| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G33250 | EIF3K | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.51629 x 10-1 | 40 | 13 | 13 | 30 | 75.47% | 69.77% | 53 | 43 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.662352' Avg. expression score for this sample: '288.107' Avg. expression score in LCM sample: '133.751' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33250 | EIF3K | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 45 | 18 | 50 | 90 | 71.43% | 64.29% | 63 | 140 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.662352' Avg. expression score for this sample: '442.386' Avg. expression score in LCM sample: '133.751' Tissue used: 'full endosperm' |
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| AT4G33250 | EIF3K | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.39581 x 10-1 | 51 | 67 | 5 | 10 | 43.22% | 66.67% | 118 | 15 | TAIR8 |
Avg. embryo expression (dissected): '462.564' Avg. embryo expression (LCM): '629.875' |
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| AT4G33250 | EIF3K | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.26619 x 10-1 | 16 | 5 | 76.19% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G33250 | EIF3K | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.081 x 10-3 | 168 | 41 | 80.38% | 209 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G33250 | EIF3K | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.367 x 10-3 | 188 | 44 | 81.03% | 232 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G33240 | FAB1A | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.60646 x 10-1 | 26 | 3 | 23 | 19 | 89.66% | 45.24% | 29 | 42 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.383579' Avg. expression score for this sample: '51.1846' Avg. expression score in LCM sample: '17.8139' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33240 | FAB1A | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.83123 x 10-1 | 61 | 38 | 43 | 76 | 61.62% | 63.87% | 99 | 119 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.383579' Avg. expression score for this sample: '85.059' Avg. expression score in LCM sample: '17.8139' Tissue used: 'full endosperm' |
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| AT4G33240 | FAB1A | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.19024 x 10-1 | 28 | 25 | 5 | 15 | 52.83% | 75.00% | 53 | 20 | TAIR8 |
Avg. embryo expression (dissected): '83.702' Avg. embryo expression (LCM): '49.3678' |
|||
| AT4G33240 | FAB1A | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 16 | 10 | 61.54% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G33240 | FAB1A | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0202 | 51 | 14 | 78.46% | 65 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G33240 | FAB1A | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.503 x 10-3 | 88 | 25 | 77.88% | 113 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G33230 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.12984' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT4G33230 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.480044' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
|||||||
| AT4G33230 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.158906' Avg. embryo expression (LCM): '0' |
||||||
| AT4G33230 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33230 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33230 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33220 | PME44 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.85714 x 10-1 | 1 | 3 | 0 | 0 | 25.00% | 4 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.428308' Avg. expression score for this sample: '29.492' Avg. expression score in LCM sample: '3.92434' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33220 | PME44 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 4 | 4 | 0 | 1 | 50.00% | 100.00% | 8 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.428308' Avg. expression score for this sample: '31.9532' Avg. expression score in LCM sample: '3.92434' Tissue used: 'full endosperm' |
||||
| AT4G33220 | PME44 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.1768 x 10-1 | 14 | 5 | 6 | 9 | 73.68% | 60.00% | 19 | 15 | TAIR8 |
Avg. embryo expression (dissected): '452.245' Avg. embryo expression (LCM): '488.654' |
|||
| AT4G33220 | PME44 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33220 | PME44 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G33220 | PME44 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 4.079 x 10-3 | 17 | 1 | 94.44% | 18 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G33210 | SLOMO | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.92217 x 10-1 | 20 | 8 | 3 | 23 | 71.43% | 88.46% | 28 | 26 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.438553' Avg. expression score for this sample: '210.817' Avg. expression score in LCM sample: '150.007' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT4G33210 | SLOMO | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 28 | 19 | 10 | 29 | 59.57% | 74.36% | 47 | 39 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.438553' Avg. expression score for this sample: '246.707' Avg. expression score in LCM sample: '150.007' Tissue used: 'full endosperm' |
||||
| AT4G33210 | SLOMO | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.64076 x 10-1 | 13 | 5 | 8 | 8 | 72.22% | 50.00% | 18 | 16 | TAIR8 |
Avg. embryo expression (dissected): '209.879' Avg. embryo expression (LCM): '100.481' |
|||
| AT4G33210 | SLOMO | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.7926 x 10-1 | 11 | 6 | 64.71% | 17 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G33210 | SLOMO | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.21768 x 10-1 | 50 | 12 | 80.65% | 62 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G33210 | SLOMO | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.31945 x 10-1 | 83 | 20 | 80.58% | 103 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G33200 | XI-I | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.62107 x 10-1 | 15 | 6 | 12 | 12 | 71.43% | 50.00% | 21 | 24 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.349741' Avg. expression score for this sample: '30.3679' Avg. expression score in LCM sample: '25.2657' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33200 | XI-I | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.55227 x 10-1 | 57 | 14 | 30 | 71 | 80.28% | 70.30% | 71 | 101 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.349741' Avg. expression score for this sample: '59.6981' Avg. expression score in LCM sample: '25.2657' Tissue used: 'full endosperm' |
