| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G434445 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 2 | 4 | 0 | 66.67% | 0.00% | 6 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G434445 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G434380 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630246 x 10-1 | 5 | 6 | 4 | 7 | 45.45% | 63.64% | 11 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7630246' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: '' |
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| GRMZM2G434380 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 4 | 3 | 100.00% | 42.86% | 3 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.1814491' Biased in favor of strain: '' |
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| GRMZM2G434317 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.568392 x 10-1 | 17 | 11 | 9 | 18 | 60.71% | 66.67% | 28 | 27 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2568392' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G434317 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 4 | 9 | 13 | 33.33% | 59.09% | 6 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832614' χ2 p-value for Mo17 x B73: '.4509822' Biased in favor of strain: '' |
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| GRMZM2G434252 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.76 x 10-28 | 124 | 1 | 162 | 0 | 99.20% | 0.00% | 125 | 162 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.76e-28' χ2 p-value for Mo17 x B73: '4.14e-37' Biased in favor of strain: 'B73' |
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| GRMZM2G434252 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.73 x 10-6 | 44 | 0 | 44 | 0 | 100.00% | 0.00% | 44 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.73e-06' χ2 p-value for Mo17 x B73: '6.55e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G434170 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 3 | 0 | 100.00% | 0.00% | 6 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G434170 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.18 x 10-11 | 92 | 0 | 35 | 0 | 100.00% | 0.00% | 92 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.18e-11' χ2 p-value for Mo17 x B73: '5.93e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G434155 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 9 | 9 | 8 | 12 | 50.00% | 60.00% | 18 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3710934' Biased in favor of strain: '' |
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| GRMZM2G434155 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G434098 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.55 x 10-10 | 59 | 7 | 48 | 1 | 89.39% | 2.04% | 66 | 49 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.55e-10' χ2 p-value for Mo17 x B73: '1.89e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G434098 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G433942 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 483 | 174 | 508 | 186 | 73.52% | 26.80% | 657 | 694 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.82e-33' χ2 p-value for Mo17 x B73: '2.34e-34' Biased in favor of strain: 'B73' |
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| GRMZM2G433942 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.85 x 10-22 | 451 | 69 | 267 | 142 | 86.73% | 34.72% | 520 | 409 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.85e-22' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G433801 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.47 x 10-3 | 332 | 232 | 256 | 194 | 58.87% | 43.11% | 564 | 450 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000255' χ2 p-value for Mo17 x B73: '.00347' Biased in favor of strain: 'B73' |
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| GRMZM2G433801 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.60195 x 10-2 | 135 | 49 | 101 | 160 | 73.37% | 61.30% | 184 | 261 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0537681' χ2 p-value for Mo17 x B73: '.0660195' Biased in favor of strain: '' |
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| GRMZM2G433800 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 6 | 1 | 1 | 25.00% | 50.00% | 8 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G433800 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G433727 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 5 | 0 | 10 | 16.67% | 100.00% | 6 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1024704' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G433727 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 7 | 0 | 14 | 0.00% | 100.00% | 7 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.008151' Biased in favor of strain: '' |
|||||
| GRMZM2G433624 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 4 | 3 | 1 | 60.00% | 25.00% | 10 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G433624 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G433598 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 3 | 5 | 33.33% | 62.50% | 3 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
|||||
| GRMZM2G433598 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 7 | 5 | 50.00% | 41.67% | 2 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.0661925' Biased in favor of strain: '' |
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| GRMZM2G433591 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.0 x 10-30 | 1007 | 439 | 1032 | 573 | 69.64% | 35.70% | 1446 | 1605 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.17e-30' Biased in favor of strain: 'B73' |
