| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G443445 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.54 x 10-5 | 37 | 8 | 28 | 3 | 82.22% | 9.68% | 45 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000154' χ2 p-value for Mo17 x B73: '7.12e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G443445 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.3 x 10-10 | 90 | 2 | 47 | 5 | 97.83% | 9.62% | 92 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.30e-10' χ2 p-value for Mo17 x B73: '2.61e-18' Biased in favor of strain: 'B73' |
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| GRMZM2G443444 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.63 x 10-7 | 24 | 0 | 25 | 0 | 100.00% | 0.00% | 24 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.63e-07' χ2 p-value for Mo17 x B73: '5.73e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G443444 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 3 | 8 | 1 | 72.73% | 11.11% | 11 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6698258' χ2 p-value for Mo17 x B73: '.000407' Biased in favor of strain: '' |
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| GRMZM2G443340 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.61 x 10-22 | 872 | 510 | 758 | 425 | 63.10% | 35.93% | 1382 | 1183 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.08e-22' χ2 p-value for Mo17 x B73: '3.61e-22' Biased in favor of strain: 'B73' |
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| GRMZM2G443340 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.56 x 10-7 | 1092 | 405 | 696 | 604 | 72.95% | 46.46% | 1497 | 1300 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.56e-07' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G443291 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G443291 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 3 | 0 | 100.00% | 0.00% | 7 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G443265 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.4654 x 10-3 | 1154 | 739 | 992 | 866 | 60.96% | 46.61% | 1893 | 1858 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.45e-21' χ2 p-value for Mo17 x B73: '.0034654' Biased in favor of strain: 'B73' |
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| GRMZM2G443265 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.26 x 10-6 | 814 | 293 | 516 | 455 | 73.53% | 46.86% | 1107 | 971 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.26e-06' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G443240 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 34 | 33 | 27 | 27 | 50.75% | 50.00% | 67 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9027648' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G443240 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.21671 x 10-2 | 29 | 6 | 12 | 10 | 82.86% | 45.45% | 35 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0421671' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: '' |
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| GRMZM2G443180 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.26 x 10-7 | 77 | 8 | 56 | 13 | 90.59% | 18.84% | 85 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.20e-14' χ2 p-value for Mo17 x B73: '2.26e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G443180 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.48 x 10-9 | 90 | 5 | 25 | 5 | 94.74% | 16.67% | 95 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.48e-09' χ2 p-value for Mo17 x B73: '6.27e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G442791 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 6 | 2 | 50.00% | 25.00% | 4 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G442791 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 1 | 0 | 0.00% | 0.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G442763 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 901 | 387 | 784 | 380 | 69.95% | 32.65% | 1288 | 1164 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '2.38e-32' Biased in favor of strain: 'B73' |
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| GRMZM2G442763 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.39 x 10-6 | 368 | 111 | 347 | 266 | 76.83% | 43.39% | 479 | 613 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.39e-06' χ2 p-value for Mo17 x B73: '2.33e-34' Biased in favor of strain: 'B73' |
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| GRMZM2G442658 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.467655 x 10-1 | 119 | 122 | 33 | 19 | 49.38% | 36.54% | 241 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8467655' χ2 p-value for Mo17 x B73: '.0522036' Biased in favor of strain: '' |
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| GRMZM2G442658 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.229702 x 10-1 | 142 | 103 | 124 | 222 | 57.96% | 64.16% | 245 | 346 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0038364' χ2 p-value for Mo17 x B73: '.3229702' Biased in favor of strain: '' |
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| GRMZM2G442555 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.15 x 10-7 | 47 | 117 | 79 | 159 | 28.66% | 66.81% | 164 | 238 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.60e-08' χ2 p-value for Mo17 x B73: '2.15e-07' Biased in favor of strain: 'Mo17' |
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| GRMZM2G442555 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G442551 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.25 x 10-18 | 1024 | 669 | 1100 | 633 | 60.48% | 36.53% | 1693 | 1733 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.25e-18' χ2 p-value for Mo17 x B73: '3.33e-29' Biased in favor of strain: 'B73' |
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| GRMZM2G442551 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.23923 x 10-2 | 142 | 93 | 85 | 245 | 60.43% | 74.24% | 235 | 330 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0423923' χ2 p-value for Mo17 x B73: '.0035074' Biased in favor of strain: '' |
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| GRMZM2G442546 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 1 | 8 | 1 | 85.71% | 11.11% | 7 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0587817' χ2 p-value for Mo17 x B73: '.0196307' Biased in favor of strain: '' |
