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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G34695 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G34695 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34695 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34695 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.346935'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G34690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 3.46935 x 10-1 3 6 0 0 33.33% 9 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.346935'
Avg. expression score for this sample: '4.07233'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G34690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '4.20079'
Avg. embryo expression (LCM): '0'
AT4G34690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.525 x 10-3 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34680 GATA3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.66455 x 10-1 25 20 8 25 55.56% 75.76% 45 33 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.842103'
Avg. expression score for this sample: '55.8312'
Avg. expression score in LCM sample: '21.7382'
Tissue used: 'pure endosperm, no chalazal'
AT4G34680 GATA3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 44 36 14 52 55.00% 78.79% 80 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.842103'
Avg. expression score for this sample: '89.082'
Avg. expression score in LCM sample: '21.7382'
Tissue used: 'full endosperm'
AT4G34680 GATA3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 9 4 7 43.75% 63.64% 16 11 TAIR8 Avg. embryo expression (dissected): '32.8824'
Avg. embryo expression (LCM): '27.2521'
AT4G34680 GATA3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.52356 x 10-1 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34680 GATA3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.45959 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34680 GATA3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4157 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 101 49 33 66 67.33% 66.67% 150 99 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.517975'
Avg. expression score for this sample: '921.451'
Avg. expression score in LCM sample: '432.133'
Tissue used: 'pure endosperm, no chalazal'
AT4G34670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.84039 x 10-1 226 98 113 234 69.75% 67.44% 324 347 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.517975'
Avg. expression score for this sample: '832.48'
Avg. expression score in LCM sample: '432.133'
Tissue used: 'full endosperm'
AT4G34670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.34289 x 10-1 195 175 36 28 52.70% 43.75% 370 64 TAIR8 Avg. embryo expression (dissected): '2194.47'
Avg. embryo expression (LCM): '2745.15'
AT4G34670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.09145 x 10-1 57 20 74.03% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.647 x 10-2 225 73 75.50% 298 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.3 x 10-12 272 40 87.18% 312 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.090226'
Avg. expression score for this sample: '238.616'
Avg. expression score in LCM sample: '116.407'
Tissue used: 'pure endosperm, no chalazal'
AT4G34660 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.1 6 0 0 2 100.00% 100.00% 6 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.090226'
Avg. expression score for this sample: '286.123'
Avg. expression score in LCM sample: '116.407'
Tissue used: 'full endosperm'
AT4G34660 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '265.895'
Avg. embryo expression (LCM): '228.541'
AT4G34660 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34660 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.05217 x 10-1 10 4 71.43% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34660 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.57937 x 10-1 14 3 82.35% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34650 SQS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G34650 SQS2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.116466'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G34650 SQS2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.202314'
Avg. embryo expression (LCM): '0'
AT4G34650 SQS2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34650 SQS2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34650 SQS2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34640 SQS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 6 4 12 53.85% 75.00% 13 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019933'
Avg. expression score for this sample: '176.951'
Avg. expression score in LCM sample: '117.716'
Tissue used: 'pure endosperm, no chalazal'
AT4G34640 SQS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.875 x 10-3 25 2 5 35 92.59% 87.50% 27 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.019933'
Avg. expression score for this sample: '172.39'
Avg. expression score in LCM sample: '117.716'
Tissue used: 'full endosperm'
AT4G34640 SQS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.64076 x 10-1 11 17 4 2 39.29% 33.33% 28 6 TAIR8 Avg. embryo expression (dissected): '322.68'
Avg. embryo expression (LCM): '239.63'
AT4G34640 SQS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34640 SQS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.14999 x 10-1 46 14 76.67% 60 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34640 SQS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.38378 x 10-1 47 4 92.16% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.6492 x 10-2 193 42 87 139 82.13% 61.50% 235 226 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.242755'
Avg. expression score for this sample: '2161.01'
Avg. expression score in LCM sample: '457.12'
Tissue used: 'pure endosperm, no chalazal'
AT4G34630 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.29335 x 10-1 76 33 64 111 69.72% 63.43% 109 175 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.242755'
Avg. expression score for this sample: '1208.49'
Avg. expression score in LCM sample: '457.12'
