Displaying data sets 47401 - 47500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G27960 UBC9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27960 UBC9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '116.428'
Avg. expression score in LCM sample: '89.8043'
Tissue used: 'pure endosperm, no chalazal'
AT4G27960 UBC9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '138.736'
Avg. expression score in LCM sample: '89.8043'
Tissue used: 'full endosperm'
AT4G27960 UBC9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '65.114'
Avg. embryo expression (LCM): '48.5389'
AT4G27960 UBC9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27960 UBC9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27950 CRF4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.26316 x 10-1 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27950 CRF4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '2.7828'
Avg. expression score in LCM sample: '1.14644'
Tissue used: 'pure endosperm, no chalazal'
AT4G27950 CRF4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '1.05785'
Avg. expression score in LCM sample: '1.14644'
Tissue used: 'full endosperm'
AT4G27950 CRF4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 2 1 0 2 66.67% 100.00% 3 2 TAIR8 Avg. embryo expression (dissected): '14.9578'
Avg. embryo expression (LCM): '12.659'
AT4G27950 CRF4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27950 CRF4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.24333 x 10-1 10 7 58.82% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27940 MTM1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27940 MTM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '148.173'
Avg. expression score in LCM sample: '42.0654'
Tissue used: 'pure endosperm, no chalazal'
AT4G27940 MTM1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '86.8718'
Avg. expression score in LCM sample: '42.0654'
Tissue used: 'full endosperm'
AT4G27940 MTM1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '163.126'
Avg. embryo expression (LCM): '101.235'
AT4G27940 MTM1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27940 MTM1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G27930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G27930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G27930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27920 PYL10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27920 PYL10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G27920 PYL10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 3 100.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.3766'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G27920 PYL10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.500555'
Avg. embryo expression (LCM): '0'
AT4G27920 PYL10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27920 PYL10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27910 SDG16 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.7658 x 10-1 51 13 79.69% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27910 SDG16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.14384 x 10-1 66 27 25 48 70.97% 65.75% 93 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.1408'
Avg. expression score for this sample: '65.63'
Avg. expression score in LCM sample: '47.0627'
Tissue used: 'pure endosperm, no chalazal'
AT4G27910 SDG16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.3095 x 10-2 53 14 21 60 79.10% 74.07% 67 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.1408'
Avg. expression score for this sample: '68.6136'
Avg. expression score in LCM sample: '47.0627'
Tissue used: 'full endosperm'
AT4G27910 SDG16 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.5003 x 10-1 34 45 5 4 43.04% 44.44% 79 9 TAIR8 Avg. embryo expression (dissected): '46.241'
Avg. embryo expression (LCM): '25.6572'
AT4G27910 SDG16 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 14 5 73.68% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27910 SDG16 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 83 31 72.81% 114 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2274.33'
Avg. expression score in LCM sample: '934.67'
Tissue used: 'pure endosperm, no chalazal'
AT4G27900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1588.67'
Avg. expression score in LCM sample: '934.67'
Tissue used: 'full endosperm'
AT4G27900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '242.612'
Avg. embryo expression (LCM): '132.418'
AT4G27900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.7903 x 10-1 12 31 3 28 27.91% 90.32% 43 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '37.8156'
Avg. expression score in LCM sample: '138.351'
Tissue used: 'pure endosperm, no chalazal'
AT4G27890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.3875 x 10-2 1 2 4 37 33.33% 90.24% 3 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.2014'
Avg. expression score in LCM sample: '138.351'
Tissue used: 'full endosperm'
AT4G27890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 2 0.00% 100.00% 2 2 TAIR8 Avg. embryo expression (dissected): '5.75142'
Avg. embryo expression (LCM): '0'
AT4G27890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.49969 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.45896 x 10-1 4115 2223 64.93% 6338 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 919 477 65.83% 1396 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27885 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G27885 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G27885 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G27885 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27885 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27885 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 36 9 73 30.77% 89.02% 52 82 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.786313'
Avg. expression score for this sample: '175.496'