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| GRMZM2G442546 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 2 | 50.00% | 100.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G442523 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 3 | 5 | 100.00% | 62.50% | 6 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G442523 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.447117 x 10-1 | 11 | 3 | 2 | 13 | 78.57% | 86.67% | 14 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3447117' χ2 p-value for Mo17 x B73: '.1003483' Biased in favor of strain: '' |
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| GRMZM2G442387 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 3 | 2 | 100.00% | 40.00% | 7 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.6547208' Biased in favor of strain: '' |
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| GRMZM2G442387 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.12 x 10-4 | 60 | 5 | 18 | 10 | 92.31% | 35.71% | 65 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000116' χ2 p-value for Mo17 x B73: '.000512' Biased in favor of strain: 'B73' |
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| GRMZM2G442265 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.270892 x 10-1 | 6 | 4 | 8 | 4 | 60.00% | 33.33% | 10 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5270892' χ2 p-value for Mo17 x B73: '.2482131' Biased in favor of strain: '' |
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| GRMZM2G442265 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G442195 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.03 x 10-15 | 454 | 165 | 370 | 186 | 73.34% | 33.45% | 619 | 556 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.42e-31' χ2 p-value for Mo17 x B73: '6.03e-15' Biased in favor of strain: 'B73' |
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| GRMZM2G442195 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1780 | 322 | 921 | 714 | 84.68% | 43.67% | 2102 | 1635 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G442128 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 0 | 1 | 0 | 100.00% | 0.00% | 5 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G442128 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 37 | 0 | 0 | 0 | 100.00% | 37 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G442057 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.394094 x 10-1 | 266 | 204 | 221 | 191 | 56.60% | 46.36% | 470 | 412 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0042385' χ2 p-value for Mo17 x B73: '.1394094' Biased in favor of strain: '' |
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| GRMZM2G442057 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.009097 x 10-1 | 238 | 98 | 160 | 289 | 70.83% | 64.37% | 336 | 449 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.10521' χ2 p-value for Mo17 x B73: '.3009097' Biased in favor of strain: '' |
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| GRMZM2G442000 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 1 | 1 | 66.67% | 50.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G442000 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.74 x 10-5 | 34 | 0 | 12 | 0 | 100.00% | 0.00% | 34 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000374' χ2 p-value for Mo17 x B73: '9.63e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G441906 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.395667 x 10-1 | 140 | 121 | 92 | 71 | 53.64% | 43.56% | 261 | 163 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2395667' χ2 p-value for Mo17 x B73: '.1000014' Biased in favor of strain: '' |
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| GRMZM2G441906 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.51 x 10-23 | 40 | 215 | 33 | 334 | 15.69% | 91.01% | 255 | 367 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '4.51e-23' Biased in favor of strain: 'Mo17' |
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| GRMZM2G441903 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.94 x 10-8 | 210 | 104 | 141 | 62 | 66.88% | 30.54% | 314 | 203 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.21e-09' χ2 p-value for Mo17 x B73: '2.94e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G441903 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.897 x 10-4 | 140 | 36 | 117 | 111 | 79.55% | 48.68% | 176 | 228 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002897' χ2 p-value for Mo17 x B73: '8.41e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G441768 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.496918 x 10-1 | 16 | 12 | 21 | 13 | 57.14% | 38.24% | 28 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4496918' χ2 p-value for Mo17 x B73: '.170067' Biased in favor of strain: '' |
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| GRMZM2G441768 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.518449 x 10-1 | 14 | 6 | 14 | 20 | 70.00% | 58.82% | 20 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7518449' χ2 p-value for Mo17 x B73: '.3319753' Biased in favor of strain: '' |
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| GRMZM2G441748 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.16169 x 10-2 | 4 | 15 | 3 | 14 | 21.05% | 82.35% | 19 | 17 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0116169' χ2 p-value for Mo17 x B73: '.0076329' Biased in favor of strain: 'Mo17' |
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| GRMZM2G441748 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.907 x 10-4 | 8 | 34 | 10 | 66 | 19.05% | 86.84% | 42 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.89e-11' χ2 p-value for Mo17 x B73: '.0001907' Biased in favor of strain: 'Mo17' |
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| GRMZM2G441722 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.929801 x 10-1 | 6 | 8 | 3 | 10 | 42.86% | 76.92% | 14 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5929801' χ2 p-value for Mo17 x B73: '.0522036' Biased in favor of strain: '' |
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| GRMZM2G441722 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 2 | 0 | 7 | 33.33% | 100.00% | 3 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206667' χ2 p-value for Mo17 x B73: '.0613688' Biased in favor of strain: '' |
