GehringPlant

Gene ID	Tissue	Study	Parent A	Parent B	Stage	Replicate	Replicate Imprinting Status	Overall Imprinting Status	Imprinting p-value	A x B, A counts	A x B, B counts	B x A, A counts	B x A, B counts	% Maternal AxB	% Maternal BxA	Tot Counts AxB	Tot Counts BxA	Genome Assembly	Notes
GRMZM2G445905	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.09 x 10^-5	578	732	549	827	44.12%	60.10%	1310	1376	RefGen V2	χ2 p-value for B73 x Mo17: '.0000209' χ2 p-value for Mo17 x B73: '6.66e-14' Biased in favor of strain: 'Mo17'
GRMZM2G445905	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.026448 x 10^-1	679	466	425	799	59.30%	65.28%	1145	1224	RefGen V2	χ2 p-value for B73 x Mo17: '1.24e-07' χ2 p-value for Mo17 x B73: '.3026448' Biased in favor of strain: ''
GRMZM2G445684	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.30954 x 10^-1	21	18	37	20	53.85%	35.09%	39	57	RefGen V2	χ2 p-value for B73 x Mo17: '.630954' χ2 p-value for Mo17 x B73: '.0243409' Biased in favor of strain: ''
GRMZM2G445684	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G445634	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.946552 x 10^-1	491	388	78	89	55.86%	53.29%	879	167	RefGen V2	χ2 p-value for B73 x Mo17: '.0005126' χ2 p-value for Mo17 x B73: '.3946552' Biased in favor of strain: ''
GRMZM2G445634	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.47235 x 10^-2	167	50	127	200	76.96%	61.16%	217	327	RefGen V2	χ2 p-value for B73 x Mo17: '.0012997' χ2 p-value for Mo17 x B73: '.0347235' Biased in favor of strain: ''
GRMZM2G445617	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.188234 x 10^-1	71	45	53	48	61.21%	47.52%	116	101	RefGen V2	χ2 p-value for B73 x Mo17: '.0157768' χ2 p-value for Mo17 x B73: '.6188234' Biased in favor of strain: ''
GRMZM2G445617	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.278907 x 10^-1	41	20	13	29	67.21%	69.05%	61	42	RefGen V2	χ2 p-value for B73 x Mo17: '.9278907' χ2 p-value for Mo17 x B73: '.743421' Biased in favor of strain: ''
GRMZM2G445616	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	9	4	13	0.00%	76.47%	9	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.029049' Biased in favor of strain: ''
GRMZM2G445616	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.63945 x 10^-2	10	43	13	48	18.87%	78.69%	53	61	RefGen V2	χ2 p-value for B73 x Mo17: '1.56e-13' χ2 p-value for Mo17 x B73: '.0463945' Biased in favor of strain: ''
GRMZM2G445602	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.800004 x 10^-1	117	91	73	84	56.25%	53.50%	208	157	RefGen V2	χ2 p-value for B73 x Mo17: '.0714235' χ2 p-value for Mo17 x B73: '.3800004' Biased in favor of strain: ''
GRMZM2G445602	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	1	0	1	88.89%	100.00%	9	1	RefGen V2	χ2 p-value for B73 x Mo17: '.157302' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: ''
GRMZM2G445575	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	4	1	0.00%	20.00%	3	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.1797125' Biased in favor of strain: ''
GRMZM2G445575	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	2	100.00%	100.00%	1	2	RefGen V2	χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G445478	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.936464 x 10^-1	12	5	18	11	70.59%	37.93%	17	29	RefGen V2	χ2 p-value for B73 x Mo17: '.0895551' χ2 p-value for Mo17 x B73: '.1936464' Biased in favor of strain: ''
GRMZM2G445478	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	5	0.00%	100.00%	2	5	RefGen V2	χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.1138463' Biased in favor of strain: ''