Tissue used: 'full endosperm'
AT4G34630 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.41835 x 10-1 174 122 61 53 58.78% 46.49% 296 114 TAIR8 Avg. embryo expression (dissected): '3146.71'
Avg. embryo expression (LCM): '718.451'
AT4G34630 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.0552 x 10-2 40 7 85.11% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34630 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.24897 x 10-1 113 48 70.19% 161 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34630 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.3 x 10-6 177 32 84.69% 209 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34620 SSR16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1018.55'
Avg. expression score in LCM sample: '254.436'
Tissue used: 'pure endosperm, no chalazal'
AT4G34620 SSR16 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2411.12'
Avg. expression score in LCM sample: '254.436'
Tissue used: 'full endosperm'
AT4G34620 SSR16 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1941.48'
Avg. embryo expression (LCM): '2422.42'
AT4G34620 SSR16 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34620 SSR16 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34620 SSR16 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34610 BLH6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003898'
Avg. expression score for this sample: '28.5164'
Avg. expression score in LCM sample: '5.55581'
Tissue used: 'pure endosperm, no chalazal'
AT4G34610 BLH6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.901 x 10-3 9 0 0 13 100.00% 100.00% 9 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003898'
Avg. expression score for this sample: '42.282'
Avg. expression score in LCM sample: '5.55581'
Tissue used: 'full endosperm'
AT4G34610 BLH6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.0206 x 10-2 5 1 0 7 83.33% 100.00% 6 7 TAIR8 Avg. embryo expression (dissected): '136.808'
Avg. embryo expression (LCM): '107.326'
AT4G34610 BLH6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34610 BLH6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34610 BLH6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G34600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.54545 x 10-1 1 0 0 5 100.00% 100.00% 1 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.454545'
Avg. expression score for this sample: '12.0581'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G34600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G34600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34590 GBF6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G34590 GBF6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G34590 GBF6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G34590 GBF6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34590 GBF6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34590 GBF6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34588 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 0 1 33.33% 100.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.415093'
Avg. expression score for this sample: '602.043'
Avg. expression score in LCM sample: '198.628'
Tissue used: 'pure endosperm, no chalazal'
AT4G34588 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.19341 x 10-1 29 6 16 34 82.86% 68.00% 35 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.415093'
Avg. expression score for this sample: '745.317'
Avg. expression score in LCM sample: '198.628'
Tissue used: 'full endosperm'
AT4G34588 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 5.45455 x 10-1 5 1 0 0 83.33% 6 0 TAIR8 Avg. embryo expression (dissected): '369.939'
Avg. embryo expression (LCM): '219.248'
AT4G34588 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34588 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 40 14 74.07% 54 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34588 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.226 x 10-3 45 4 91.84% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34580 COW1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G34580 COW1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G34580 COW1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.421519'
Avg. embryo expression (LCM): '0'
AT4G34580 COW1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34580 COW1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34580 COW1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34570 THY-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '11.0136'
Avg. expression score in LCM sample: '3.77736'
Tissue used: 'pure endosperm, no chalazal'
AT4G34570 THY-2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '12.599'
Avg. expression score in LCM sample: '3.77736'
Tissue used: 'full endosperm'
AT4G34570 THY-2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '33.2216'
Avg. embryo expression (LCM): '40.0367'
AT4G34570 THY-2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34570 THY-2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34570 THY-2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G34560 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.15264'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G34560 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.259447'
Avg. embryo expression (LCM): '0'
AT4G34560 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34560 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34560 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34555 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '129.094'
Avg. expression score in LCM sample: '38.7437'
Tissue used: 'pure endosperm, no chalazal'
AT4G34555 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '115.381'
Avg. expression score in LCM sample: '38.7437'
Tissue used: 'full endosperm'
AT4G34555 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '229.777'
Avg. embryo expression (LCM): '364.136'
AT4G34555 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34555 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G34555 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'