Displaying data sets 43501 - 43600 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G33690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '132.594'
Avg. expression score in LCM sample: '61.937'
Tissue used: 'pure endosperm, no chalazal'
AT4G33690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '232.417'
Avg. expression score in LCM sample: '61.937'
Tissue used: 'full endosperm'
AT4G33690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '91.2741'
Avg. embryo expression (LCM): '73.5681'
AT4G33690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33680 AGD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '217.994'
Avg. expression score in LCM sample: '127.049'
Tissue used: 'pure endosperm, no chalazal'
AT4G33680 AGD2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '230.726'
Avg. expression score in LCM sample: '127.049'
Tissue used: 'full endosperm'
AT4G33680 AGD2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '696.53'
Avg. embryo expression (LCM): '579.993'
AT4G33680 AGD2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33680 AGD2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33680 AGD2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '456.717'
Avg. expression score in LCM sample: '211.356'
Tissue used: 'pure endosperm, no chalazal'
AT4G33670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '410.091'
Avg. expression score in LCM sample: '211.356'
Tissue used: 'full endosperm'
AT4G33670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '590.824'
Avg. embryo expression (LCM): '269.331'
AT4G33670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33666 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '43.0679'
Avg. expression score in LCM sample: '6.04084'
Tissue used: 'pure endosperm, no chalazal'
AT4G33666 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '55.9194'
Avg. expression score in LCM sample: '6.04084'
Tissue used: 'full endosperm'
AT4G33666 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '19.5659'
Avg. embryo expression (LCM): '5.16158'
AT4G33666 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33666 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33666 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '388.36'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G33660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '894.049'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G33660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '112.79'
Avg. embryo expression (LCM): '20.8598'
AT4G33660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33650 DRP3A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '27.3135'
Avg. expression score in LCM sample: '22.6054'
Tissue used: 'pure endosperm, no chalazal'
AT4G33650 DRP3A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '53.8532'
Avg. expression score in LCM sample: '22.6054'
Tissue used: 'full endosperm'
AT4G33650 DRP3A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '25.0118'
Avg. embryo expression (LCM): '31.3336'
AT4G33650 DRP3A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33650 DRP3A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33650 DRP3A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '77.8669'
Avg. expression score in LCM sample: '22.7671'
Tissue used: 'pure endosperm, no chalazal'
AT4G33640 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '130.438'
Avg. expression score in LCM sample: '22.7671'
Tissue used: 'full endosperm'
AT4G33640 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '97.4028'
Avg. embryo expression (LCM): '58.3597'
AT4G33640 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33640 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33640 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33630 EX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '99.7953'
Avg. expression score in LCM sample: '87.4526'
Tissue used: 'pure endosperm, no chalazal'
AT4G33630 EX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '166.873'
Avg. expression score in LCM sample: '87.4526'
Tissue used: 'full endosperm'
AT4G33630 EX1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '99.852'
Avg. embryo expression (LCM): '108.33'
AT4G33630 EX1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33630 EX1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33630 EX1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33625 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '100.151'
Avg. expression score in LCM sample: '54.882'
Tissue used: 'pure endosperm, no chalazal'
AT4G33625 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '94.1923'
Avg. expression score in LCM sample: '54.882'
Tissue used: 'full endosperm'
AT4G33625 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '83.2379'
Avg. embryo expression (LCM): '56.0238'
AT4G33625 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33625 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33625 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '10.743'
Avg. expression score in LCM sample: '6.92272'
Tissue used: 'pure endosperm, no chalazal'
AT4G33620 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '18.628'
Avg. expression score in LCM sample: '6.92272'
Tissue used: 'full endosperm'
AT4G33620 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '20.7769'
Avg. embryo expression (LCM): '16.6778'
AT4G33620 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33620 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33620 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '15.4799'
Avg. expression score in LCM sample: '22.091'
Tissue used: 'pure endosperm, no chalazal'
AT4G33610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '130.464'
Avg. expression score in LCM sample: '22.091'
Tissue used: 'full endosperm'
AT4G33610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.60344'
Avg. embryo expression (LCM): '0'