GRMZM2G445384	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	1	1	2	75.00%	66.67%	4	3	RefGen V2	χ2 p-value for B73 x Mo17: '.3173105' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G445384	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	0	0	0	100.00%		4	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G445169	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.86 x 10^-25	1163	566	1258	793	67.26%	38.66%	1729	2051	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '9.86e-25' Biased in favor of strain: 'B73'
GRMZM2G445169	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.1373 x 10^-1	103	56	238	174	64.78%	42.23%	159	412	RefGen V2	χ2 p-value for B73 x Mo17: '.61373' χ2 p-value for Mo17 x B73: '6.94e-26' Biased in favor of strain: ''
GRMZM2G445163	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.83 x 10^-15	671	329	507	287	67.10%	36.15%	1000	794	RefGen V2	χ2 p-value for B73 x Mo17: '2.92e-27' χ2 p-value for Mo17 x B73: '5.83e-15' Biased in favor of strain: 'B73'
GRMZM2G445163	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.884732 x 10^-1	669	311	473	627	68.27%	57.00%	980	1100	RefGen V2	χ2 p-value for B73 x Mo17: '.2884732' χ2 p-value for Mo17 x B73: '1.04e-11' Biased in favor of strain: ''
GRMZM2G445100	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1162	493	978	524	70.21%	34.89%	1655	1502	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.08e-31' Biased in favor of strain: 'B73'
GRMZM2G445100	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.06563 x 10^-2	529	228	367	522	69.88%	58.72%	757	889	RefGen V2	χ2 p-value for B73 x Mo17: '.0606563' χ2 p-value for Mo17 x B73: '4.96e-07' Biased in favor of strain: ''
GRMZM2G445059	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.0 x 10^-29	294	59	249	54	83.29%	17.82%	353	303	RefGen V2	χ2 p-value for B73 x Mo17: '6.77e-36' χ2 p-value for Mo17 x B73: '3.97e-29' Biased in favor of strain: 'B73'
GRMZM2G445059	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0 x 10^-30	308	9	161	16	97.16%	9.04%	317	177	RefGen V2	χ2 p-value for B73 x Mo17: '1.08e-30' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G445057	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.62 x 10^-18	455	174	489	254	72.34%	34.19%	629	743	RefGen V2	χ2 p-value for B73 x Mo17: '3.89e-29' χ2 p-value for Mo17 x B73: '6.62e-18' Biased in favor of strain: 'B73'
GRMZM2G445057	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1887	297	793	516	86.40%	39.42%	2184	1309	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G444874	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	14	0	9	0.00%	100.00%	14	9	RefGen V2	χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: ''
GRMZM2G444874	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.402 x 10^-4	2	16	0	29	11.11%	100.00%	18	29	RefGen V2	χ2 p-value for B73 x Mo17: '5.73e-07' χ2 p-value for Mo17 x B73: '.0001402' Biased in favor of strain: 'Mo17'
GRMZM2G444845	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	47	46	38	38	50.54%	50.00%	93	76	RefGen V2	χ2 p-value for B73 x Mo17: '.9174113' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G444845	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.77 x 10^-5	64	1	11	2	98.46%	15.38%	65	13	RefGen V2	χ2 p-value for B73 x Mo17: '5.40e-08' χ2 p-value for Mo17 x B73: '.0000877' Biased in favor of strain: 'B73'
GRMZM2G444808	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	2882	1650	2442	1307	63.59%	34.86%	4532	3749	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G444808	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.57 x 10^-9	2385	953	1410	1690	71.45%	54.52%	3338	3100	RefGen V2	χ2 p-value for B73 x Mo17: '4.57e-09' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G444801	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.53 x 10^-5	1437	1035	1953	1709	58.13%	46.67%	2472	3662	RefGen V2	χ2 p-value for B73 x Mo17: '6.20e-16' χ2 p-value for Mo17 x B73: '.0000553' Biased in favor of strain: 'B73'