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| AT4G33200 | XI-I | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.72023 x 10-1 | 29 | 29 | 11 | 8 | 50.00% | 42.11% | 58 | 19 | TAIR8 |
Avg. embryo expression (dissected): '67.3444' Avg. embryo expression (LCM): '57.895' |
|||
| AT4G33200 | XI-I | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.90812 x 10-1 | 9 | 1 | 90.00% | 10 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G33200 | XI-I | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.597 x 10-3 | 64 | 9 | 87.67% | 73 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G33200 | XI-I | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.8 x 10-11 | 155 | 6 | 96.27% | 161 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G33180 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '8.11402' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33180 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 2 | 0 | 0 | 2 | 100.00% | 100.00% | 2 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '23.1232' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G33180 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.24288' Avg. embryo expression (LCM): '1.01724' |
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| AT4G33180 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33180 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33180 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 1 | 75.00% | 4 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33170 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 0 | 0 | 1 | 100.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '2.34049' Avg. expression score in LCM sample: '3.46871' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33170 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 1 | 0 | 2 | 50.00% | 100.00% | 2 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '4.67055' Avg. expression score in LCM sample: '3.46871' Tissue used: 'full endosperm' |
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| AT4G33170 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 0 | 1 | 0 | 100.00% | 0.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '8.67157' Avg. embryo expression (LCM): '10.9888' |
||||
| AT4G33170 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33170 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33170 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 2 | 0 | 100.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33160 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 4 | 1 | 1 | 1 | 80.00% | 50.00% | 5 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '16.9904' Avg. expression score in LCM sample: '4.68863' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33160 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 7 | 3 | 1 | 1 | 70.00% | 50.00% | 10 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '26.5809' Avg. expression score in LCM sample: '4.68863' Tissue used: 'full endosperm' |
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| AT4G33160 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.08392 x 10-1 | 6 | 0 | 2 | 0 | 100.00% | 0.00% | 6 | 2 | TAIR8 |
Avg. embryo expression (dissected): '56.2408' Avg. embryo expression (LCM): '24.866' |
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| AT4G33160 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33160 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33160 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33150 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.2 x 10-5 | 188 | 43 | 33 | 112 | 81.39% | 77.24% | 231 | 145 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '193.548' Avg. expression score in LCM sample: '69.1243' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33150 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 0.0 | 419 | 41 | 62 | 696 | 91.09% | 91.82% | 460 | 758 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '349.373' Avg. expression score in LCM sample: '69.1243' Tissue used: 'full endosperm' |
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| AT4G33150 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.59645 x 10-1 | 22 | 20 | 3 | 8 | 52.38% | 72.73% | 42 | 11 | TAIR8 |
Avg. embryo expression (dissected): '47.1874' Avg. embryo expression (LCM): '9.19288' |
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| AT4G33150 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.60179 x 10-1 | 116 | 12 | 90.62% | 128 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33150 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.868 x 10-3 | 758 | 59 | 92.78% | 817 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33150 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.6 x 10-17 | 1495 | 53 | 96.58% | 1548 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33145 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.33222 x 10-1 | 7 | 6 | 2 | 3 | 53.85% | 60.00% | 13 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.751317' Avg. expression score for this sample: '27.5632' Avg. expression score in LCM sample: '10.4796' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33145 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 1 | 1 | 100.00% | 50.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.751317' Avg. expression score for this sample: '6.87978' Avg. expression score in LCM sample: '10.4796' Tissue used: 'full endosperm' |
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| AT4G33145 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.6896' Avg. embryo expression (LCM): '5.96532' |
