Displaying data sets 45401 - 45500 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G30960 SIP3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1 x 10-18 331 39 89.46% 370 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30960 SIP3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.4 x 10-17 326 42 88.59% 368 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30950 FAD6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '342.438'
Avg. expression score in LCM sample: '141.056'
Tissue used: 'pure endosperm, no chalazal'
AT4G30950 FAD6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 1 2 4 83.33% 66.67% 6 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '355.289'
Avg. expression score in LCM sample: '141.056'
Tissue used: 'full endosperm'
AT4G30950 FAD6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 0 0 75.00% 4 0 TAIR8 Avg. embryo expression (dissected): '620.364'
Avg. embryo expression (LCM): '360.142'
AT4G30950 FAD6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30950 FAD6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.14706 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30950 FAD6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.00032 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '165.551'
Avg. expression score in LCM sample: '85.0421'
Tissue used: 'pure endosperm, no chalazal'
AT4G30940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '110.877'
Avg. expression score in LCM sample: '85.0421'
Tissue used: 'full endosperm'
AT4G30940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '61.3112'
Avg. embryo expression (LCM): '29.5754'
AT4G30940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30935 WRKY32 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 38 18 28 57 67.86% 67.06% 56 85 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.78421'
Avg. expression score for this sample: '285.784'
Avg. expression score in LCM sample: '109.867'
Tissue used: 'pure endosperm, no chalazal'
AT4G30935 WRKY32 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.98184 x 10-1 31 23 24 48 57.41% 66.67% 54 72 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.78421'
Avg. expression score for this sample: '227.491'
Avg. expression score in LCM sample: '109.867'
Tissue used: 'full endosperm'
AT4G30935 WRKY32 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 24 23 9 8 51.06% 47.06% 47 17 TAIR8 Avg. embryo expression (dissected): '205.793'
Avg. embryo expression (LCM): '83.8787'
AT4G30935 WRKY32 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.94063 x 10-1 11 3 78.57% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30935 WRKY32 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.61479 x 10-1 87 33 72.50% 120 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30935 WRKY32 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-8 163 22 88.11% 185 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30930 NFD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 2 4 75.00% 66.67% 4 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '128.604'
Avg. expression score in LCM sample: '92.7144'
Tissue used: 'pure endosperm, no chalazal'
AT4G30930 NFD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 5 2 9 37.50% 81.82% 8 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '201.77'
Avg. expression score in LCM sample: '92.7144'
Tissue used: 'full endosperm'
AT4G30930 NFD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 7.51186 x 10-1 8 12 0 0 40.00% 20 0 TAIR8 Avg. embryo expression (dissected): '405.638'
Avg. embryo expression (LCM): '746.758'
AT4G30930 NFD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30930 NFD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30930 NFD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.81804 x 10-1 11 2 84.62% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30920 LAP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.52844 x 10-1 26 7 21 39 78.79% 65.00% 33 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.746419'
Avg. expression score for this sample: '470.545'
Avg. expression score in LCM sample: '171.716'
Tissue used: 'pure endosperm, no chalazal'
AT4G30920 LAP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.24958 x 10-1 76 43 40 96 63.87% 70.59% 119 136 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.746419'
Avg. expression score for this sample: '345.505'
Avg. expression score in LCM sample: '171.716'
Tissue used: 'full endosperm'
AT4G30920 LAP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.42237 x 10-1 23 33 7 11 41.07% 61.11% 56 18 TAIR8 Avg. embryo expression (dissected): '390.015'
Avg. embryo expression (LCM): '305.073'
AT4G30920 LAP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.94663 x 10-1 16 11 59.26% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30920 LAP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 67 32 67.68% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30920 LAP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.67 x 10-4 112 21 84.21% 133 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.2763 x 10-2 59 3 13 5 95.16% 27.78% 62 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000562'
Avg. expression score for this sample: '323.316'
Avg. expression score in LCM sample: '39.4639'
Tissue used: 'pure endosperm, no chalazal'
AT4G30910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.339 x 10-3 342 8 115 34 97.71% 22.82% 350 149 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000562'
Avg. expression score for this sample: '340.831'
Avg. expression score in LCM sample: '39.4639'
Tissue used: 'full endosperm'
AT4G30910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.7758 x 10-2 20 2 3 0 90.91% 0.00% 22 3 TAIR8 Avg. embryo expression (dissected): '176.684'
Avg. embryo expression (LCM): '60.57'
AT4G30910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.1 x 10-5 5 14 26.32% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.17478 x 10-1 20 3 86.96% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.4 x 10-20 213 1 99.53% 214 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '27.5221'
Avg. expression score in LCM sample: '13.3016'
Tissue used: 'pure endosperm, no chalazal'
AT4G30900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '43.9422'
Avg. expression score in LCM sample: '13.3016'
Tissue used: 'full endosperm'
AT4G30900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '41.8868'
Avg. embryo expression (LCM): '19.2397'
AT4G30900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30890 UBP24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '130.463'
Avg. expression score in LCM sample: '122.14'
Tissue used: 'pure endosperm, no chalazal'
AT4G30890 UBP24 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '206.942'
Avg. expression score in LCM sample: '122.14'
Tissue used: 'full endosperm'
AT4G30890 UBP24 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '152.54'
Avg. embryo expression (LCM): '316.614'
AT4G30890 UBP24 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30890 UBP24 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30890 UBP24 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3055.41'