GRMZM2G444801	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.709114 x 10^-1	480	148	125	251	76.43%	66.76%	628	376	RefGen V2	χ2 p-value for B73 x Mo17: '2.08e-07' χ2 p-value for Mo17 x B73: '.9709114' Biased in favor of strain: ''
GRMZM2G444762	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	4	1	0	33.33%	0.00%	6	1	RefGen V2	χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: ''
GRMZM2G444762	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	0	0			0	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G444692	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		3	0	1	2	100.00%	66.67%	3	3	RefGen V2	χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.5637029' Biased in favor of strain: ''
GRMZM2G444692	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		5	1	1	4	83.33%	80.00%	6	5	RefGen V2	χ2 p-value for B73 x Mo17: '.386481' χ2 p-value for Mo17 x B73: '.5270893' Biased in favor of strain: ''
GRMZM2G444643	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.73 x 10^-12	467	233	343	186	66.71%	35.16%	700	529	RefGen V2	χ2 p-value for B73 x Mo17: '9.20e-19' χ2 p-value for Mo17 x B73: '8.73e-12' Biased in favor of strain: 'B73'
GRMZM2G444643	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.33 x 10^-7	505	161	366	302	75.83%	45.21%	666	668	RefGen V2	χ2 p-value for B73 x Mo17: '5.33e-07' χ2 p-value for Mo17 x B73: '5.96e-32' Biased in favor of strain: 'B73'
GRMZM2G444621	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.35 x 10^-5	91	41	83	30	68.94%	26.55%	132	113	RefGen V2	χ2 p-value for B73 x Mo17: '.0000135' χ2 p-value for Mo17 x B73: '6.17e-07' Biased in favor of strain: 'B73'
GRMZM2G444621	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	6	44	65	25.00%	59.63%	8	109	RefGen V2	χ2 p-value for B73 x Mo17: '.0124186' χ2 p-value for Mo17 x B73: '.1192908' Biased in favor of strain: ''
GRMZM2G444560	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		7	1	12	3	87.50%	20.00%	8	15	RefGen V2	χ2 p-value for B73 x Mo17: '.0338949' χ2 p-value for Mo17 x B73: '.0201368' Biased in favor of strain: ''
GRMZM2G444560	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.83 x 10^-5	38	0	23	12	100.00%	34.29%	38	35	RefGen V2	χ2 p-value for B73 x Mo17: '.0000131' χ2 p-value for Mo17 x B73: '.0000483' Biased in favor of strain: 'B73'
GRMZM2G444543	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.564407 x 10^-1	139	136	101	82	50.55%	44.81%	275	183	RefGen V2	χ2 p-value for B73 x Mo17: '.8564407' χ2 p-value for Mo17 x B73: '.1601639' Biased in favor of strain: ''
GRMZM2G444543	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.23932 x 10^-2	41	46	60	159	47.13%	72.60%	87	219	RefGen V2	χ2 p-value for B73 x Mo17: '.0001105' χ2 p-value for Mo17 x B73: '.0623932' Biased in favor of strain: ''
GRMZM2G444533	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.95551 x 10^-2	58	20	41	27	74.36%	39.71%	78	68	RefGen V2	χ2 p-value for B73 x Mo17: '.0000169' χ2 p-value for Mo17 x B73: '.0895551' Biased in favor of strain: ''
GRMZM2G444533	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.71036 x 10^-2	29	7	15	6	80.56%	28.57%	36	21	RefGen V2	χ2 p-value for B73 x Mo17: '.0771036' χ2 p-value for Mo17 x B73: '.0002128' Biased in favor of strain: ''
GRMZM2G444383	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.03 x 10^-18	0	114	0	78	0.00%	100.00%	114	78	RefGen V2	χ2 p-value for B73 x Mo17: '1.30e-26' χ2 p-value for Mo17 x B73: '1.03e-18' Biased in favor of strain: 'Mo17'
