Displaying data sets 45701 - 45800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G30510 ATG18B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.67413 x 10-1 10 6 62.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30510 ATG18B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 16 4 80.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.46831 x 10-1 21 12 23 38 63.64% 62.30% 33 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.751235'
Avg. expression score for this sample: '942.566'
Avg. expression score in LCM sample: '581.17'
Tissue used: 'pure endosperm, no chalazal'
AT4G30500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.04002 x 10-1 25 8 21 57 75.76% 73.08% 33 78 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.751235'
Avg. expression score for this sample: '856.865'
Avg. expression score in LCM sample: '581.17'
Tissue used: 'full endosperm'
AT4G30500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.02478 x 10-1 14 8 6 3 63.64% 33.33% 22 9 TAIR8 Avg. embryo expression (dissected): '366.315'
Avg. embryo expression (LCM): '235.574'
AT4G30500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.23315 x 10-1 29 15 65.91% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.45496 x 10-1 31 9 77.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.6939'
Avg. expression score in LCM sample: '4.55635'
Tissue used: 'pure endosperm, no chalazal'
AT4G30490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '69.6818'
Avg. expression score in LCM sample: '4.55635'
Tissue used: 'full endosperm'
AT4G30490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '84.4286'
Avg. embryo expression (LCM): '17.5443'
AT4G30490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30480 TPR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 1 3 50.00% 75.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '137.885'
Avg. expression score in LCM sample: '37.8177'
Tissue used: 'pure endosperm, no chalazal'
AT4G30480 TPR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 7 2 2 4 77.78% 66.67% 9 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '108.309'
Avg. expression score in LCM sample: '37.8177'
Tissue used: 'full endosperm'
AT4G30480 TPR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 2 0 1 60.00% 100.00% 5 1 TAIR8 Avg. embryo expression (dissected): '109.236'
Avg. embryo expression (LCM): '106.308'
AT4G30480 TPR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30480 TPR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 14 5 73.68% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30480 TPR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.232 x 10-2 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.6859 x 10-2 24 3 1 12 88.89% 92.31% 27 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-28'
Avg. expression score for this sample: '798.66'
Avg. expression score in LCM sample: '19.269'
Tissue used: 'pure endosperm, no chalazal'
AT4G30470 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.4 x 10-27 264 34 20 294 88.59% 93.63% 298 314 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.4e-28'
Avg. expression score for this sample: '1871.89'
Avg. expression score in LCM sample: '19.269'
Tissue used: 'full endosperm'
AT4G30470 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.77512 x 10-1 10 7 4 4 58.82% 50.00% 17 8 TAIR8 Avg. embryo expression (dissected): '430.449'
Avg. embryo expression (LCM): '93.2977'
AT4G30470 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.36 x 10-4 113 0 100.00% 113 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30470 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.8 x 10-5 189 2 98.95% 191 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30470 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.7 x 10-9 510 7 98.65% 517 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.62388'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G30460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.74407'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G30460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.706381'
Avg. embryo expression (LCM): '0'
AT4G30460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.069779'
Avg. expression score for this sample: '.395702'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G30450 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.53435 x 10-1 2 7 0 0 22.22% 9 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.069779'
Avg. expression score for this sample: '2.7921'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G30450 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 3 0 1 0.00% 100.00% 3 1 TAIR8 Avg. embryo expression (dissected): '3.83698'
Avg. embryo expression (LCM): '0'
AT4G30450 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30450 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30450 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30440 GAE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.8 x 10-7 450 144 100 360 75.76% 78.26% 594 460 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '323.551'
Avg. expression score in LCM sample: '36.1863'
Tissue used: 'pure endosperm, no chalazal'
AT4G30440 GAE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1174 338 341 1494 77.65% 81.42% 1512 1835 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '719.728'
Avg. expression score in LCM sample: '36.1863'
Tissue used: 'full endosperm'
AT4G30440 GAE1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.39904 x 10-1 166 166 51 58 50.00% 53.21% 332 109 TAIR8 Avg. embryo expression (dissected): '211.609'
Avg. embryo expression (LCM): '64.1492'
AT4G30440 GAE1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.36 x 10-4 293 42 87.46% 335 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30440 GAE1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 2096 41 98.08% 2137 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30440 GAE1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 3253 70 97.89% 3323 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30430 TET9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.84516 x 10-1 114 30 79.17% 144 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30430 TET9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 1 8 33.33% 88.89% 3 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.026946'
Avg. expression score for this sample: '9.2106'
Avg. expression score in LCM sample: '9.1715'
Tissue used: 'pure endosperm, no chalazal'
AT4G30430 TET9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0239 x 10-2 10 1 2 22 90.91% 91.67% 11 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.026946'
