| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G32640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.5169 x 10-1 | 1 | 2 | 33.33% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32640 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 5.39174 x 10-1 | 19 | 3 | 86.36% | 22 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32630 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.678 x 10-3 | 16 | 0 | 100.00% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.728282' Avg. expression score for this sample: '2.96823' Avg. expression score in LCM sample: '2.99837' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G32630 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 7.15987 x 10-1 | 8 | 4 | 3 | 1 | 66.67% | 25.00% | 12 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.728282' Avg. expression score for this sample: '10.3103' Avg. expression score in LCM sample: '2.99837' Tissue used: 'full endosperm' |
|||||
| AT4G32630 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '9.25575' Avg. embryo expression (LCM): '0' |
||||||
| AT4G32630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G32630 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G32620 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.5 x 10-6 | 445 | 84 | 84.12% | 529 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.35438 x 10-1 | 145 | 47 | 68 | 119 | 75.52% | 63.64% | 192 | 187 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000131' Avg. expression score for this sample: '219.689' Avg. expression score in LCM sample: '170.275' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G32620 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.1 x 10-5 | 321 | 80 | 130 | 329 | 80.05% | 71.68% | 401 | 459 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.000131' Avg. expression score for this sample: '346.643' Avg. expression score in LCM sample: '170.275' Tissue used: 'full endosperm' |
|||||
| AT4G32620 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.35779 x 10-1 | 108 | 98 | 38 | 37 | 52.43% | 49.33% | 206 | 75 | TAIR8 |
Avg. embryo expression (dissected): '247.756' Avg. embryo expression (LCM): '213.91' |
||||
| AT4G32620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.00094 x 10-1 | 64 | 21 | 75.29% | 85 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32620 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.0 x 10-7 | 291 | 44 | 86.87% | 335 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32610 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G32610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '510.473' Avg. expression score in LCM sample: '111.337' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G32610 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '791.544' Avg. expression score in LCM sample: '111.337' Tissue used: 'full endosperm' |
|||||||
| AT4G32610 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '625.417' Avg. embryo expression (LCM): '428.084' |
||||||
| AT4G32610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G32610 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G32605 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.3121 x 10-1 | 33 | 6 | 84.62% | 39 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32605 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 3 | 1 | 100.00% | 25.00% | 3 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '60.5236' Avg. expression score in LCM sample: '44.6376' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G32605 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 11 | 2 | 4 | 2 | 84.62% | 33.33% | 13 | 6 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '80.9816' Avg. expression score in LCM sample: '44.6376' Tissue used: 'full endosperm' |
|||||
| AT4G32605 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.28308 x 10-1 | 9 | 3 | 1 | 0 | 75.00% | 0.00% | 12 | 1 | TAIR8 |
Avg. embryo expression (dissected): '199.904' Avg. embryo expression (LCM): '211.122' |
||||
| AT4G32605 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32605 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.87136 x 10-1 | 14 | 16 | 46.67% | 30 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32600 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 2 | 0 | 1 | 66.67% | 100.00% | 6 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '41.2679' Avg. expression score in LCM sample: '26.1623' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT4G32600 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '65.8586' Avg. expression score in LCM sample: '26.1623' Tissue used: 'full endosperm' |
||||||
| AT4G32600 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '49.6393' Avg. embryo expression (LCM): '38.5046' |
|||||
| AT4G32600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.85714 x 10-1 | 6 | 0 | 100.00% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32600 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32590 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G32590 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '100.036' Avg. expression score in LCM sample: '13.8895' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G32590 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '99.0327' Avg. expression score in LCM sample: '13.8895' Tissue used: 'full endosperm' |
|||||||
| AT4G32590 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '166.977' Avg. embryo expression (LCM): '254.223' |
||||||
| AT4G32590 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G32590 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G32580 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G32580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
|||||||
| AT4G32580 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT4G32580 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT4G32580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G32580 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G32570 | TIFY8 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32570 | TIFY8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '57.9122' Avg. expression score in LCM sample: '52.1629' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G32570 | TIFY8 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '39.2093' Avg. expression score in LCM sample: '52.1629' Tissue used: 'full endosperm' |
||||||
| AT4G32570 | TIFY8 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '52.1873' Avg. embryo expression (LCM): '69.0471' |
|||||
| AT4G32570 | TIFY8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32570 | TIFY8 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32560 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.8571 x 10-2 | 4 | 0 | 100.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.4' Avg. expression score for this sample: '45.9972' Avg. expression score in LCM sample: '23.8106' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G32560 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.4' Avg. expression score for this sample: '58.848' Avg. expression score in LCM sample: '23.8106' Tissue used: 'full endosperm' |
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| AT4G32560 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '44.0371' Avg. embryo expression (LCM): '24.6274' |
||||
| AT4G32560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32560 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.42857 x 10-1 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32551 | LUG | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.02433 x 10-1 | 105 | 72 | 59.32% | 177 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G32551 | LUG | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.0441 x 10-2 | 99 | 108 | 79 | 193 | 47.83% | 70.96% | 207 | 272 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.725979' Avg. expression score for this sample: '2807.51' Avg. expression score in LCM sample: '642.137' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G32551 | LUG | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.52787 x 10-1 | 109 | 49 | 69 | 186 | 68.99% | 72.94% | 158 | 255 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.725979' Avg. expression score for this sample: '1046.47' Avg. expression score in LCM sample: '642.137' Tissue used: 'full endosperm' |