GRMZM2G444383	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.52 x 10^-10	0	77	0	82	0.00%	100.00%	77	82	RefGen V2	χ2 p-value for B73 x Mo17: '2.31e-35' χ2 p-value for Mo17 x B73: '1.52e-10' Biased in favor of strain: 'Mo17'
GRMZM2G444378	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.28 x 10^-11	59	0	44	0	100.00%	0.00%	59	44	RefGen V2	χ2 p-value for B73 x Mo17: '1.58e-14' χ2 p-value for Mo17 x B73: '3.28e-11' Biased in favor of strain: 'B73'
GRMZM2G444378	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.828 x 10^-4	28	0	14	0	100.00%	0.00%	28	14	RefGen V2	χ2 p-value for B73 x Mo17: '.0001828' χ2 p-value for Mo17 x B73: '1.21e-07' Biased in favor of strain: 'B73'
GRMZM2G444222	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	5.73 x 10^-5	137	78	205	84	63.72%	29.07%	215	289	RefGen V2	χ2 p-value for B73 x Mo17: '.0000573' χ2 p-value for Mo17 x B73: '1.10e-12' Biased in favor of strain: 'B73'
GRMZM2G444222	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.231093 x 10^-1	108	52	67	109	67.50%	61.93%	160	176	RefGen V2	χ2 p-value for B73 x Mo17: '.8231093' χ2 p-value for Mo17 x B73: '.1826942' Biased in favor of strain: ''
GRMZM2G444075	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0 x 10^-30	447	157	443	159	74.01%	26.41%	604	602	RefGen V2	χ2 p-value for B73 x Mo17: '3.91e-32' χ2 p-value for Mo17 x B73: '5.52e-31' Biased in favor of strain: 'B73'
GRMZM2G444075	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.03 x 10^-6	51	1	19	6	98.08%	24.00%	52	25	RefGen V2	χ2 p-value for B73 x Mo17: '1.55e-06' χ2 p-value for Mo17 x B73: '6.03e-06' Biased in favor of strain: 'B73'
GRMZM2G444029	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.003766 x 10^-1	269	278	171	319	49.18%	65.10%	547	490	RefGen V2	χ2 p-value for B73 x Mo17: '.7003766' χ2 p-value for Mo17 x B73: '2.29e-11' Biased in favor of strain: ''
GRMZM2G444029	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.601573 x 10^-1	614	516	341	690	54.34%	66.93%	1130	1031	RefGen V2	χ2 p-value for B73 x Mo17: '1.46e-18' χ2 p-value for Mo17 x B73: '.8601573' Biased in favor of strain: ''
GRMZM2G443985	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.080442 x 10^-1	195	179	132	166	52.14%	55.70%	374	298	RefGen V2	χ2 p-value for B73 x Mo17: '.4080442' χ2 p-value for Mo17 x B73: '.048888' Biased in favor of strain: ''
GRMZM2G443985	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.407727 x 10^-1	24	6	25	34	80.00%	57.63%	30	59	RefGen V2	χ2 p-value for B73 x Mo17: '.1213403' χ2 p-value for Mo17 x B73: '.1407727' Biased in favor of strain: ''
GRMZM2G443953	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1171	102	808	59	91.99%	6.81%	1273	867	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G443953	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	1112	85	720	204	92.90%	22.08%	1197	924	RefGen V2	χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G443939	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.6162 x 10^-3	30	8	15	2	78.95%	11.76%	38	17	RefGen V2	χ2 p-value for B73 x Mo17: '.0003585' χ2 p-value for Mo17 x B73: '.0016162' Biased in favor of strain: 'B73'
GRMZM2G443939	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	0	1	0		0.00%	0	1	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G443903	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.33272 x 10^-2	605	451	447	376	57.29%	45.69%	1056	823	RefGen V2	χ2 p-value for B73 x Mo17: '2.15e-06' χ2 p-value for Mo17 x B73: '.0133272' Biased in favor of strain: 'B73'
GRMZM2G443903	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.036097 x 10^-1	651	276	234	500	70.23%	68.12%	927	734	RefGen V2	χ2 p-value for B73 x Mo17: '.0215003' χ2 p-value for Mo17 x B73: '.4036097' Biased in favor of strain: ''