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| GRMZM2G441656 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 675 | 145 | 734 | 226 | 82.32% | 23.54% | 820 | 960 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G441656 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.579 x 10-4 | 1020 | 409 | 819 | 175 | 71.38% | 17.61% | 1429 | 994 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001579' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G441541 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.136637 x 10-1 | 37 | 35 | 44 | 38 | 51.39% | 46.34% | 72 | 82 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8136637' χ2 p-value for Mo17 x B73: '.5075937' Biased in favor of strain: '' |
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| GRMZM2G441541 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.1412 x 10-2 | 21 | 0 | 23 | 22 | 100.00% | 48.89% | 21 | 45 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0011938' χ2 p-value for Mo17 x B73: '.011412' Biased in favor of strain: '' |
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| GRMZM2G441489 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.351561 x 10-1 | 87 | 60 | 62 | 71 | 59.18% | 53.38% | 147 | 133 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0259525' χ2 p-value for Mo17 x B73: '.4351561' Biased in favor of strain: '' |
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| GRMZM2G441489 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.369534 x 10-1 | 53 | 27 | 18 | 51 | 66.25% | 73.91% | 80 | 69 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9369534' χ2 p-value for Mo17 x B73: '.201643' Biased in favor of strain: '' |
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| GRMZM2G441444 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.3149 x 10-3 | 73 | 39 | 58 | 25 | 65.18% | 30.12% | 112 | 83 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013149' χ2 p-value for Mo17 x B73: '.0002921' Biased in favor of strain: 'B73' |
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| GRMZM2G441444 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 6 | 7 | 8 | 33.33% | 53.33% | 9 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0338931' χ2 p-value for Mo17 x B73: '.2733216' Biased in favor of strain: '' |
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| GRMZM2G441347 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.9791 x 10-2 | 73 | 49 | 106 | 74 | 59.84% | 41.11% | 122 | 180 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.029791' χ2 p-value for Mo17 x B73: '.0170727' Biased in favor of strain: 'B73' |
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| GRMZM2G441347 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 2 | 0 | 100.00% | 0.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.0455002' Biased in favor of strain: '' |
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| GRMZM2G441325 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.182 x 10-4 | 931 | 782 | 761 | 477 | 54.35% | 38.53% | 1713 | 1238 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003182' χ2 p-value for Mo17 x B73: '6.94e-16' Biased in favor of strain: 'B73' |
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| GRMZM2G441325 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 2.842 x 10-4 | 445 | 346 | 229 | 336 | 56.26% | 59.47% | 791 | 565 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.29e-10' χ2 p-value for Mo17 x B73: '.0002842' Biased in favor of strain: '' |
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| GRMZM2G441144 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.059032 x 10-1 | 7 | 3 | 2 | 8 | 70.00% | 80.00% | 10 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2059032' χ2 p-value for Mo17 x B73: '.0577796' Biased in favor of strain: '' |
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| GRMZM2G441144 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.399107 x 10-1 | 111 | 50 | 38 | 148 | 68.94% | 79.57% | 161 | 186 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5399107' χ2 p-value for Mo17 x B73: '.0001892' Biased in favor of strain: '' |
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| GRMZM2G441031 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 4 | 0 | 100.00% | 0.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G441031 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 2 | 66.67% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G440968 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.61 x 10-7 | 87 | 7 | 70 | 22 | 92.55% | 23.91% | 94 | 92 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.57e-16' χ2 p-value for Mo17 x B73: '5.61e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G440968 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.486405 x 10-1 | 23 | 6 | 48 | 10 | 79.31% | 17.24% | 29 | 58 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1486405' χ2 p-value for Mo17 x B73: '1.41e-15' Biased in favor of strain: '' |
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| GRMZM2G440951 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.88 x 10-10 | 62 | 10 | 58 | 3 | 86.11% | 4.92% | 72 | 61 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.88e-10' χ2 p-value for Mo17 x B73: '1.89e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G440951 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 12 | 0 | 7 | 0 | 100.00% | 0.00% | 12 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143062' χ2 p-value for Mo17 x B73: '.0001828' Biased in favor of strain: '' |
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| GRMZM2G440949 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.41 x 10-14 | 193 | 407 | 361 | 184 | 32.17% | 33.76% | 600 | 545 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.40e-18' χ2 p-value for Mo17 x B73: '3.41e-14' Biased in favor of strain: '' |
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| GRMZM2G440949 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | PEG | 0.0 | 101 | 2824 | 2142 | 217 | 3.45% | 9.20% | 2925 | 2359 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: '' |
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| GRMZM2G440943 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.11 x 10-14 | 178 | 44 | 196 | 70 | 80.18% | 26.32% | 222 | 266 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.39e-19' χ2 p-value for Mo17 x B73: '1.11e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G440943 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999998 x 10-1 | 26 | 0 | 4 | 8 | 100.00% | 66.67% | 26 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003115' χ2 p-value for Mo17 x B73: '.9999998' Biased in favor of strain: '' |
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| GRMZM2G440925 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 130 | 85 | 84 | 84 | 60.47% | 50.00% | 215 | 168 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0021479' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G440925 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.06 x 10-10 | 281 | 345 | 147 | 532 | 44.89% | 78.35% | 626 | 679 | RefGen V2 |
χ2 p-value for B73 x Mo17: '6.63e-31' χ2 p-value for Mo17 x B73: '1.06e-10' Biased in favor of strain: 'Mo17' |
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| GRMZM2G440916 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.710934 x 10-1 | 27 | 15 | 8 | 12 | 64.29% | 60.00% | 42 | 20 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0640775' χ2 p-value for Mo17 x B73: '.3710934' Biased in favor of strain: '' |
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| GRMZM2G440916 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 10 | 3 | 3 | 6 | 76.92% | 66.67% | 13 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4327761' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: '' |
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| GRMZM2G440902 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 350 | 76 | 357 | 67 | 82.16% | 15.80% | 426 | 424 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G440902 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.4891 x 10-3 | 68 | 79 | 26 | 98 | 46.26% | 79.03% | 147 | 124 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.53e-07' χ2 p-value for Mo17 x B73: '.0034891' Biased in favor of strain: 'Mo17' |
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| GRMZM2G440882 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 0 | 0.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G440882 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G440866 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.147134 x 10-1 | 133 | 160 | 116 | 154 | 45.39% | 57.04% | 293 | 270 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1147134' χ2 p-value for Mo17 x B73: '.0207443' Biased in favor of strain: '' |
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| GRMZM2G440866 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.784 x 10-4 | 145 | 39 | 77 | 39 | 78.80% | 33.62% | 184 | 116 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004784' χ2 p-value for Mo17 x B73: '4.35e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G440849 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 2 | 1 | 100.00% | 33.33% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: '' |
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| GRMZM2G440849 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G440831 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.958682 x 10-1 | 82 | 65 | 65 | 73 | 55.78% | 52.90% | 147 | 138 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1608745' χ2 p-value for Mo17 x B73: '.4958682' Biased in favor of strain: '' |
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| GRMZM2G440831 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.272436 x 10-1 | 37 | 16 | 19 | 33 | 69.81% | 63.46% | 53 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6272436' χ2 p-value for Mo17 x B73: '.6239282' Biased in favor of strain: '' |
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| GRMZM2G440820 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 2 | 0.00% | 100.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G440820 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G440695 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 10 | 3 | 4 | 0.00% | 57.14% | 10 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.705457' Biased in favor of strain: '' |
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| GRMZM2G440695 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G440614 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.3224 x 10-3 | 24 | 4 | 19 | 6 | 85.71% | 24.00% | 28 | 25 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001571' χ2 p-value for Mo17 x B73: '.0093224' Biased in favor of strain: 'B73' |
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| GRMZM2G440614 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 12 | 10 | 100.00% | 45.45% | 7 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.0348085' Biased in favor of strain: '' |
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| GRMZM2G440605 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G440605 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 1 | 0 | 100.00% | 0.00% | 3 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2206729' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G440537 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.788016 x 10-1 | 107 | 81 | 76 | 83 | 56.91% | 52.20% | 188 | 159 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0579277' χ2 p-value for Mo17 x B73: '.5788016' Biased in favor of strain: '' |
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| GRMZM2G440537 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.7231 x 10-1 | 223 | 126 | 85 | 287 | 63.90% | 77.15% | 349 | 372 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.27231' χ2 p-value for Mo17 x B73: '.0000179' Biased in favor of strain: '' |
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| GRMZM2G440529 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.098153 x 10-1 | 31 | 34 | 15 | 20 | 47.69% | 57.14% | 65 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7098153' χ2 p-value for Mo17 x B73: '.3980247' Biased in favor of strain: '' |
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| GRMZM2G440529 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |