| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G437675 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.568392 x 10-1 | 13 | 7 | 17 | 11 | 65.00% | 39.29% | 20 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.2568392' Biased in favor of strain: '' |
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| GRMZM2G437675 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G437460 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1089 | 524 | 1472 | 553 | 67.51% | 27.31% | 1613 | 2025 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G437460 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.02 x 10-15 | 205 | 19 | 153 | 50 | 91.52% | 24.63% | 224 | 203 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.02e-15' χ2 p-value for Mo17 x B73: '5.54e-37' Biased in favor of strain: 'B73' |
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| GRMZM2G437445 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170751 x 10-1 | 44 | 24 | 34 | 30 | 64.71% | 46.88% | 68 | 64 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0152934' χ2 p-value for Mo17 x B73: '.6170751' Biased in favor of strain: '' |
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| GRMZM2G437445 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.75139 x 10-2 | 146 | 43 | 93 | 141 | 77.25% | 60.26% | 189 | 234 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0020286' χ2 p-value for Mo17 x B73: '.0375139' Biased in favor of strain: '' |
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| GRMZM2G437435 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 8 | 2 | 14 | 14 | 80.00% | 50.00% | 10 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0577796' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G437435 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.16532 x 10-2 | 207 | 44 | 79 | 113 | 82.47% | 58.85% | 251 | 192 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.09e-07' χ2 p-value for Mo17 x B73: '.0216532' Biased in favor of strain: '' |
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| GRMZM2G437270 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G437270 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G437119 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1681 | 1006 | 1417 | 825 | 62.56% | 36.80% | 2687 | 2242 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.20e-39' χ2 p-value for Mo17 x B73: '7.22e-36' Biased in favor of strain: 'B73' |
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| GRMZM2G437119 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.33 x 10-12 | 1714 | 615 | 968 | 1190 | 73.59% | 55.14% | 2329 | 2158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.33e-12' χ2 p-value for Mo17 x B73: '6.98e-30' Biased in favor of strain: 'B73' |
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| GRMZM2G437100 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.63 x 10-10 | 188 | 7 | 104 | 30 | 96.41% | 22.39% | 195 | 134 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.02e-38' χ2 p-value for Mo17 x B73: '1.63e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G437100 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.15453 x 10-2 | 116 | 40 | 58 | 58 | 74.36% | 50.00% | 156 | 116 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0415453' χ2 p-value for Mo17 x B73: '.0001402' Biased in favor of strain: '' |
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| GRMZM2G437097 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.815113 x 10-1 | 15 | 1 | 7 | 6 | 93.75% | 46.15% | 16 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004653' χ2 p-value for Mo17 x B73: '.7815113' Biased in favor of strain: '' |
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| GRMZM2G437097 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 0 | 3 | 100.00% | 100.00% | 5 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1138475' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G436986 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.962534 x 10-1 | 66 | 69 | 83 | 75 | 48.89% | 47.47% | 135 | 158 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7962534' χ2 p-value for Mo17 x B73: '.5244859' Biased in favor of strain: '' |
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| GRMZM2G436986 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.54709 x 10-1 | 6 | 4 | 15 | 13 | 60.00% | 46.43% | 10 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.654709' χ2 p-value for Mo17 x B73: '.0231034' Biased in favor of strain: '' |
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| GRMZM2G436981 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.35 x 10-12 | 516 | 312 | 471 | 235 | 62.32% | 33.29% | 828 | 706 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.35e-12' χ2 p-value for Mo17 x B73: '6.57e-19' Biased in favor of strain: 'B73' |
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| GRMZM2G436981 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.203447 x 10-1 | 36 | 7 | 29 | 48 | 83.72% | 62.34% | 43 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0176778' χ2 p-value for Mo17 x B73: '.4203447' Biased in favor of strain: '' |
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| GRMZM2G436856 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 7 | 0 | 12 | 22.22% | 100.00% | 9 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0955807' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
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| GRMZM2G436856 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.52 x 10-15 | 13 | 51 | 16 | 191 | 20.31% | 92.27% | 64 | 207 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.64e-15' χ2 p-value for Mo17 x B73: '5.52e-15' Biased in favor of strain: 'Mo17' |
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| GRMZM2G436703 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G436703 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 4 | 1 | 7 | 60.00% | 87.50% | 10 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.654709' χ2 p-value for Mo17 x B73: '.2112996' Biased in favor of strain: '' |
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| GRMZM2G436593 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.16 x 10-12 | 225 | 548 | 185 | 347 | 29.11% | 65.23% | 773 | 532 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.36e-31' χ2 p-value for Mo17 x B73: '2.16e-12' Biased in favor of strain: 'Mo17' |
