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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G60820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60810 RGF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.84471'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G60810 RGF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.60328'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G60810 RGF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.83709'
Avg. embryo expression (LCM): '0'
AT5G60810 RGF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60810 RGF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60810 RGF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60805 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G60805 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G60805 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G60805 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60805 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60805 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.4 x 10-9 100 9 7 71 91.74% 91.03% 109 78 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.9e-12'
Avg. expression score for this sample: '198.711'
Avg. expression score in LCM sample: '6.40829'
Tissue used: 'pure endosperm, no chalazal'
AT5G60800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.13 x 10-4 63 12 5 47 84.00% 90.38% 75 52 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.9e-12'
Avg. expression score for this sample: '151.403'
Avg. expression score in LCM sample: '6.40829'
Tissue used: 'full endosperm'
AT5G60800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.573 x 10-3 66 21 12 13 75.86% 52.00% 87 25 TAIR8 Avg. embryo expression (dissected): '183.35'
Avg. embryo expression (LCM): '141.121'
AT5G60800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.37801 x 10-1 11 2 84.62% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.08 x 10-4 179 3 98.35% 182 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.20732 x 10-1 157 14 91.81% 171 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60790 ABCF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 83 56 41 111 59.71% 73.03% 139 152 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.104816'
Avg. expression score for this sample: '437.35'
Avg. expression score in LCM sample: '383.645'
Tissue used: 'pure endosperm, no chalazal'
AT5G60790 ABCF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.5577 x 10-2 268 130 177 467 67.34% 72.52% 398 644 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.104816'
Avg. expression score for this sample: '545.182'
Avg. expression score in LCM sample: '383.645'
Tissue used: 'full endosperm'
AT5G60790 ABCF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.58041 x 10-1 95 96 26 33 49.74% 55.93% 191 59 TAIR8 Avg. embryo expression (dissected): '513.524'
Avg. embryo expression (LCM): '784.71'
AT5G60790 ABCF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.32548 x 10-1 100 31 76.34% 131 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60790 ABCF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.53355 x 10-1 981 386 71.76% 1367 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60790 ABCF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-13 1020 222 82.13% 1242 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60780 NRT2.3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G60780 NRT2.3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.31558'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G60780 NRT2.3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.460381'
Avg. embryo expression (LCM): '0'
AT5G60780 NRT2.3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60780 NRT2.3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60780 NRT2.3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60770 NRT2.4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.324575'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G60770 NRT2.4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.229022'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G60770 NRT2.4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G60770 NRT2.4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60770 NRT2.4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60770 NRT2.4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.9865 x 10-2 104 40 83 58 72.22% 41.13% 144 141 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000791'
Avg. expression score for this sample: '48.5222'
Avg. expression score in LCM sample: '13.0517'
Tissue used: 'pure endosperm, no chalazal'
AT5G60760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0721 x 10-2 436 159 303 304 73.28% 50.08% 595 607 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000791'
Avg. expression score for this sample: '166.295'
Avg. expression score in LCM sample: '13.0517'
Tissue used: 'full endosperm'
AT5G60760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.29 x 10-3 408 238 115 71 63.16% 38.17% 646 186 TAIR8 Avg. embryo expression (dissected): '214.104'
Avg. embryo expression (LCM): '99.8909'
AT5G60760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.5 x 10-5 37 59 38.54% 96 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.32 x 10-4 207 204 50.36% 411 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.3292 x 10-2 233 186 55.61% 419 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '141.495'
Avg. expression score in LCM sample: '55.3083'
Tissue used: 'pure endosperm, no chalazal'
AT5G60750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '134.149'
Avg. expression score in LCM sample: '55.3083'
Tissue used: 'full endosperm'
AT5G60750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '235.451'
Avg. embryo expression (LCM): '118.139'
AT5G60750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60740 ABCG28 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '.470333'
Tissue used: 'pure endosperm, no chalazal'
AT5G60740 ABCG28 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.114042'
Avg. expression score in LCM sample: '.470333'
Tissue used: 'full endosperm'
AT5G60740 ABCG28 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G60740 ABCG28 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60740 ABCG28 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60740 ABCG28 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.182113'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G60730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.850495'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G60730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.88221'
Avg. embryo expression (LCM): '11.5916'
AT5G60730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.443708'
Avg. expression score in LCM sample: '3.79206'
Tissue used: 'pure endosperm, no chalazal'
AT5G60720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.01839'
Avg. expression score in LCM sample: '3.79206'
Tissue used: 'full endosperm'
AT5G60720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '.568704'
Avg. embryo expression (LCM): '0'
AT5G60720 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60720 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.81141 x 10-1 4 8 3 3 33.33% 50.00% 12 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.63426'
Avg. expression score for this sample: '32.7932'
Avg. expression score in LCM sample: '22.3261'
Tissue used: 'pure endosperm, no chalazal'
AT5G60710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.03378 x 10-1 29 6 10 29 82.86% 74.36% 35 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.63426'
Avg. expression score for this sample: '45.2341'
Avg. expression score in LCM sample: '22.3261'
Tissue used: 'full endosperm'
AT5G60710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.51186 x 10-1 10 6 2 2 62.50% 50.00% 16 4 TAIR8 Avg. embryo expression (dissected): '70.4057'
Avg. embryo expression (LCM): '68.4945'
AT5G60710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.103 x 10-3 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.22 x 10-4 32 0 100.00% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.63 x 10-4 49 3 94.23% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '179.403'
Avg. expression score in LCM sample: '391.861'
Tissue used: 'pure endosperm, no chalazal'
AT5G60700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '185.329'
Avg. expression score in LCM sample: '391.861'
Tissue used: 'full endosperm'
AT5G60700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '98.3178'
Avg. embryo expression (LCM): '58.0457'
AT5G60700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.4 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60690 REV endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.29458 x 10-1 83 41 53 112 66.94% 67.88% 124 165 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.243957'
Avg. expression score for this sample: '340.824'
Avg. expression score in LCM sample: '364.067'
Tissue used: 'pure endosperm, no chalazal'
AT5G60690 REV endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.8266 x 10-2 85 57 86 131 59.86% 60.37% 142 217 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.243957'
Avg. expression score for this sample: '200.081'
Avg. expression score in LCM sample: '364.067'
Tissue used: 'full endosperm'
AT5G60690 REV embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.055 x 10-2 20 35 19 9 36.36% 32.14% 55 28 TAIR8 Avg. embryo expression (dissected): '159.09'
Avg. embryo expression (LCM): '134.452'
AT5G60690 REV endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.22465 x 10-1 15 7 68.18% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60690 REV endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6932 x 10-2 26 6 81.25% 32 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60690 REV endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.78675 x 10-1 38 14 73.08% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '27.9674'
Avg. expression score in LCM sample: '21.2238'
Tissue used: 'pure endosperm, no chalazal'
AT5G60680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '49.3088'
Avg. expression score in LCM sample: '21.2238'
Tissue used: 'full endosperm'
AT5G60680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '31.1925'
Avg. embryo expression (LCM): '28.7089'
AT5G60680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '329.741'
Avg. expression score in LCM sample: '191.529'
Tissue used: 'pure endosperm, no chalazal'
AT5G60670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '210.871'
Avg. expression score in LCM sample: '191.529'
Tissue used: 'full endosperm'
AT5G60670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1279.11'
Avg. embryo expression (LCM): '1824.03'
AT5G60670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G60660 PIP2;4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G60660 PIP2;4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'