Avg. expression score for this sample: '36.8973'
Avg. expression score in LCM sample: '9.1715'
Tissue used: 'full endosperm'
AT4G30430 TET9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.517507'
Avg. embryo expression (LCM): '0'
AT4G30430 TET9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30430 TET9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 68 11 86.08% 79 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30420 UMAMIT34 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 14 2 87.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30420 UMAMIT34 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 0 2 33.33% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.231989'
Avg. expression score for this sample: '1.62078'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G30420 UMAMIT34 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0741 x 10-2 4 0 0 10 100.00% 100.00% 4 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.231989'
Avg. expression score for this sample: '4.15844'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G30420 UMAMIT34 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G30420 UMAMIT34 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30420 UMAMIT34 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.27507 x 10-1 18 5 78.26% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G30410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.645403'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G30410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G30410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30400 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-8 93 1 98.94% 94 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.77097 x 10-1 9 3 5 12 75.00% 70.59% 12 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.393012'
Avg. expression score for this sample: '44.5353'
Avg. expression score in LCM sample: '21.8411'
Tissue used: 'pure endosperm, no chalazal'
AT4G30400 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.16842 x 10-1 31 7 17 29 81.58% 63.04% 38 46 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.393012'
Avg. expression score for this sample: '91.9809'
Avg. expression score in LCM sample: '21.8411'
Tissue used: 'full endosperm'
AT4G30400 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 8 5 1 1 61.54% 50.00% 13 2 TAIR8 Avg. embryo expression (dissected): '43.5855'
Avg. embryo expression (LCM): '44.0555'
AT4G30400 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.73676 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30400 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-5 42 0 100.00% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '205.72'
Avg. expression score in LCM sample: '73.5778'
Tissue used: 'pure endosperm, no chalazal'
AT4G30390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '364.864'
Avg. expression score in LCM sample: '73.5778'
Tissue used: 'full endosperm'
AT4G30390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '69.1292'
Avg. embryo expression (LCM): '38.693'
AT4G30390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '20.3184'
Avg. expression score in LCM sample: '15.8884'
Tissue used: 'pure endosperm, no chalazal'
AT4G30380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.57812'
Avg. expression score in LCM sample: '15.8884'
Tissue used: 'full endosperm'
AT4G30380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.01199'
Avg. embryo expression (LCM): '0'
AT4G30380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.67546 x 10-1 30 14 68.18% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.0033 x 10-2 24 16 32 33 60.00% 50.77% 40 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.391414'
Avg. expression score for this sample: '100.973'
Avg. expression score in LCM sample: '63.8477'
Tissue used: 'pure endosperm, no chalazal'
AT4G30370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.5617 x 10-2 187 65 76 179 74.21% 70.20% 252 255 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.391414'
Avg. expression score for this sample: '157.488'
Avg. expression score in LCM sample: '63.8477'
Tissue used: 'full endosperm'
AT4G30370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.80172 x 10-1 3 3 4 1 50.00% 20.00% 6 5 TAIR8 Avg. embryo expression (dissected): '34.3846'
Avg. embryo expression (LCM): '42.1466'
AT4G30370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.31354 x 10-1 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.70068 x 10-1 19 5 79.17% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30360 CNGC17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30360 CNGC17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '27.2257'
Avg. expression score in LCM sample: '17.3288'
Tissue used: 'pure endosperm, no chalazal'
AT4G30360 CNGC17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '51.1413'
Avg. expression score in LCM sample: '17.3288'
Tissue used: 'full endosperm'
AT4G30360 CNGC17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '55.7949'
Avg. embryo expression (LCM): '41.0665'
AT4G30360 CNGC17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30360 CNGC17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-23 323 13 96.13% 336 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.43127 x 10-1 70 24 36 61 74.47% 62.89% 94 97 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.20499'
Avg. expression score for this sample: '81.2073'
Avg. expression score in LCM sample: '33.6435'
Tissue used: 'pure endosperm, no chalazal'
AT4G30350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.06363 x 10-1 118 50 44 118 70.24% 72.84% 168 162 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.20499'
Avg. expression score for this sample: '128.021'
Avg. expression score in LCM sample: '33.6435'
Tissue used: 'full endosperm'
AT4G30350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.50126 x 10-1 25 18 8 4 58.14% 33.33% 43 12 TAIR8 Avg. embryo expression (dissected): '44.9509'
Avg. embryo expression (LCM): '17.4815'
AT4G30350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.76986 x 10-1 38 9 80.85% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-10 139 9 93.92% 148 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30340 DGK7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.34348 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30340 DGK7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 2 100.00% 100.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.443017'
Avg. expression score for this sample: '6.75489'
Avg. expression score in LCM sample: '3.20415'
Tissue used: 'pure endosperm, no chalazal'