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| GRMZM2G436593 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.038786 x 10-1 | 63 | 28 | 11 | 48 | 69.23% | 81.36% | 91 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6038786' χ2 p-value for Mo17 x B73: '.0166888' Biased in favor of strain: '' |
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| GRMZM2G436583 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.371829 x 10-1 | 81 | 80 | 69 | 50 | 50.31% | 42.02% | 161 | 119 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9371829' χ2 p-value for Mo17 x B73: '.0815562' Biased in favor of strain: '' |
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| GRMZM2G436583 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.159 x 10-3 | 229 | 172 | 92 | 258 | 57.11% | 73.71% | 401 | 350 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000489' χ2 p-value for Mo17 x B73: '.005159' Biased in favor of strain: 'Mo17' |
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| GRMZM2G436511 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.668543 x 10-1 | 26 | 13 | 37 | 31 | 66.67% | 45.59% | 39 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.037373' χ2 p-value for Mo17 x B73: '.4668543' Biased in favor of strain: '' |
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| GRMZM2G436511 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.888442 x 10-1 | 23 | 19 | 15 | 21 | 54.76% | 58.33% | 42 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1016994' χ2 p-value for Mo17 x B73: '.2888442' Biased in favor of strain: '' |
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| GRMZM2G436429 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5931 x 10-3 | 487 | 378 | 414 | 328 | 56.30% | 44.20% | 865 | 742 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002105' χ2 p-value for Mo17 x B73: '.0015931' Biased in favor of strain: 'B73' |
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| GRMZM2G436429 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.416816 x 10-1 | 1229 | 638 | 570 | 985 | 65.83% | 63.34% | 1867 | 1555 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4416816' χ2 p-value for Mo17 x B73: '.0054459' Biased in favor of strain: '' |
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| GRMZM2G436332 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.136637 x 10-1 | 24 | 39 | 35 | 37 | 38.10% | 51.39% | 63 | 72 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.8136637' Biased in favor of strain: '' |
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| GRMZM2G436332 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.015337 x 10-1 | 46 | 20 | 37 | 40 | 69.70% | 51.95% | 66 | 77 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6015337' χ2 p-value for Mo17 x B73: '.0061477' Biased in favor of strain: '' |
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| GRMZM2G436328 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.86 x 10-8 | 135 | 49 | 173 | 83 | 73.37% | 32.42% | 184 | 256 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.30e-10' χ2 p-value for Mo17 x B73: '1.86e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G436328 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.427109 x 10-1 | 63 | 37 | 37 | 79 | 63.00% | 68.10% | 100 | 116 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4366472' χ2 p-value for Mo17 x B73: '.7427109' Biased in favor of strain: '' |
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| GRMZM2G436319 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.48 x 10-8 | 493 | 271 | 376 | 241 | 64.53% | 39.06% | 764 | 617 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.61e-16' χ2 p-value for Mo17 x B73: '5.48e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G436319 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.7902 x 10-3 | 406 | 113 | 172 | 259 | 78.23% | 60.09% | 519 | 431 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.31e-08' χ2 p-value for Mo17 x B73: '.0037902' Biased in favor of strain: 'B73' |
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| GRMZM2G436226 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.13688 x 10-2 | 35 | 21 | 34 | 9 | 62.50% | 20.93% | 56 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0613688' χ2 p-value for Mo17 x B73: '.0001376' Biased in favor of strain: '' |
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| GRMZM2G436226 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 2.31 x 10-6 | 1 | 13 | 29 | 6 | 7.14% | 17.14% | 14 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.31e-06' χ2 p-value for Mo17 x B73: '5.13e-10' Biased in favor of strain: '' |
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| GRMZM2G436199 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.618044 x 10-1 | 17 | 16 | 8 | 7 | 51.52% | 46.67% | 33 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8618044' χ2 p-value for Mo17 x B73: '.7962534' Biased in favor of strain: '' |
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| GRMZM2G436199 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.523643 x 10-1 | 22 | 15 | 22 | 30 | 59.46% | 57.69% | 37 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3523643' χ2 p-value for Mo17 x B73: '.1698104' Biased in favor of strain: '' |
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| GRMZM2G436092 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.456101 x 10-1 | 67 | 41 | 40 | 28 | 62.04% | 41.18% | 108 | 68 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0123546' χ2 p-value for Mo17 x B73: '.1456101' Biased in favor of strain: '' |
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| GRMZM2G436092 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.531812 x 10-1 | 94 | 24 | 33 | 58 | 79.66% | 63.74% | 118 | 91 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0027507' χ2 p-value for Mo17 x B73: '.5531812' Biased in favor of strain: '' |
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| GRMZM2G436082 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.99 x 10-8 | 101 | 22 | 80 | 24 | 82.11% | 23.08% | 123 | 104 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.05e-12' χ2 p-value for Mo17 x B73: '3.99e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G436082 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.30045 x 10-2 | 66 | 17 | 58 | 33 | 79.52% | 36.26% | 83 | 91 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0130045' χ2 p-value for Mo17 x B73: '7.63e-10' Biased in favor of strain: '' |