GRMZM2G443881	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.616799 x 10^-1	41	37	25	22	52.56%	46.81%	78	47	RefGen V2	χ2 p-value for B73 x Mo17: '.650613' χ2 p-value for Mo17 x B73: '.6616799' Biased in favor of strain: ''
GRMZM2G443881	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.11902 x 10^-1	21	12	16	26	63.64%	61.90%	33	42	RefGen V2	χ2 p-value for B73 x Mo17: '.711902' χ2 p-value for Mo17 x B73: '.5126905' Biased in favor of strain: ''
GRMZM2G443819	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.229856 x 10^-1	54	53	42	51	50.47%	54.84%	107	93	RefGen V2	χ2 p-value for B73 x Mo17: '.9229856' χ2 p-value for Mo17 x B73: '.3506875' Biased in favor of strain: ''
GRMZM2G443819	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	3	0	4	0.00%	100.00%	3	4	RefGen V2	χ2 p-value for B73 x Mo17: '.0143052' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G443814	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.67157 x 10^-2	70	35	42	24	66.67%	36.36%	105	66	RefGen V2	χ2 p-value for B73 x Mo17: '.0006363' χ2 p-value for Mo17 x B73: '.0267157' Biased in favor of strain: 'B73'
GRMZM2G443814	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.64574 x 10^-2	37	6	18	20	86.05%	52.63%	43	38	RefGen V2	χ2 p-value for B73 x Mo17: '.007022' χ2 p-value for Mo17 x B73: '.0664574' Biased in favor of strain: ''
GRMZM2G443785	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.92 x 10^-17	249	59	197	62	80.84%	23.94%	308	259	RefGen V2	χ2 p-value for B73 x Mo17: '2.59e-27' χ2 p-value for Mo17 x B73: '4.92e-17' Biased in favor of strain: 'B73'
GRMZM2G443785	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		4	2	2	4	66.67%	66.67%	6	6	RefGen V2	χ2 p-value for B73 x Mo17: '.9999887' χ2 p-value for Mo17 x B73: '.9999999' Biased in favor of strain: ''
GRMZM2G443776	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.69698 x 10^-1	54	51	69	29	51.43%	29.59%	105	98	RefGen V2	χ2 p-value for B73 x Mo17: '.769698' χ2 p-value for Mo17 x B73: '.0000533' Biased in favor of strain: ''
GRMZM2G443776	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.22624 x 10^-1	43	25	18	35	63.24%	66.04%	68	53	RefGen V2	χ2 p-value for B73 x Mo17: '.5483156' χ2 p-value for Mo17 x B73: '.922624' Biased in favor of strain: ''
GRMZM2G443762	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	9	2	17	0.00%	89.47%	9	19	RefGen V2	χ2 p-value for B73 x Mo17: '.0026998' χ2 p-value for Mo17 x B73: '.0005791' Biased in favor of strain: ''
GRMZM2G443762	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	2.299399 x 10^-1	9	8	2	31	52.94%	93.94%	17	33	RefGen V2	χ2 p-value for B73 x Mo17: '.2299399' χ2 p-value for Mo17 x B73: '.0008891' Biased in favor of strain: ''
GRMZM2G443728	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	8.348273 x 10^-1	22	19	12	11	53.66%	47.83%	41	23	RefGen V2	χ2 p-value for B73 x Mo17: '.6394119' χ2 p-value for Mo17 x B73: '.8348273' Biased in favor of strain: ''
GRMZM2G443728	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.048367 x 10^-1	19	4	20	18	82.61%	47.37%	23	38	RefGen V2	χ2 p-value for B73 x Mo17: '.1048367' χ2 p-value for Mo17 x B73: '.0116169' Biased in favor of strain: ''
GRMZM2G443668	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.707944 x 10^-1	498	344	344	309	59.14%	47.32%	842	653	RefGen V2	χ2 p-value for B73 x Mo17: '1.11e-07' χ2 p-value for Mo17 x B73: '.1707944' Biased in favor of strain: ''
GRMZM2G443668	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.343 x 10^-4	1547	660	697	927	70.10%	57.08%	2207	1624	RefGen V2	χ2 p-value for B73 x Mo17: '.0006343' χ2 p-value for Mo17 x B73: '2.52e-16' Biased in favor of strain: 'B73'
GRMZM2G443655	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.881088 x 10^-1	688	404	385	366	63.00%	48.74%	1092	751	RefGen V2	χ2 p-value for B73 x Mo17: '8.38e-18' χ2 p-value for Mo17 x B73: '.4881088' Biased in favor of strain: ''
GRMZM2G443655	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	0.0	4614	1610	2947	3828	74.13%	56.50%	6224	6775	RefGen V2	χ2 p-value for B73 x Mo17: '8.05e-36' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73'
GRMZM2G443612	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	2	1	9	50.00%	90.00%	4	10	RefGen V2	χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.011412' Biased in favor of strain: ''
GRMZM2G443612	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		2	0	6	0	100.00%	0.00%	2	6	RefGen V2	χ2 p-value for B73 x Mo17: '.3173122' χ2 p-value for Mo17 x B73: '.000532' Biased in favor of strain: ''
GRMZM2G443565	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		0	2	0	2	0.00%	100.00%	2	2	RefGen V2	χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: ''
GRMZM2G443565	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		1	0	0	0	100.00%		1	0	RefGen V2	χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: ''
GRMZM2G443525	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.3545 x 10^-3	324	203	281	210	61.48%	42.77%	527	491	RefGen V2	χ2 p-value for B73 x Mo17: '1.36e-07' χ2 p-value for Mo17 x B73: '.0013545' Biased in favor of strain: 'B73'
GRMZM2G443525	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	9.999998 x 10^-1	17	6	7	14	73.91%	66.67%	23	21	RefGen V2	χ2 p-value for B73 x Mo17: '.4610071' χ2 p-value for Mo17 x B73: '.9999998' Biased in favor of strain: ''
GRMZM2G443509	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.0	484	411	369	369	54.08%	50.00%	895	738	RefGen V2	χ2 p-value for B73 x Mo17: '.0146823' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: ''
GRMZM2G443509	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	7.05 x 10^-5	464	415	303	792	52.79%	72.33%	879	1095	RefGen V2	χ2 p-value for B73 x Mo17: '2.56e-18' χ2 p-value for Mo17 x B73: '.0000705' Biased in favor of strain: 'Mo17'
GRMZM2G443495	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.076829 x 10^-1	246	283	137	202	46.50%	59.59%	529	339	RefGen V2	χ2 p-value for B73 x Mo17: '.1076829' χ2 p-value for Mo17 x B73: '.0004151' Biased in favor of strain: ''
GRMZM2G443495	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	6.021439 x 10^-1	29	17	10	31	63.04%	75.61%	46	41	RefGen V2	χ2 p-value for B73 x Mo17: '.6021439' χ2 p-value for Mo17 x B73: '.2244628' Biased in favor of strain: ''
GRMZM2G443453	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	1.32 x 10^-6	259	160	257	144	61.81%	35.91%	419	401	RefGen V2	χ2 p-value for B73 x Mo17: '1.32e-06' χ2 p-value for Mo17 x B73: '1.67e-08' Biased in favor of strain: 'B73'
GRMZM2G443453	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	3.6611 x 10^-2	63	47	82	89	57.27%	52.05%	110	171	RefGen V2	χ2 p-value for B73 x Mo17: '.036611' χ2 p-value for Mo17 x B73: '.00005' Biased in favor of strain: ''
GRMZM2G443447	embryo	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	not imprinted	4.04 x 10^-10	60	0	42	1	100.00%	2.33%	60	43	RefGen V2	χ2 p-value for B73 x Mo17: '9.49e-15' χ2 p-value for Mo17 x B73: '4.04e-10' Biased in favor of strain: 'B73'
GRMZM2G443447	endosperm	Waters et al. 2011	Z. mays B73	Z. mays Mo17	14 DAP	N/A	N/A	no data		8	0	9	0	100.00%	0.00%	8	9	RefGen V2	χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.0000221' Biased in favor of strain: ''

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