AT4G33610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.29666 x 10-1 3863 2050 2042 4055 65.33% 66.51% 5913 6097 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.487997'
Avg. expression score for this sample: '5365.16'
Avg. expression score in LCM sample: '2701.83'
Tissue used: 'pure endosperm, no chalazal'
AT4G33600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.57498 x 10-1 1179 517 1051 2039 69.52% 65.99% 1696 3090 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.487997'
Avg. expression score for this sample: '2368.15'
Avg. expression score in LCM sample: '2701.83'
Tissue used: 'full endosperm'
AT4G33600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.3 x 10-6 180 124 49 132 59.21% 72.93% 304 181 TAIR8 Avg. embryo expression (dissected): '391.338'
Avg. embryo expression (LCM): '38.7809'
AT4G33600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.3993 x 10-2 276 170 61.88% 446 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.80848 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.38766 x 10-1 56 25 69.14% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.83712 x 10-1 0 27 0 31 0.00% 100.00% 27 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.783072'
Avg. expression score for this sample: '179.966'
Avg. expression score in LCM sample: '143.51'
Tissue used: 'pure endosperm, no chalazal'
AT4G33590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.40952 x 10-1 1 15 0 42 6.25% 100.00% 16 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.783072'
Avg. expression score for this sample: '110.504'
Avg. expression score in LCM sample: '143.51'
Tissue used: 'full endosperm'
AT4G33590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 0 4 0 0 0.00% 4 0 TAIR8 Avg. embryo expression (dissected): '13.1909'
Avg. embryo expression (LCM): '2.47404'
AT4G33590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.51193 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33585 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 1 1 100.00% 50.00% 2 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.099812'
Avg. expression score for this sample: '4.33313'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G33585 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.278 x 10-2 11 6 13 3 64.71% 18.75% 17 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.099812'
Avg. expression score for this sample: '15.0199'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G33585 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 5 0 1 28.57% 100.00% 7 1 TAIR8 Avg. embryo expression (dissected): '5.838'
Avg. embryo expression (LCM): '9.7329'
AT4G33585 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33585 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.1055 x 10-2 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33585 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.30769 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33580 BCA5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.14685 x 10-1 0 2 4 2 0.00% 33.33% 2 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '78.704'
Avg. expression score in LCM sample: '37.0387'
Tissue used: 'pure endosperm, no chalazal'
AT4G33580 BCA5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.84541 x 10-1 6 1 1 6 85.71% 85.71% 7 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '64.2072'
Avg. expression score in LCM sample: '37.0387'
Tissue used: 'full endosperm'
AT4G33580 BCA5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.95098 x 10-1 6 3 2 2 66.67% 50.00% 9 4 TAIR8 Avg. embryo expression (dissected): '111.652'
Avg. embryo expression (LCM): '205.747'
AT4G33580 BCA5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.36232 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33580 BCA5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.91304 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33580 BCA5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.26957 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33565 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 2 100.00% 66.67% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-20'
Avg. expression score for this sample: '3.38861'
Avg. expression score in LCM sample: '4.05662'
Tissue used: 'pure endosperm, no chalazal'
AT4G33565 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.7 x 10-21 58 2 4 180 96.67% 97.83% 60 184 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-20'
Avg. expression score for this sample: '105.121'
Avg. expression score in LCM sample: '4.05662'
Tissue used: 'full endosperm'
AT4G33565 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.1133'
Avg. embryo expression (LCM): '0'
AT4G33565 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.4611 x 10-2 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33565 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.6349 x 10-2 157 0 100.00% 157 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33565 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.191 x 10-3 396 0 100.00% 396 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G33560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.3086 x 10-2 867 759 383 1662 53.32% 81.27% 1626 2045 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011377'
Avg. expression score for this sample: '2489.73'
Avg. expression score in LCM sample: '280.23'
Tissue used: 'pure endosperm, no chalazal'
AT4G33560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.6 x 10-9 1238 1100 160 614 52.95% 79.33% 2338 774 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011377'
Avg. expression score for this sample: '1507.48'
Avg. expression score in LCM sample: '280.23'
Tissue used: 'full endosperm'
AT4G33560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.07101 x 10-1 110 179 53 90 38.06% 62.94% 289 143 TAIR8 Avg. embryo expression (dissected): '449.9'
Avg. embryo expression (LCM): '78.1897'
AT4G33560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.3 x 10-7 232 64 78.38% 296 TAIR8 Mutant effect: 'N/A (not a MEG)'