Displaying data sets 47301 - 47400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G28088 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G28088 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G28088 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28088 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28085 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28085 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.577614'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G28085 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.62461'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G28085 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G28085 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28085 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.81457 x 10-1 69 46 60.00% 115 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 203 122 74 186 62.46% 71.54% 325 260 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087712'
Avg. expression score for this sample: '481.339'
Avg. expression score in LCM sample: '149.933'
Tissue used: 'pure endosperm, no chalazal'
AT4G28080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.9711 x 10-2 203 136 177 295 59.88% 62.50% 339 472 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.087712'
Avg. expression score for this sample: '459.686'
Avg. expression score in LCM sample: '149.933'
Tissue used: 'full endosperm'
AT4G28080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.53417 x 10-1 212 219 72 83 49.19% 53.55% 431 155 TAIR8 Avg. embryo expression (dissected): '741.665'
Avg. embryo expression (LCM): '271.102'
AT4G28080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.53604 x 10-1 35 16 68.63% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.04961 x 10-1 52 28 65.00% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28070 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.025 x 10-3 21 1 95.45% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.63967 x 10-1 7 4 10 5 63.64% 33.33% 11 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.861165'
Avg. expression score for this sample: '39.6851'
Avg. expression score in LCM sample: '31.7769'
Tissue used: 'pure endosperm, no chalazal'
AT4G28070 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4749 x 10-1 15 5 7 19 75.00% 73.08% 20 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.861165'
Avg. expression score for this sample: '40.93'
Avg. expression score in LCM sample: '31.7769'
Tissue used: 'full endosperm'
AT4G28070 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 8 2 5 46.67% 71.43% 15 7 TAIR8 Avg. embryo expression (dissected): '57.5823'
Avg. embryo expression (LCM): '36.9599'
AT4G28070 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28070 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.5167 x 10-2 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28068 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28068 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G28068 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.73969'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G28068 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G28068 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28068 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28060 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '13.1474'
Avg. expression score in LCM sample: '8.98043'
Tissue used: 'pure endosperm, no chalazal'
AT4G28060 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.64288'
Avg. expression score in LCM sample: '8.98043'
Tissue used: 'full endosperm'
AT4G28060 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '22.363'
Avg. embryo expression (LCM): '20.4579'
AT4G28060 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28060 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28050 TET7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.8078 x 10-2 16 1 94.12% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28050 TET7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 49 19 16 24 72.06% 60.00% 68 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.320509'
Avg. expression score for this sample: '78.226'
Avg. expression score in LCM sample: '36.4361'
Tissue used: 'pure endosperm, no chalazal'
AT4G28050 TET7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.47646 x 10-1 43 15 33 87 74.14% 72.50% 58 120 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.320509'
Avg. expression score for this sample: '66.8451'
Avg. expression score in LCM sample: '36.4361'
Tissue used: 'full endosperm'
AT4G28050 TET7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 28 31 8 10 47.46% 55.56% 59 18 TAIR8 Avg. embryo expression (dissected): '77.1001'
Avg. embryo expression (LCM): '49.8199'
AT4G28050 TET7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.46595 x 10-1 7 5 58.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28050 TET7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.0816 x 10-2 33 26 55.93% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28040 UMAMIT33 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.548 x 10-3 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28040 UMAMIT33 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.060606'
Avg. expression score for this sample: '15.4887'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G28040 UMAMIT33 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.0606 x 10-2 0 5 1 0 0.00% 0.00% 5 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.060606'
Avg. expression score for this sample: '27.6013'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G28040 UMAMIT33 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 3 1 0 40.00% 0.00% 5 1 TAIR8 Avg. embryo expression (dissected): '81.0692'
Avg. embryo expression (LCM): '14.7312'
AT4G28040 UMAMIT33 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28040 UMAMIT33 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.5714 x 10-2 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '367.213'
Avg. expression score in LCM sample: '47.0921'
Tissue used: 'pure endosperm, no chalazal'
AT4G28030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '182.673'
Avg. expression score in LCM sample: '47.0921'
Tissue used: 'full endosperm'
AT4G28030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '512.564'
Avg. embryo expression (LCM): '134.603'
AT4G28030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28025 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28025 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '155.108'
Avg. expression score in LCM sample: '15.7121'
Tissue used: 'pure endosperm, no chalazal'
AT4G28025 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '237.05'
Avg. expression score in LCM sample: '15.7121'
Tissue used: 'full endosperm'
AT4G28025 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '201.975'
Avg. embryo expression (LCM): '98.4341'
AT4G28025 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28025 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.3614'
Avg. expression score in LCM sample: '1.16114'
Tissue used: 'pure endosperm, no chalazal'
AT4G28020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.75802'
Avg. expression score in LCM sample: '1.16114'
Tissue used: 'full endosperm'
AT4G28020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '19.9939'
Avg. embryo expression (LCM): '24.7278'
AT4G28020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.42415 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '25.6377'
Avg. expression score in LCM sample: '25.251'
Tissue used: 'pure endosperm, no chalazal'
AT4G28010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 1 6 50.00% 85.71% 2 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '53.4887'
Avg. expression score in LCM sample: '25.251'
Tissue used: 'full endosperm'
AT4G28010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.00105 x 10-1 17 6 3 0 73.91% 0.00% 23 3 TAIR8 Avg. embryo expression (dissected): '73.0998'
Avg. embryo expression (LCM): '64.7143'
AT4G28010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.07692 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28005 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28005 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.755086'
Avg. expression score in LCM sample: '4.2624'
Tissue used: 'pure endosperm, no chalazal'
AT4G28005 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.04886'
Avg. expression score in LCM sample: '4.2624'
Tissue used: 'full endosperm'
AT4G28005 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.04908'
Avg. embryo expression (LCM): '0'
AT4G28005 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28005 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.68222'
Avg. expression score in LCM sample: '2.02831'
Tissue used: 'pure endosperm, no chalazal'
AT4G28000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.917993'
Avg. expression score in LCM sample: '2.02831'
Tissue used: 'full endosperm'
AT4G28000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.745111'
Avg. embryo expression (LCM): '0'
AT4G28000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G28000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27990 YLMG1-2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 745 14 98.16% 759 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27990 YLMG1-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.629 x 10-3 927 275 539 973 77.12% 64.35% 1202 1512 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.8e-09'
Avg. expression score for this sample: '909.348'
Avg. expression score in LCM sample: '268.693'
Tissue used: 'pure endosperm, no chalazal'
AT4G27990 YLMG1-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.1 x 10-9 1165 305 359 730 79.25% 67.03% 1470 1089 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.8e-09'
Avg. expression score for this sample: '619.564'
Avg. expression score in LCM sample: '268.693'
Tissue used: 'full endosperm'
AT4G27990 YLMG1-2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.47939 x 10-1 319 297 187 201 51.79% 51.80% 616 388 TAIR8 Avg. embryo expression (dissected): '611.831'
Avg. embryo expression (LCM): '124.355'
AT4G27990 YLMG1-2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.1 x 10-7 174 130 57.24% 304 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27990 YLMG1-2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.4 x 10-12 241 27 89.93% 268 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.31 x 10-4 109 1 99.09% 110 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 2 0 4 60.00% 100.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001994'
Avg. expression score for this sample: '38.6209'
Avg. expression score in LCM sample: '2.32227'
Tissue used: 'pure endosperm, no chalazal'
AT4G27980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.995 x 10-3 33 5 6 40 86.84% 86.96% 38 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001994'
Avg. expression score for this sample: '99.2482'
Avg. expression score in LCM sample: '2.32227'
Tissue used: 'full endosperm'
AT4G27980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '4.1134'
Avg. embryo expression (LCM): '1.98426'
AT4G27980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.88 x 10-4 84 0 100.00% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27970 SLAH2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27970 SLAH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.491216'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G27970 SLAH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.53819'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G27970 SLAH2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.9585'
Avg. embryo expression (LCM): '0'
AT4G27970 SLAH2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G27970 SLAH2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'