Avg. expression score in LCM sample: '96.2126'
Tissue used: 'pure endosperm, no chalazal'
AT4G30880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '942.336'
Avg. expression score in LCM sample: '96.2126'
Tissue used: 'full endosperm'
AT4G30880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '30607.6'
Avg. embryo expression (LCM): '11376.4'
AT4G30880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30872 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G30872 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.601182'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G30872 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G30872 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30872 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30872 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30870 MUS81 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 0 4 0 100.00% 0.00% 9 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.821033'
Avg. expression score for this sample: '26.2128'
Avg. expression score in LCM sample: '35.1868'
Tissue used: 'pure endosperm, no chalazal'
AT4G30870 MUS81 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.89294 x 10-1 22 2 7 2 91.67% 22.22% 24 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.821033'
Avg. expression score for this sample: '40.9809'
Avg. expression score in LCM sample: '35.1868'
Tissue used: 'full endosperm'
AT4G30870 MUS81 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.7337 x 10-1 11 1 3 0 91.67% 0.00% 12 3 TAIR8 Avg. embryo expression (dissected): '33.0761'
Avg. embryo expression (LCM): '31.1704'
AT4G30870 MUS81 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.3085 x 10-2 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30870 MUS81 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.333 x 10-3 0 6 0.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30870 MUS81 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.20838 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30860 SDG4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.84541 x 10-1 7 2 0 5 77.78% 100.00% 9 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.352023'
Avg. expression score for this sample: '13.4929'
Avg. expression score in LCM sample: '3.36582'
Tissue used: 'pure endosperm, no chalazal'
AT4G30860 SDG4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 1 2 7 75.00% 77.78% 4 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.352023'
Avg. expression score for this sample: '7.56809'
Avg. expression score in LCM sample: '3.36582'
Tissue used: 'full endosperm'
AT4G30860 SDG4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.13605 x 10-1 13 16 3 3 44.83% 50.00% 29 6 TAIR8 Avg. embryo expression (dissected): '46.4263'
Avg. embryo expression (LCM): '72.6514'
AT4G30860 SDG4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30860 SDG4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30860 SDG4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.56325 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30850 HHP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.62294 x 10-1 10 8 12 11 55.56% 47.83% 18 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.560457'
Avg. expression score for this sample: '447.03'
Avg. expression score in LCM sample: '320.885'
Tissue used: 'pure endosperm, no chalazal'
AT4G30850 HHP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.64685 x 10-1 27 7 24 68 79.41% 73.91% 34 92 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.560457'
Avg. expression score for this sample: '332.44'
Avg. expression score in LCM sample: '320.885'
Tissue used: 'full endosperm'
AT4G30850 HHP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.1593 x 10-1 15 9 4 3 62.50% 42.86% 24 7 TAIR8 Avg. embryo expression (dissected): '917.749'
Avg. embryo expression (LCM): '275.096'
AT4G30850 HHP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30850 HHP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6 x 10-4 3 11 21.43% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30850 HHP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 14 6 70.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30845 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '6.09424'
Avg. expression score in LCM sample: '7.99567'
Tissue used: 'pure endosperm, no chalazal'
AT4G30845 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.72509'
Avg. expression score in LCM sample: '7.99567'
Tissue used: 'full endosperm'
AT4G30845 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '12.1863'
Avg. embryo expression (LCM): '20.5082'
AT4G30845 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30845 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30845 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 11 14 0 13 44.00% 100.00% 25 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.700223'
Avg. expression score for this sample: '102.235'
Avg. expression score in LCM sample: '76.6496'
Tissue used: 'pure endosperm, no chalazal'
AT4G30840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.20891 x 10-1 4 2 2 17 66.67% 89.47% 6 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.700223'
Avg. expression score for this sample: '96.0131'
Avg. expression score in LCM sample: '76.6496'
Tissue used: 'full endosperm'
AT4G30840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 12 19 8 14 38.71% 63.64% 31 22 TAIR8 Avg. embryo expression (dissected): '292.801'
Avg. embryo expression (LCM): '395.834'
AT4G30840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.78854 x 10-1 32 16 66.67% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.7614 x 10-2 27 2 93.10% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 4 0.00% 100.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.277157'
Avg. expression score for this sample: '6.95719'
Avg. expression score in LCM sample: '.98476'
Tissue used: 'pure endosperm, no chalazal'
AT4G30830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.68582 x 10-1 7 1 0 7 87.50% 100.00% 8 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.277157'
Avg. expression score for this sample: '12.9948'
Avg. expression score in LCM sample: '.98476'
Tissue used: 'full endosperm'
AT4G30830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '1.47782'
Avg. embryo expression (LCM): '0'
AT4G30830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.0696 x 10-2 34 0 100.00% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.7857 x 10-2 29 0 100.00% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G30825 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 0 1 100.00% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.462137'
Avg. expression score for this sample: '23.2321'
Avg. expression score in LCM sample: '10.2885'
Tissue used: 'pure endosperm, no chalazal'
AT4G30825 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.98381 x 10-1 1 5 3 2 16.67% 40.00% 6 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.462137'
Avg. expression score for this sample: '35.7142'
Avg. expression score in LCM sample: '10.2885'
Tissue used: 'full endosperm'