||||
| AT4G32551 | LUG | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.47194 x 10-1 | 123 | 169 | 43 | 47 | 42.12% | 52.22% | 292 | 90 | TAIR8 |
Avg. embryo expression (dissected): '4161.16' Avg. embryo expression (LCM): '1939.45' |
|||
| AT4G32551 | LUG | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.21792 x 10-1 | 32 | 11 | 74.42% | 43 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G32551 | LUG | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.05352 x 10-1 | 56 | 20 | 73.68% | 76 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G32540 | YUC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32540 | YUC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.577943' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G32540 | YUC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.94117' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||
| AT4G32540 | YUC1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 1 | 1 | 1 | 50.00% | 50.00% | 2 | 2 | TAIR8 |
Avg. embryo expression (dissected): '8.30559' Avg. embryo expression (LCM): '7.5477' |
|||
| AT4G32540 | YUC1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32540 | YUC1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32530 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.5 x 10-13 | 224 | 7 | 96.97% | 231 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.56449 x 10-1 | 38 | 8 | 10 | 13 | 82.61% | 56.52% | 46 | 23 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.005354' Avg. expression score for this sample: '1276.65' Avg. expression score in LCM sample: '474.713' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G32530 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.18 x 10-3 | 123 | 12 | 57 | 106 | 91.11% | 65.03% | 135 | 163 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.005354' Avg. expression score for this sample: '686.258' Avg. expression score in LCM sample: '474.713' Tissue used: 'full endosperm' |
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| AT4G32530 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.31799 x 10-1 | 22 | 10 | 2 | 1 | 68.75% | 33.33% | 32 | 3 | TAIR8 |
Avg. embryo expression (dissected): '1245.49' Avg. embryo expression (LCM): '377.021' |
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| AT4G32530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.6954 x 10-1 | 12 | 7 | 63.16% | 19 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32530 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.18 x 10-4 | 113 | 72 | 61.08% | 185 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32520 | SHM3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.73095 x 10-1 | 50 | 22 | 69.44% | 72 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G32520 | SHM3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 21 | 17 | 4 | 22 | 55.26% | 84.62% | 38 | 26 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.511126' Avg. expression score for this sample: '37.3854' Avg. expression score in LCM sample: '30.748' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G32520 | SHM3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.5801 x 10-1 | 23 | 6 | 12 | 30 | 79.31% | 71.43% | 29 | 42 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.511126' Avg. expression score for this sample: '51.5063' Avg. expression score in LCM sample: '30.748' Tissue used: 'full endosperm' |
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| AT4G32520 | SHM3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.0502 x 10-2 | 32 | 68 | 13 | 11 | 32.00% | 45.83% | 100 | 24 | TAIR8 |
Avg. embryo expression (dissected): '113.723' Avg. embryo expression (LCM): '202.959' |
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| AT4G32520 | SHM3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.37088 x 10-1 | 14 | 2 | 87.50% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G32520 | SHM3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.49333 x 10-1 | 38 | 9 | 80.85% | 47 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G32510 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G32510 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '1.6384' Avg. expression score in LCM sample: '.7055' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G32510 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '.92503' Avg. expression score in LCM sample: '.7055' Tissue used: 'full endosperm' |
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| AT4G32510 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.08672' Avg. embryo expression (LCM): '.602812' |
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| AT4G32510 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G32510 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G32500 | KT5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.99583 x 10-1 | 14 | 1 | 93.33% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G32500 | KT5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 2.55142 x 10-1 | 26 | 11 | 5 | 26 | 70.27% | 83.87% | 37 | 31 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.088498' Avg. expression score for this sample: '106.322' Avg. expression score in LCM sample: '78.3693' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G32500 | KT5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.84773 x 10-1 | 28 | 4 | 3 | 1 | 87.50% | 25.00% | 32 | 4 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.088498' Avg. expression score for this sample: '141.95' Avg. expression score in LCM sample: '78.3693' Tissue used: 'full endosperm' |
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| AT4G32500 | KT5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.81818 x 10-1 | 0 | 3 | 3 | 0 | 0.00% | 0.00% | 3 | 3 | TAIR8 |
Avg. embryo expression (dissected): '46.687' Avg. embryo expression (LCM): '23.9492' |
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| AT4G32500 | KT5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.23 x 10-4 | 3 | 9 | 25.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G32500 | KT5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.41181 x 10-1 | 7 | 0 | 100.00% | 7 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G32490 | ENODL4 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 7.2 x 10-8 | 832 | 302 | 73.37% | 1134 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G32490 | ENODL4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.50252 x 10-1 | 6950 | 2585 | 3283 | 4662 | 72.89% | 58.68% | 9535 | 7945 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.01003' Avg. expression score for this sample: '54077.9' Avg. expression score in LCM sample: '61319.1' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G32490 | ENODL4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.232 x 10-3 | 6689 | 2725 | 4433 | 6741 | 71.05% | 60.33% | 9414 | 11174 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.01003' Avg. expression score for this sample: '28409.6' Avg. expression score in LCM sample: '61319.1' Tissue used: 'full endosperm' |
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| AT4G32490 | ENODL4 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.5 x 10-7 | 548 | 301 | 165 | 165 | 64.55% | 50.00% | 849 | 330 | TAIR8 |
Avg. embryo expression (dissected): '6207.45' Avg. embryo expression (LCM): '1867.47' |
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| AT4G32490 | ENODL4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 8.8 x 10-7 | 805 | 554 | 59.23% | 1359 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G32490 | ENODL4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.1 x 10-6 | 92 | 16 | 85.19% | 108 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G32480 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.2421 x 10-2 | 105 | 4 | 96.33% | 109 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G32480 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.3382 x 10-2 | 14 | 0 | 0 | 2 | 100.00% | 100.00% | 14 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.00779' Avg. expression score for this sample: '94.5611' Avg. expression score in LCM sample: '1.29342' Tissue used: 'pure endosperm, no chalazal' |