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| GRMZM2G433591 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2136 | 323 | 1111 | 676 | 86.86% | 37.83% | 2459 | 1787 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G433446 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 1 | 1 | 0.00% | 50.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G433446 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 1 | 0.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G433433 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.587153 x 10-1 | 151 | 132 | 166 | 102 | 53.36% | 38.06% | 283 | 268 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2587153' χ2 p-value for Mo17 x B73: '.0000925' Biased in favor of strain: '' |
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| GRMZM2G433433 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.4628 x 10-3 | 33 | 3 | 16 | 3 | 91.67% | 15.79% | 36 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0014628' χ2 p-value for Mo17 x B73: '2.55e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G433385 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 7 | 1 | 5 | 12.50% | 83.33% | 8 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338949' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: '' |
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| GRMZM2G433385 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.172907 x 10-1 | 11 | 8 | 7 | 26 | 57.89% | 78.79% | 19 | 33 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4172907' χ2 p-value for Mo17 x B73: '.1396495' Biased in favor of strain: '' |
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| GRMZM2G433162 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.882154 x 10-1 | 293 | 262 | 544 | 785 | 52.79% | 59.07% | 555 | 1329 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1882154' χ2 p-value for Mo17 x B73: '3.82e-11' Biased in favor of strain: '' |
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| GRMZM2G433162 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.254419 x 10-1 | 72 | 26 | 159 | 282 | 73.47% | 63.95% | 98 | 441 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1531396' χ2 p-value for Mo17 x B73: '.2254419' Biased in favor of strain: '' |
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| GRMZM2G433137 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.655179 x 10-1 | 9 | 4 | 2 | 14 | 69.23% | 87.50% | 13 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1655179' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: '' |
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| GRMZM2G433137 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 4 | 0 | 9 | 42.86% | 100.00% | 7 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1814437' χ2 p-value for Mo17 x B73: '.0338949' Biased in favor of strain: '' |
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| GRMZM2G433117 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.8 x 10-8 | 582 | 289 | 451 | 304 | 66.82% | 40.26% | 871 | 755 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.15e-23' χ2 p-value for Mo17 x B73: '8.80e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G433117 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.62 x 10-20 | 1140 | 322 | 661 | 767 | 77.98% | 53.71% | 1462 | 1428 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.62e-20' χ2 p-value for Mo17 x B73: '2.90e-25' Biased in favor of strain: 'B73' |
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| GRMZM2G433002 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.0 x 10-30 | 336 | 99 | 305 | 51 | 77.24% | 14.33% | 435 | 356 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.37e-30' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G433002 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 2.9 x 10-26 | 102 | 176 | 186 | 15 | 36.69% | 7.46% | 278 | 201 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.90e-26' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G432926 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.3457 x 10-3 | 22 | 7 | 34 | 14 | 75.86% | 29.17% | 29 | 48 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0053457' χ2 p-value for Mo17 x B73: '.0038924' Biased in favor of strain: 'B73' |
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| GRMZM2G432926 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G432918 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.789924 x 10-1 | 38 | 24 | 28 | 39 | 61.29% | 58.21% | 62 | 67 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0754036' χ2 p-value for Mo17 x B73: '.1789924' Biased in favor of strain: '' |
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| GRMZM2G432918 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 1 | 3 | 13 | 83.33% | 81.25% | 6 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.215925' Biased in favor of strain: '' |
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| GRMZM2G432850 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.725278 x 10-1 | 156 | 110 | 152 | 162 | 58.65% | 51.59% | 266 | 314 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0047958' χ2 p-value for Mo17 x B73: '.5725278' Biased in favor of strain: '' |
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| GRMZM2G432850 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.686219 x 10-1 | 244 | 126 | 114 | 199 | 65.95% | 63.58% | 370 | 313 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7686219' χ2 p-value for Mo17 x B73: '.246426' Biased in favor of strain: '' |
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| GRMZM2G432801 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.516567 x 10-1 | 341 | 289 | 344 | 320 | 54.13% | 48.19% | 630 | 664 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0382907' χ2 p-value for Mo17 x B73: '.3516567' Biased in favor of strain: '' |
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| GRMZM2G432801 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.567179 x 10-1 | 85 | 39 | 32 | 107 | 68.55% | 76.98% | 124 | 139 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6567179' χ2 p-value for Mo17 x B73: '.0099096' Biased in favor of strain: '' |
