Displaying data sets 46001 - 46100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G30050 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30050 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.54545 x 10-1 4 0 0 2 100.00% 100.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.102941'
Avg. expression score for this sample: '2.00493'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G30040 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.102941'
Avg. expression score for this sample: '1.80099'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G30040 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G30040 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30040 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30040 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.42857 x 10-1 0 4 0 0 0.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.688168'
Avg. expression score for this sample: '.201267'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G30030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 2 6 100.00% 75.00% 1 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.688168'
Avg. expression score for this sample: '1.75955'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G30030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 0 0 66.67% 3 0 TAIR8 Avg. embryo expression (dissected): '1.04009'
Avg. embryo expression (LCM): '0'
AT4G30030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.18585 x 10-1 107 41 82 106 72.30% 56.38% 148 188 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '49.7221'
Avg. expression score in LCM sample: '24.913'
Tissue used: 'pure endosperm, no chalazal'
AT4G30020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.91835 x 10-1 291 58 146 146 83.38% 50.00% 349 292 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '77.6445'
Avg. expression score in LCM sample: '24.913'
Tissue used: 'full endosperm'
AT4G30020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.6482 x 10-1 132 104 39 41 55.93% 51.25% 236 80 TAIR8 Avg. embryo expression (dissected): '73.8466'
Avg. embryo expression (LCM): '62.1775'
AT4G30020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.803 x 10-3 42 42 50.00% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.8 x 10-7 66 5 92.96% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.9 x 10-26 225 8 96.57% 233 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '219.434'
Avg. expression score in LCM sample: '129.621'
Tissue used: 'pure endosperm, no chalazal'
AT4G30010 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '195.991'
Avg. expression score in LCM sample: '129.621'
Tissue used: 'full endosperm'
AT4G30010 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '232.35'
Avg. embryo expression (LCM): '270.323'
AT4G30010 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30010 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30010 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '43.2085'
Avg. expression score in LCM sample: '22.9728'
Tissue used: 'pure endosperm, no chalazal'
AT4G30000 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '41.5566'
Avg. expression score in LCM sample: '22.9728'
Tissue used: 'full endosperm'
AT4G30000 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '71.2975'
Avg. embryo expression (LCM): '50.7115'
AT4G30000 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30000 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30000 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.5135'
Avg. expression score in LCM sample: '2.66032'
Tissue used: 'pure endosperm, no chalazal'
AT4G29990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.92075 x 10-1 1 3 1 2 25.00% 66.67% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '17.1768'
Avg. expression score in LCM sample: '2.66032'
Tissue used: 'full endosperm'
AT4G29990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '13.2481'
Avg. embryo expression (LCM): '6.42999'
AT4G29990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.90909 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.23597'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G29980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.50612'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G29980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.23092'
Avg. embryo expression (LCM): '0'
AT4G29980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G29970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.426719'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G29970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G29970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.81587 x 10-1 64 26 25 78 71.11% 75.73% 90 103 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.145791'
Avg. expression score for this sample: '145.211'
Avg. expression score in LCM sample: '79.31'
Tissue used: 'pure endosperm, no chalazal'
AT4G29960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.69438 x 10-1 118 47 88 186 71.52% 67.88% 165 274 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.145791'
Avg. expression score for this sample: '214.522'
Avg. expression score in LCM sample: '79.31'
Tissue used: 'full endosperm'
AT4G29960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.70474 x 10-1 32 32 12 18 50.00% 60.00% 64 30 TAIR8 Avg. embryo expression (dissected): '97.3462'
Avg. embryo expression (LCM): '48.7147'
AT4G29960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.60564 x 10-1 46 16 74.19% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.16005 x 10-1 224 72 75.68% 296 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-7 270 45 85.71% 315 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.45926 x 10-1 40 15 14 43 72.73% 75.44% 55 57 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-14'
Avg. expression score for this sample: '25.241'
Avg. expression score in LCM sample: '12.3169'
Tissue used: 'pure endosperm, no chalazal'
AT4G29950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1 x 10-15 304 43 63 286 87.61% 81.95% 347 349 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.4e-14'
Avg. expression score for this sample: '89.527'
Avg. expression score in LCM sample: '12.3169'
Tissue used: 'full endosperm'
AT4G29950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.159 x 10-2 36 17 6 12 67.92% 66.67% 53 18 TAIR8 Avg. embryo expression (dissected): '27.3019'
Avg. embryo expression (LCM): '10.5241'
AT4G29950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.18542 x 10-1 60 6 90.91% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0 x 10-6 295 20 93.65% 315 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.4 x 10-24 648 13 98.03% 661 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29940 PRHA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.7542 55 30 36 88 64.71% 70.97% 85 124 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.061857'
Avg. expression score for this sample: '210.667'
Avg. expression score in LCM sample: '46.2543'
Tissue used: 'pure endosperm, no chalazal'
AT4G29940 PRHA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.9141 x 10-2 100 22 38 89 81.97% 70.08% 122 127 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.061857'
Avg. expression score for this sample: '216.519'
Avg. expression score in LCM sample: '46.2543'
Tissue used: 'full endosperm'
AT4G29940 PRHA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.37867 x 10-1 40 36 17 27 52.63% 61.36% 76 44 TAIR8 Avg. embryo expression (dissected): '256.297'
Avg. embryo expression (LCM): '127.118'
AT4G29940 PRHA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.78698 x 10-1 14 3 82.35% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29940 PRHA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.63046 x 10-1 18 4 81.82% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29940 PRHA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.0121 x 10-2 59 12 83.10% 71 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G29930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G29930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.290031'
Avg. embryo expression (LCM): '0'
AT4G29930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.36392'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G29920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 2 0 0.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.3341'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G29920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 1 3 0 75.00% 0.00% 4 3 TAIR8 Avg. embryo expression (dissected): '46.4638'
Avg. embryo expression (LCM): '31.2834'
AT4G29920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29910 ORC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 3 4 5 62.50% 55.56% 8 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.51377'
Avg. expression score in LCM sample: '5.35004'
Tissue used: 'pure endosperm, no chalazal'
AT4G29910 ORC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 19 7 10 19 73.08% 65.52% 26 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.5039'
Avg. expression score in LCM sample: '5.35004'
Tissue used: 'full endosperm'
AT4G29910 ORC5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.08161 x 10-1 9 5 1 6 64.29% 85.71% 14 7 TAIR8 Avg. embryo expression (dissected): '14.0639'
Avg. embryo expression (LCM): '20.2444'
AT4G29910 ORC5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.0133 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29910 ORC5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.74034 x 10-1 12 3 80.00% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29910 ORC5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.328 x 10-3 28 2 93.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29905 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.02211 x 10-1 18 1 2 3 94.74% 60.00% 19 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000554'
Avg. expression score for this sample: '52.6446'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G29905 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.673 x 10-3 38 1 3 9 97.44% 75.00% 39 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000554'
Avg. expression score for this sample: '63.3592'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G29905 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 3 0 1 57.14% 100.00% 7 1 TAIR8 Avg. embryo expression (dissected): '22.8615'
Avg. embryo expression (LCM): '0'
AT4G29905 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.92047 x 10-1 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29905 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29905 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.87777 x 10-1 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29900 ACA10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.6692 x 10-2 29 14 9 53 67.44% 85.48% 43 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.185426'
Avg. expression score for this sample: '49.2513'
Avg. expression score in LCM sample: '12.9489'
Tissue used: 'pure endosperm, no chalazal'
AT4G29900 ACA10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.92006 x 10-1 36 22 17 49 62.07% 74.24% 58 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.185426'
Avg. expression score for this sample: '82.19'
Avg. expression score in LCM sample: '12.9489'
Tissue used: 'full endosperm'
AT4G29900 ACA10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.47539 x 10-1 47 42 9 24 52.81% 72.73% 89 33 TAIR8 Avg. embryo expression (dissected): '98.3495'
Avg. embryo expression (LCM): '35.704'
AT4G29900 ACA10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.8723 x 10-2 22 2 91.67% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29900 ACA10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.19 x 10-4 75 8 90.36% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29900 ACA10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.3 x 10-8 136 8 94.44% 144 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G29890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.12988 x 10-1 48 45 33 89 51.61% 72.95% 93 122 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.534304'
Avg. expression score for this sample: '102.912'
Avg. expression score in LCM sample: '57.219'
Tissue used: 'pure endosperm, no chalazal'
AT4G29890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.06996 x 10-1 126 68 40 142 64.95% 78.02% 194 182 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.534304'
Avg. expression score for this sample: '135.309'
Avg. expression score in LCM sample: '57.219'
Tissue used: 'full endosperm'