Avg. expression score in LCM sample: '94.6693'
Tissue used: 'pure endosperm, no chalazal'
AT4G27880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.04687 x 10-1 30 35 15 58 46.15% 79.45% 65 73 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.786313'
Avg. expression score for this sample: '81.9628'
Avg. expression score in LCM sample: '94.6693'
Tissue used: 'full endosperm'
AT4G27880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.52888 x 10-1 8 38 2 15 17.39% 88.24% 46 17 TAIR8 Avg. embryo expression (dissected): '101.941'
Avg. embryo expression (LCM): '73.3798'
AT4G27880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.4466 x 10-2 21 3 87.50% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-13 126 5 96.18% 131 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.92707 x 10-1 52 26 66.67% 78 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27875 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G27875 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G27875 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G27875 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27875 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27875 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.68203 x 10-1 61 15 18 21 80.26% 53.85% 76 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.0e-06'
Avg. expression score for this sample: '16.7388'
Avg. expression score in LCM sample: '4.62984'
Tissue used: 'pure endosperm, no chalazal'
AT4G27870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.2 x 10-6 133 15 71 230 89.86% 76.41% 148 301 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.0e-06'
Avg. expression score for this sample: '37.5677'
Avg. expression score in LCM sample: '4.62984'
Tissue used: 'full endosperm'
AT4G27870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.4127 x 10-2 314 214 77 41 59.47% 34.75% 528 118 TAIR8 Avg. embryo expression (dissected): '150.516'
Avg. embryo expression (LCM): '112.688'
AT4G27870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.624 x 10-2 74 10 88.10% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.3 x 10-9 262 17 93.91% 279 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.9 x 10-4 419 61 87.29% 480 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27860 MEB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.6749 x 10-1 20 0 7 3 100.00% 30.00% 20 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.20103'
Avg. expression score for this sample: '7.88369'
Avg. expression score in LCM sample: '4.14481'
Tissue used: 'pure endosperm, no chalazal'
AT4G27860 MEB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.26538 x 10-1 37 1 22 30 97.37% 57.69% 38 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.20103'
Avg. expression score for this sample: '12.8486'
Avg. expression score in LCM sample: '4.14481'
Tissue used: 'full endosperm'
AT4G27860 MEB1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.05249 x 10-1 30 12 13 0 71.43% 0.00% 42 13 TAIR8 Avg. embryo expression (dissected): '21.8493'
Avg. embryo expression (LCM): '8.86635'
AT4G27860 MEB1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.01624 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27860 MEB1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.699 x 10-3 15 16 48.39% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27860 MEB1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-12 204 2 99.03% 206 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.61691'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G27850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 2 1 100.00% 33.33% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.54571'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G27850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 5.45455 x 10-1 5 1 0 0 83.33% 6 0 TAIR8 Avg. embryo expression (dissected): '3.55183'
Avg. embryo expression (LCM): '2.18519'
AT4G27850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.28571 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.66667 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '84.6422'
Avg. expression score in LCM sample: '54.4411'
Tissue used: 'pure endosperm, no chalazal'
AT4G27840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '93.4232'
Avg. expression score in LCM sample: '54.4411'
Tissue used: 'full endosperm'
AT4G27840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '116.339'
Avg. embryo expression (LCM): '66.7363'
AT4G27840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27830 BGLU10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043382'
Avg. expression score for this sample: '16.6854'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G27830 BGLU10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.3382 x 10-2 3 0 0 13 100.00% 100.00% 3 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043382'
Avg. expression score for this sample: '43.5747'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G27830 BGLU10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.85464'
Avg. embryo expression (LCM): '0'
AT4G27830 BGLU10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27830 BGLU10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 69 1 98.57% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27830 BGLU10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 48 0 100.00% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27820 BGLU9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.31674'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G27820 BGLU9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 0 1 66.67% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.36288'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G27820 BGLU9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.45615'
Avg. embryo expression (LCM): '0'
AT4G27820 BGLU9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'