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| GRMZM2G432796 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 762 | 281 | 745 | 278 | 73.06% | 27.17% | 1043 | 1023 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G432796 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.0 x 10-30 | 737 | 131 | 403 | 166 | 84.91% | 29.17% | 868 | 569 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.17e-30' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G432774 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.166558 x 10-1 | 617 | 509 | 566 | 539 | 54.80% | 48.78% | 1126 | 1105 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0012886' χ2 p-value for Mo17 x B73: '.4166558' Biased in favor of strain: '' |
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| GRMZM2G432774 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.35 x 10-5 | 695 | 257 | 524 | 778 | 73.00% | 59.75% | 952 | 1302 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000335' χ2 p-value for Mo17 x B73: '1.22e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G432722 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.984039 x 10-1 | 539 | 517 | 435 | 457 | 51.04% | 51.23% | 1056 | 892 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4984039' χ2 p-value for Mo17 x B73: '.4613568' Biased in favor of strain: '' |
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| GRMZM2G432722 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.688826 x 10-1 | 114 | 61 | 113 | 178 | 65.14% | 61.17% | 175 | 291 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6688826' χ2 p-value for Mo17 x B73: '.0466279' Biased in favor of strain: '' |
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| GRMZM2G432662 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.898612 x 10-1 | 81 | 76 | 63 | 88 | 51.59% | 58.28% | 157 | 151 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6898612' χ2 p-value for Mo17 x B73: '.0419041' Biased in favor of strain: '' |
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| GRMZM2G432662 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.198979 x 10-1 | 148 | 91 | 119 | 310 | 61.92% | 72.26% | 239 | 429 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1198979' χ2 p-value for Mo17 x B73: '.0139698' Biased in favor of strain: '' |
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| GRMZM2G432642 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.2939 x 10-3 | 317 | 241 | 418 | 277 | 56.81% | 39.86% | 558 | 695 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0012939' χ2 p-value for Mo17 x B73: '8.87e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G432642 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 7.484 x 10-4 | 15 | 22 | 16 | 8 | 40.54% | 33.33% | 37 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0007484' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
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| GRMZM2G432583 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 0 | 0 | 100.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G432583 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.1512 x 10-3 | 14 | 0 | 13 | 0 | 100.00% | 0.00% | 14 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0081512' χ2 p-value for Mo17 x B73: '3.41e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G432566 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.700111 x 10-1 | 349 | 224 | 254 | 224 | 60.91% | 46.86% | 573 | 478 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.77e-07' χ2 p-value for Mo17 x B73: '.1700111' Biased in favor of strain: '' |
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| GRMZM2G432566 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.702954 x 10-1 | 475 | 224 | 274 | 503 | 67.95% | 64.74% | 699 | 777 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4702954' χ2 p-value for Mo17 x B73: '.2536492' Biased in favor of strain: '' |
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| GRMZM2G432480 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 5 | 1 | 100.00% | 16.67% | 5 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.1024704' Biased in favor of strain: '' |
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| GRMZM2G432480 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.28 x 10-7 | 63 | 2 | 18 | 1 | 96.92% | 5.26% | 65 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.28e-07' χ2 p-value for Mo17 x B73: '1.36e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G432335 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.66 x 10-21 | 182 | 41 | 185 | 24 | 81.61% | 11.48% | 223 | 209 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.66e-21' χ2 p-value for Mo17 x B73: '8.32e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G432335 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.26 x 10-20 | 188 | 3 | 115 | 22 | 98.43% | 16.06% | 191 | 137 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.26e-20' χ2 p-value for Mo17 x B73: '3.26e-36' Biased in favor of strain: 'B73' |
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| GRMZM2G432266 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 954 | 3 | 1039 | 6 | 99.69% | 0.57% | 957 | 1045 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G432266 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1167 | 7 | 649 | 6 | 99.40% | 0.92% | 1174 | 655 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G432176 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 2 | 0.00% | 66.67% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G432176 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 1 | 0 | 100.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G432167 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 8 | 0 | 100.00% | 0.00% | 2 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G432167 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G432083 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 0 | 3 | 0 | 100.00% | 0.00% | 4 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G432083 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 3 | 2 | 100.00% | 40.00% | 1 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.2059032' Biased in favor of strain: '' |
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| GRMZM2G432075 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 1 | 0 | 0 | 80.00% | 5 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G432075 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 5 | 100.00% | 0 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G432060 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.38474 x 10-2 | 100 | 77 | 83 | 58 | 56.50% | 41.13% | 177 | 141 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0838474' χ2 p-value for Mo17 x B73: '.0352583' Biased in favor of strain: '' |
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| GRMZM2G432060 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.61 x 10-5 | 42 | 1 | 35 | 0 | 97.67% | 0.00% | 43 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000161' χ2 p-value for Mo17 x B73: '5.93e-17' Biased in favor of strain: 'B73' |
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| GRMZM2G432050 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.495413 x 10-1 | 24 | 15 | 29 | 16 | 61.54% | 35.56% | 39 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1495413' χ2 p-value for Mo17 x B73: '.0526323' Biased in favor of strain: '' |
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| GRMZM2G432050 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 3 | 6 | 9 | 66.67% | 60.00% | 9 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999862' χ2 p-value for Mo17 x B73: '.5838823' Biased in favor of strain: '' |
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| GRMZM2G431989 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 6 | 0 | 100.00% | 0.00% | 3 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G431989 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G431900 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.272 x 10-3 | 105 | 6 | 55 | 26 | 94.59% | 32.10% | 111 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.63e-21' χ2 p-value for Mo17 x B73: '.001272' Biased in favor of strain: 'B73' |
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| GRMZM2G431900 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 770 | 88 | 453 | 136 | 89.74% | 23.09% | 858 | 589 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G431856 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.053805 x 10-1 | 8 | 5 | 11 | 5 | 61.54% | 31.25% | 13 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4053805' χ2 p-value for Mo17 x B73: '.1336144' Biased in favor of strain: '' |
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| GRMZM2G431856 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G431850 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.54 x 10-5 | 37 | 4 | 33 | 6 | 90.24% | 15.38% | 41 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.55e-07' χ2 p-value for Mo17 x B73: '.0000154' Biased in favor of strain: 'B73' |
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| GRMZM2G431850 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.31409 x 10-2 | 39 | 5 | 11 | 8 | 88.64% | 42.11% | 44 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0019922' χ2 p-value for Mo17 x B73: '.0231409' Biased in favor of strain: '' |
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| GRMZM2G431821 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.67 x 10-15 | 1082 | 684 | 984 | 661 | 61.27% | 40.18% | 1766 | 1645 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.78e-21' χ2 p-value for Mo17 x B73: '1.67e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G431821 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.45 x 10-19 | 736 | 176 | 600 | 567 | 80.70% | 48.59% | 912 | 1167 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.45e-19' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G431708 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.65 x 10-13 | 1592 | 1112 | 1328 | 977 | 58.88% | 42.39% | 2704 | 2305 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.69e-20' χ2 p-value for Mo17 x B73: '2.65e-13' Biased in favor of strain: 'B73' |
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| GRMZM2G431708 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.89 x 10-13 | 1682 | 596 | 930 | 1078 | 73.84% | 53.69% | 2278 | 2008 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.89e-13' χ2 p-value for Mo17 x B73: '5.53e-35' Biased in favor of strain: 'B73' |
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| GRMZM2G431573 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 3 | 1 | 25.00% | 25.00% | 4 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G431573 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 0 | 100.00% | 0.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G431524 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 1 | 1 | 40.00% | 50.00% | 5 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6547208' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G431524 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G431350 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.96 x 10-4 | 69 | 115 | 43 | 93 | 37.50% | 68.38% | 184 | 136 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000696' χ2 p-value for Mo17 x B73: '.0000181' Biased in favor of strain: 'Mo17' |
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| GRMZM2G431350 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.03828 x 10-2 | 31 | 37 | 42 | 54 | 45.59% | 56.25% | 68 | 96 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002267' χ2 p-value for Mo17 x B73: '.0303828' Biased in favor of strain: '' |