77.78% 50.00% 9 4 TAIR8 Avg. embryo expression (dissected): '189.693'
Avg. embryo expression (LCM): '36.558'
AT4G26700 FIM1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.65383 x 10-1 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26700 FIM1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8631 x 10-2 25 2 92.59% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26700 FIM1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.38 x 10-4 53 3 94.64% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26690 SHV3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 32 25 15 45 56.14% 75.00% 57 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.114756'
Avg. expression score for this sample: '86.2073'
Avg. expression score in LCM sample: '18.3724'
Tissue used: 'pure endosperm, no chalazal'
AT4G26690 SHV3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.7795 x 10-2 95 64 38 184 59.75% 82.88% 159 222 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.114756'
Avg. expression score for this sample: '160.276'
Avg. expression score in LCM sample: '18.3724'
Tissue used: 'full endosperm'
AT4G26690 SHV3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.42879 x 10-1 74 78 41 19 48.68% 31.67% 152 60 TAIR8 Avg. embryo expression (dissected): '174.692'
Avg. embryo expression (LCM): '70.8429'
AT4G26690 SHV3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.7867 x 10-2 30 23 56.60% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26690 SHV3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7 x 10-12 90 0 100.00% 90 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26690 SHV3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-10 104 3 97.20% 107 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.4592'
Avg. expression score in LCM sample: '14.889'
Tissue used: 'pure endosperm, no chalazal'
AT4G26680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 2 1 2 71.43% 66.67% 7 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '25.1642'
Avg. expression score in LCM sample: '14.889'
Tissue used: 'full endosperm'
AT4G26680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '14.0129'
Avg. embryo expression (LCM): '19.0765'
AT4G26680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26675 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G26675 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G26675 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G26675 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26675 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26675 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.480115'
Avg. expression score for this sample: '46.4448'
Avg. expression score in LCM sample: '33.8346'
Tissue used: 'pure endosperm, no chalazal'
AT4G26670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.38433 x 10-1 8 2 1 6 80.00% 85.71% 10 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.480115'
Avg. expression score for this sample: '43.251'
Avg. expression score in LCM sample: '33.8346'
Tissue used: 'full endosperm'
AT4G26670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 3 1 0 50.00% 0.00% 6 1 TAIR8 Avg. embryo expression (dissected): '124.75'
Avg. embryo expression (LCM): '115.627'
AT4G26670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.39243 x 10-1 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '101.946'
Avg. expression score in LCM sample: '109.397'
Tissue used: 'pure endosperm, no chalazal'
AT4G26660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '69.4557'
Avg. expression score in LCM sample: '109.397'
Tissue used: 'full endosperm'
AT4G26660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '202.587'
Avg. embryo expression (LCM): '164.517'
AT4G26660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '76.0229'
Avg. expression score in LCM sample: '59.2914'
Tissue used: 'pure endosperm, no chalazal'
AT4G26650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '69.2466'
Avg. expression score in LCM sample: '59.2914'
Tissue used: 'full endosperm'
AT4G26650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '84.2027'
Avg. embryo expression (LCM): '41.1293'
AT4G26650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26640 WRKY20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 1 0.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '129.922'
Avg. expression score in LCM sample: '40.3458'
Tissue used: 'pure endosperm, no chalazal'
AT4G26640 WRKY20 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '168.602'
Avg. expression score in LCM sample: '40.3458'
Tissue used: 'full endosperm'
AT4G26640 WRKY20 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '161.604'
Avg. embryo expression (LCM): '92.4311'
AT4G26640 WRKY20 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26640 WRKY20 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26640 WRKY20 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.44444 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.75 x 10-4 10599 5071 4898 10620 67.64% 68.44% 15670 15518 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '11932.1'
Avg. expression score in LCM sample: '413.629'
Tissue used: 'pure endosperm, no chalazal'
AT4G26630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 11999 4347 5730 19031 73.41% 76.86% 16346 24761 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '12087.7'
Avg. expression score in LCM sample: '413.629'
Tissue used: 'full endosperm'
AT4G26630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.3 x 10-9 6628 5319 2268 2026 55.48% 47.18% 11947 4294 TAIR8 Avg. embryo expression (dissected): '10235.1'
Avg. embryo expression (LCM): '2464.95'
AT4G26630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.57915 x 10-1 664 263 71.63% 927 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 12119 2983 80.25% 15102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 18059 2363 88.43% 20422 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.85173 x 10-1 268 120 137 227 69.07% 62.36% 388 364 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000783'
Avg. expression score for this sample: '782.305'
Avg. expression score in LCM sample: '456.899'
Tissue used: 'pure endosperm, no chalazal'
AT4G26620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 x 10-6 366 125 102 382 74.54% 78.93% 491 484 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000783'
Avg. expression score for this sample: '584.086'
Avg. expression score in LCM sample: '456.899'
Tissue used: 'full endosperm'
AT4G26620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.49523 x 10-1 193 162 84 61 54.37% 42.07% 355 145 TAIR8 Avg. embryo expression (dissected): '779.926'
Avg. embryo expression (LCM): '644.393'
AT4G26620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.58279 x 10-1 117 36 76.47% 153 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0 x 10-20 168 2 98.82% 170 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 318 8 97.55% 326 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26610 D6PKL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '104.747'
Avg. expression score in LCM sample: '59.5266'
Tissue used: 'pure endosperm, no chalazal'
AT4G26610 D6PKL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '113.693'
Avg. expression score in LCM sample: '59.5266'
Tissue used: 'full endosperm'
AT4G26610 D6PKL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '204.869'
Avg. embryo expression (LCM): '142.54'
AT4G26610 D6PKL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26610 D6PKL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26610 D6PKL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '134.398'
Avg. expression score in LCM sample: '56.1607'
Tissue used: 'pure endosperm, no chalazal'
AT4G26600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '115.69'
Avg. expression score in LCM sample: '56.1607'
Tissue used: 'full endosperm'
AT4G26600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '296.225'
Avg. embryo expression (LCM): '320.42'
AT4G26600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G26600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'