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| GRMZM2G436001 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.149675 x 10-1 | 294 | 257 | 249 | 299 | 53.36% | 54.56% | 551 | 548 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1149675' χ2 p-value for Mo17 x B73: '.032688' Biased in favor of strain: '' |
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| GRMZM2G436001 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.965136 x 10-1 | 682 | 322 | 331 | 614 | 67.93% | 64.97% | 1004 | 945 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3965136' χ2 p-value for Mo17 x B73: '.269547' Biased in favor of strain: '' |
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| GRMZM2G435993 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G435993 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 0 | 0 | 0 | 100.00% | 10 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G435979 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 3 | 2 | 2 | 70.00% | 50.00% | 10 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G435979 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 3 | 1 | 1 | 50.00% | 50.00% | 6 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3864683' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G435824 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630246 x 10-1 | 5 | 6 | 11 | 6 | 45.45% | 35.29% | 11 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7630246' χ2 p-value for Mo17 x B73: '.2252529' Biased in favor of strain: '' |
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| GRMZM2G435824 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 14 | 10 | 0 | 8 | 58.33% | 100.00% | 24 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3864619' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G435796 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G435796 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 4 | 0 | 0.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G435761 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 0 | 5 | 0 | 100.00% | 0.00% | 11 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0009111' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G435761 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 0 | 6 | 0 | 100.00% | 0.00% | 11 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0190169' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: '' |
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| GRMZM2G435689 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.59 x 10-6 | 0 | 23 | 0 | 21 | 0.00% | 100.00% | 23 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.62e-06' χ2 p-value for Mo17 x B73: '4.59e-06' Biased in favor of strain: 'Mo17' |
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| GRMZM2G435689 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 8 | 0 | 20 | 0.00% | 100.00% | 8 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: '' |
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| GRMZM2G435627 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.73 x 10-6 | 659 | 450 | 670 | 506 | 59.42% | 43.03% | 1109 | 1176 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.47e-10' χ2 p-value for Mo17 x B73: '1.73e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G435627 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.88 x 10-10 | 527 | 150 | 239 | 230 | 77.84% | 49.04% | 677 | 469 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.88e-10' χ2 p-value for Mo17 x B73: '5.61e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G435592 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 8 | 0 | 1 | 27.27% | 100.00% | 11 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.131668' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G435592 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 3 | 6 | 100.00% | 66.67% | 1 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G435589 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.05 x 10-5 | 259 | 363 | 262 | 433 | 41.64% | 62.30% | 622 | 695 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000305' χ2 p-value for Mo17 x B73: '8.79e-11' Biased in favor of strain: 'Mo17' |
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| GRMZM2G435589 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.8164 x 10-3 | 226 | 170 | 120 | 322 | 57.07% | 72.85% | 396 | 442 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000051' χ2 p-value for Mo17 x B73: '.0058164' Biased in favor of strain: 'Mo17' |
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| GRMZM2G435475 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 2 | 2 | 3 | 66.67% | 60.00% | 6 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G435475 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G435445 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.53 x 10-8 | 178 | 62 | 147 | 67 | 74.17% | 31.31% | 240 | 214 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.01e-14' χ2 p-value for Mo17 x B73: '4.53e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G435445 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.74 x 10-7 | 170 | 29 | 98 | 95 | 85.43% | 49.22% | 199 | 193 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.98e-08' χ2 p-value for Mo17 x B73: '2.74e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G435373 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.131856 x 10-1 | 409 | 453 | 577 | 569 | 47.45% | 49.65% | 862 | 1146 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1339655' χ2 p-value for Mo17 x B73: '.8131856' Biased in favor of strain: '' |
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| GRMZM2G435373 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.43419 x 10-2 | 103 | 68 | 123 | 150 | 60.23% | 54.95% | 171 | 273 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0743419' χ2 p-value for Mo17 x B73: '.0000398' Biased in favor of strain: '' |
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| GRMZM2G435338 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.42 x 10-11 | 2320 | 1595 | 1809 | 1429 | 59.26% | 44.13% | 3915 | 3238 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.79e-31' χ2 p-value for Mo17 x B73: '2.42e-11' Biased in favor of strain: 'B73' |