||||||
| AT4G33145 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.66304 x 10-1 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33145 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33145 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33140 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.47687 x 10-1 | 23 | 6 | 2 | 15 | 79.31% | 88.24% | 29 | 17 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.019438' Avg. expression score for this sample: '145.964' Avg. expression score in LCM sample: '111.572' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33140 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.00327 x 10-1 | 41 | 21 | 16 | 75 | 66.13% | 82.42% | 62 | 91 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.019438' Avg. expression score for this sample: '298.276' Avg. expression score in LCM sample: '111.572' Tissue used: 'full endosperm' |
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| AT4G33140 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.51186 x 10-1 | 10 | 7 | 1 | 2 | 58.82% | 66.67% | 17 | 3 | TAIR8 |
Avg. embryo expression (dissected): '130.67' Avg. embryo expression (LCM): '138.433' |
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| AT4G33140 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.6116 x 10-2 | 8 | 7 | 53.33% | 15 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33140 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 8.58295 x 10-1 | 46 | 12 | 79.31% | 58 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33140 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.75544 x 10-1 | 50 | 9 | 84.75% | 59 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33130 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '50.4554' Avg. expression score in LCM sample: '22.1792' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33130 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '32.5997' Avg. expression score in LCM sample: '22.1792' Tissue used: 'full endosperm' |
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| AT4G33130 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '53.1629' Avg. embryo expression (LCM): '71.0815' |
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| AT4G33130 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33130 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33130 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.58705' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33120 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '1.19217' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT4G33120 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '2.02611' Avg. embryo expression (LCM): '1.92146' |
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| AT4G33120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33120 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33120 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 1 | 3 | 2 | 6 | 25.00% | 75.00% | 4 | 8 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.836889' Avg. expression score for this sample: '15.8728' Avg. expression score in LCM sample: '3.35112' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33110 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 8 | 6 | 8 | 18 | 57.14% | 69.23% | 14 | 26 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.836889' Avg. expression score for this sample: '29.3036' Avg. expression score in LCM sample: '3.35112' Tissue used: 'full endosperm' |
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| AT4G33110 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.34827 x 10-1 | 14 | 23 | 2 | 7 | 37.84% | 77.78% | 37 | 9 | TAIR8 |
Avg. embryo expression (dissected): '101.173' Avg. embryo expression (LCM): '43.8671' |
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| AT4G33110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G33110 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.91389 x 10-1 | 36 | 11 | 76.60% | 47 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33110 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.84117 x 10-1 | 66 | 30 | 68.75% | 96 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.47153 x 10-1 | 14 | 4 | 2 | 8 | 77.78% | 80.00% | 18 | 10 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.202148' Avg. expression score for this sample: '40.1717' Avg. expression score in LCM sample: '17.4023' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33100 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.1622 x 10-1 | 36 | 5 | 19 | 30 | 87.80% | 61.22% | 41 | 49 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.202148' Avg. expression score for this sample: '58.4907' Avg. expression score in LCM sample: '17.4023' Tissue used: 'full endosperm' |
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| AT4G33100 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 7 | 9 | 2 | 2 | 43.75% | 50.00% | 16 | 4 | TAIR8 |
Avg. embryo expression (dissected): '45.144' Avg. embryo expression (LCM): '27.6289' |
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| AT4G33100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 6.47592 x 10-1 | 4 | 2 | 66.67% | 6 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33100 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.69363 x 10-1 | 23 | 5 | 82.14% | 28 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33100 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.09782 x 10-1 | 38 | 8 | 82.61% | 46 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G33090 | APM1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '343.37' Avg. expression score in LCM sample: '214.707' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G33090 | APM1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '528.49' Avg. expression score in LCM sample: '214.707' Tissue used: 'full endosperm' |
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| AT4G33090 | APM1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '323.958' Avg. embryo expression (LCM): '252.151' |
|||||
| AT4G33090 | APM1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |