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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G31800 WRKY18 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2957 x 10-2 47 8 85.45% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31800 WRKY18 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.29 x 10-3 72 11 86.75% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 32 9 16 21 78.05% 56.76% 41 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.141767'
Avg. expression score for this sample: '100.634'
Avg. expression score in LCM sample: '57.851'
Tissue used: 'pure endosperm, no chalazal'
AT4G31790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.18325 x 10-1 82 32 54 146 71.93% 73.00% 114 200 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.141767'
Avg. expression score for this sample: '158.608'
Avg. expression score in LCM sample: '57.851'
Tissue used: 'full endosperm'
AT4G31790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.00937 x 10-1 54 53 10 12 50.47% 54.55% 107 22 TAIR8 Avg. embryo expression (dissected): '261.314'
Avg. embryo expression (LCM): '327.842'
AT4G31790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.01255 x 10-1 24 6 80.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.2429 x 10-1 109 55 66.46% 164 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.647 x 10-3 173 39 81.60% 212 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31780 MGD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.63828 x 10-1 90 48 35 108 65.22% 75.52% 138 143 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002192'
Avg. expression score for this sample: '83.2467'
Avg. expression score in LCM sample: '22.8847'
Tissue used: 'pure endosperm, no chalazal'
AT4G31780 MGD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.034 x 10-3 122 72 55 270 62.89% 83.08% 194 325 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002192'
Avg. expression score for this sample: '105.232'
Avg. expression score in LCM sample: '22.8847'
Tissue used: 'full endosperm'
AT4G31780 MGD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.94521 x 10-1 107 144 37 58 42.63% 61.05% 251 95 TAIR8 Avg. embryo expression (dissected): '157.518'
Avg. embryo expression (LCM): '79.4707'
AT4G31780 MGD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.05347 x 10-1 35 10 77.78% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31780 MGD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.5484 x 10-2 246 62 79.87% 308 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31780 MGD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.94 x 10-3 200 40 83.33% 240 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31770 DBR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.3517'
Avg. expression score in LCM sample: '19.5776'
Tissue used: 'pure endosperm, no chalazal'
AT4G31770 DBR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '31.4352'
Avg. expression score in LCM sample: '19.5776'
Tissue used: 'full endosperm'
AT4G31770 DBR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '37.8611'
Avg. embryo expression (LCM): '41.054'
AT4G31770 DBR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31770 DBR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.33333 x 10-1 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31770 DBR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.33333 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.287 x 10-3 21 32 22 28 39.62% 56.00% 53 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005262'
Avg. expression score for this sample: '38.8691'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G31760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.1913 40 29 22 32 57.97% 59.26% 69 54 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005262'
Avg. expression score for this sample: '32.0484'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G31760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 412 490 72 150 45.68% 67.57% 902 222 TAIR8 Avg. embryo expression (dissected): '599.233'
Avg. embryo expression (LCM): '552.728'
AT4G31760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.9087 x 10-2 2 9 18.18% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.6643 x 10-2 24 10 70.59% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.5 x 10-6 11 43 20.37% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31750 WIN2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '177.949'
Avg. expression score in LCM sample: '46.2837'
Tissue used: 'pure endosperm, no chalazal'
AT4G31750 WIN2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '154.55'
Avg. expression score in LCM sample: '46.2837'
Tissue used: 'full endosperm'
AT4G31750 WIN2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '166.201'
Avg. embryo expression (LCM): '83.4894'
AT4G31750 WIN2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31750 WIN2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31750 WIN2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323077'
Avg. expression score for this sample: '1.49658'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G31740 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.23077 x 10-1 3 1 0 4 75.00% 100.00% 4 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323077'
Avg. expression score for this sample: '4.38807'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G31740 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.564829'
Avg. embryo expression (LCM): '0'
AT4G31740 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31740 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31740 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31730 GDU1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '44.5362'
Avg. expression score in LCM sample: '1.94012'
Tissue used: 'pure endosperm, no chalazal'
AT4G31730 GDU1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '104.787'
Avg. expression score in LCM sample: '1.94012'
Tissue used: 'full endosperm'
AT4G31730 GDU1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '27.4033'
Avg. embryo expression (LCM): '4.96064'
AT4G31730 GDU1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31730 GDU1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31730 GDU1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31720 TAFII15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 3 1 2 62.50% 66.67% 8 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.423585'
Avg. expression score for this sample: '258.177'
Avg. expression score in LCM sample: '124.624'
Tissue used: 'pure endosperm, no chalazal'
AT4G31720 TAFII15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.65329 x 10-1 14 1 10 25 93.33% 71.43% 15 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.423585'
Avg. expression score for this sample: '301.743'
Avg. expression score in LCM sample: '124.624'
Tissue used: 'full endosperm'
AT4G31720 TAFII15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 4 0 3 42.86% 100.00% 7 3 TAIR8 Avg. embryo expression (dissected): '408.939'
Avg. embryo expression (LCM): '370.491'
AT4G31720 TAFII15 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31720 TAFII15 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.30616 x 10-1 58 14 80.56% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31720 TAFII15 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.98029 x 10-1 59 13 81.94% 72 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31710 GLR2.4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 3 2 100.00% 40.00% 1 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '55.6641'
Avg. expression score in LCM sample: '152.932'
Tissue used: 'pure endosperm, no chalazal'
AT4G31710 GLR2.4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '16.2417'
Avg. expression score in LCM sample: '152.932'
Tissue used: 'full endosperm'
AT4G31710 GLR2.4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.37366'
Avg. embryo expression (LCM): '3.26523'
AT4G31710 GLR2.4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31710 GLR2.4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31710 GLR2.4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31700 RPS6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.06485 x 10-1 6 11 3 16 35.29% 84.21% 17 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.120179'
Avg. expression score for this sample: '3157.56'
Avg. expression score in LCM sample: '2447.19'
Tissue used: 'pure endosperm, no chalazal'
AT4G31700 RPS6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.4715 x 10-2 32 31 42 176 50.79% 80.73% 63 218 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.120179'
Avg. expression score for this sample: '3002.3'
Avg. expression score in LCM sample: '2447.19'
Tissue used: 'full endosperm'
AT4G31700 RPS6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.6693 x 10-2 12 47 4 9 20.34% 69.23% 59 13 TAIR8 Avg. embryo expression (dissected): '9202.92'
Avg. embryo expression (LCM): '13021'
AT4G31700 RPS6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.73143 x 10-1 23 5 82.14% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31700 RPS6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.89 x 10-4 374 79 82.56% 453 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31700 RPS6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.8234 x 10-1 219 97 69.30% 316 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31695 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G31695 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G31695 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G31695 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31695 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31695 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G31690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.52443'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G31690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.749825'
Avg. embryo expression (LCM): '3.64199'
AT4G31690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.34649'
Avg. expression score in LCM sample: '1.05825'
Tissue used: 'pure endosperm, no chalazal'
AT4G31680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.70442'
Avg. expression score in LCM sample: '1.05825'
Tissue used: 'full endosperm'
AT4G31680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 2 7 3 71.43% 30.00% 7 10 TAIR8 Avg. embryo expression (dissected): '89.0996'
Avg. embryo expression (LCM): '140.644'
AT4G31680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31670 UBP18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '115.795'
Avg. expression score in LCM sample: '46.6659'
Tissue used: 'pure endosperm, no chalazal'
AT4G31670 UBP18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '103.59'
Avg. expression score in LCM sample: '46.6659'
Tissue used: 'full endosperm'
AT4G31670 UBP18 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '100.145'
Avg. embryo expression (LCM): '29.161'
AT4G31670 UBP18 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31670 UBP18 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31670 UBP18 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G31660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.28774'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G31660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.68241'
Avg. embryo expression (LCM): '7.44724'
AT4G31660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.96741 x 10-1 29 22 24 57 56.86% 70.37% 51 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.792906'
Avg. expression score for this sample: '57.745'
Avg. expression score in LCM sample: '18.9162'
Tissue used: 'pure endosperm, no chalazal'
AT4G31650 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.79077 x 10-1 80 63 69 174 55.94% 71.60% 143 243 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.792906'
Avg. expression score for this sample: '123.448'
Avg. expression score in LCM sample: '18.9162'
Tissue used: 'full endosperm'
AT4G31650 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.52024 x 10-1 40 75 22 29 34.78% 56.86% 115 51 TAIR8 Avg. embryo expression (dissected): '95.0705'
Avg. embryo expression (LCM): '35.7417'
AT4G31650 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.7725 x 10-2 25 5 83.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31650 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8162 x 10-2 41 9 82.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31650 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.08 x 10-4 1 10 9.09% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G31640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.236109'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G31640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.666401'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'