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| GRMZM2G435338 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.17 x 10-15 | 2768 | 1038 | 1457 | 1927 | 72.73% | 56.94% | 3806 | 3384 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.17e-15' χ2 p-value for Mo17 x B73: '3.67e-33' Biased in favor of strain: 'B73' |
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| GRMZM2G435290 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.126908 x 10-1 | 9 | 12 | 23 | 9 | 42.86% | 28.12% | 21 | 32 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5126908' χ2 p-value for Mo17 x B73: '.0133283' Biased in favor of strain: '' |
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| GRMZM2G435290 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G435049 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.0583 x 10-3 | 8 | 23 | 4 | 38 | 25.81% | 90.48% | 31 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0070583' χ2 p-value for Mo17 x B73: '1.55e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G435049 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2 | 200 | 2 | 303 | 0.99% | 99.34% | 202 | 305 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '9.80e-34' Biased in favor of strain: 'Mo17' |
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| GRMZM2G435015 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.03 x 10-7 | 0 | 27 | 1 | 38 | 0.00% | 97.44% | 27 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.03e-07' χ2 p-value for Mo17 x B73: '3.13e-09' Biased in favor of strain: 'Mo17' |
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| GRMZM2G435015 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.87 x 10-5 | 0 | 21 | 0 | 35 | 0.00% | 100.00% | 21 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.12e-11' χ2 p-value for Mo17 x B73: '.0000287' Biased in favor of strain: 'Mo17' |
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| GRMZM2G435001 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.9049 x 10-2 | 4 | 13 | 10 | 40 | 23.53% | 80.00% | 17 | 50 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.029049' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: 'Mo17' |
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| GRMZM2G435001 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G434935 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.09213 x 10-2 | 2 | 10 | 5 | 24 | 16.67% | 82.76% | 12 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0209213' χ2 p-value for Mo17 x B73: '.0004184' Biased in favor of strain: 'Mo17' |
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| GRMZM2G434935 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G434696 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.1094 x 10-3 | 268 | 173 | 205 | 154 | 60.77% | 42.90% | 441 | 359 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.07e-06' χ2 p-value for Mo17 x B73: '.0071094' Biased in favor of strain: 'B73' |
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| GRMZM2G434696 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.342603 x 10-1 | 375 | 184 | 231 | 342 | 67.08% | 59.69% | 559 | 573 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8342603' χ2 p-value for Mo17 x B73: '.0003929' Biased in favor of strain: '' |
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| GRMZM2G434669 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.962534 x 10-1 | 7 | 8 | 6 | 7 | 46.67% | 53.85% | 15 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7962534' χ2 p-value for Mo17 x B73: '.7815113' Biased in favor of strain: '' |
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| GRMZM2G434669 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.185679 x 10-1 | 26 | 12 | 13 | 29 | 68.42% | 69.05% | 38 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8185679' χ2 p-value for Mo17 x B73: '.743421' Biased in favor of strain: '' |
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| GRMZM2G434561 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 16 | 0 | 1 | 0 | 100.00% | 0.00% | 16 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000633' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G434561 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.04 x 10-13 | 107 | 1 | 53 | 3 | 99.07% | 5.36% | 108 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.04e-13' χ2 p-value for Mo17 x B73: '2.19e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G434533 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.98865 x 10-2 | 141 | 179 | 162 | 194 | 44.06% | 54.49% | 320 | 356 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.033648' χ2 p-value for Mo17 x B73: '.0898865' Biased in favor of strain: '' |
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| GRMZM2G434533 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.3 x 10-10 | 15 | 54 | 15 | 141 | 21.74% | 90.38% | 69 | 156 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.44e-15' χ2 p-value for Mo17 x B73: '3.30e-10' Biased in favor of strain: 'Mo17' |
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| GRMZM2G434518 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.26 x 10-12 | 144 | 48 | 157 | 49 | 75.00% | 23.79% | 192 | 206 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.26e-12' χ2 p-value for Mo17 x B73: '5.28e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G434518 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.5014 x 10-2 | 75 | 24 | 63 | 43 | 75.76% | 40.57% | 99 | 106 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.055014' χ2 p-value for Mo17 x B73: '1.19e-08' Biased in favor of strain: '' |
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| GRMZM2G434506 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G434506 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 1 | 0.00% | 100.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0046775' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G434500 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 4 | 100.00% | 0 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G434500 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 0 | 4 | 2 | 100.00% | 33.33% | 12 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143062' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G434462 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 3 | 0.00% | 100.00% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G434462 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |