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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G35490 MRPL11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.78716 x 10-1 5 7 1 17 41.67% 94.44% 12 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '86.2598'
Avg. expression score in LCM sample: '19.0338'
Tissue used: 'pure endosperm, no chalazal'
AT4G35490 MRPL11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.90447 x 10-1 5 11 10 29 31.25% 74.36% 16 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '50.6442'
Avg. expression score in LCM sample: '19.0338'
Tissue used: 'full endosperm'
AT4G35490 MRPL11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.77087 x 10-1 12 19 2 2 38.71% 50.00% 31 4 TAIR8 Avg. embryo expression (dissected): '154.313'
Avg. embryo expression (LCM): '209.854'
AT4G35490 MRPL11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 9 4 69.23% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35490 MRPL11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.86968 x 10-1 27 7 79.41% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35490 MRPL11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.20158 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35480 RHA3B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.04245 x 10-1 39 15 29 22 72.22% 43.14% 54 51 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004733'
Avg. expression score for this sample: '102.944'
Avg. expression score in LCM sample: '42.0948'
Tissue used: 'pure endosperm, no chalazal'
AT4G35480 RHA3B endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.66 x 10-3 51 48 31 34 51.52% 52.31% 99 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004733'
Avg. expression score for this sample: '105.788'
Avg. expression score in LCM sample: '42.0948'
Tissue used: 'full endosperm'
AT4G35480 RHA3B embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.69719 x 10-1 26 18 35 16 59.09% 31.37% 44 51 TAIR8 Avg. embryo expression (dissected): '182.185'
Avg. embryo expression (LCM): '28.7717'
AT4G35480 RHA3B endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.47883 x 10-1 23 11 67.65% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35480 RHA3B endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.1512 2 6 25.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35480 RHA3B endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.07 x 10-4 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35470 PIRL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '20.2738'
Avg. expression score in LCM sample: '20.1949'
Tissue used: 'pure endosperm, no chalazal'
AT4G35470 PIRL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.4099'
Avg. expression score in LCM sample: '20.1949'
Tissue used: 'full endosperm'
AT4G35470 PIRL4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '19.6547'
Avg. embryo expression (LCM): '17.7704'
AT4G35470 PIRL4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35470 PIRL4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35470 PIRL4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35460 NTRB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.16173 x 10-1 76 33 33 63 69.72% 65.62% 109 96 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.147315'
Avg. expression score for this sample: '138.591'
Avg. expression score in LCM sample: '103.018'
Tissue used: 'pure endosperm, no chalazal'
AT4G35460 NTRB endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.10177 x 10-1 131 34 104 217 79.39% 67.60% 165 321 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.147315'
Avg. expression score for this sample: '166.888'
Avg. expression score in LCM sample: '103.018'
Tissue used: 'full endosperm'
AT4G35460 NTRB embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.02938 x 10-1 159 175 25 11 47.60% 30.56% 334 36 TAIR8 Avg. embryo expression (dissected): '322.854'
Avg. embryo expression (LCM): '293.431'
AT4G35460 NTRB endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.73176 x 10-1 49 17 74.24% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35460 NTRB endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7248 x 10-2 291 85 77.39% 376 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35460 NTRB endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-8 232 33 87.55% 265 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35450 AKR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.53114 x 10-1 21 12 13 15 63.64% 53.57% 33 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.482146'
Avg. expression score for this sample: '171.328'
Avg. expression score in LCM sample: '96.1685'
Tissue used: 'pure endosperm, no chalazal'
AT4G35450 AKR2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.80789 x 10-1 28 11 24 35 71.79% 59.32% 39 59 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.482146'
Avg. expression score for this sample: '187.496'
Avg. expression score in LCM sample: '96.1685'
Tissue used: 'full endosperm'
AT4G35450 AKR2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.26173 x 10-1 24 25 17 10 48.98% 37.04% 49 27 TAIR8 Avg. embryo expression (dissected): '302.748'
Avg. embryo expression (LCM): '237.395'
AT4G35450 AKR2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.9743 x 10-2 12 2 85.71% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35450 AKR2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.69274 x 10-1 9 4 69.23% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35450 AKR2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-4 37 3 92.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35440 CLC-E endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 24 11 6 12 68.57% 66.67% 35 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.885816'
Avg. expression score for this sample: '60.8874'
Avg. expression score in LCM sample: '27.147'
Tissue used: 'pure endosperm, no chalazal'
AT4G35440 CLC-E endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 26 6 12 13 81.25% 52.00% 32 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.885816'
Avg. expression score for this sample: '46.3043'
Avg. expression score in LCM sample: '27.147'
Tissue used: 'full endosperm'
AT4G35440 CLC-E embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 14 16 7 7 46.67% 50.00% 30 14 TAIR8 Avg. embryo expression (dissected): '96.8386'
Avg. embryo expression (LCM): '37.4622'
AT4G35440 CLC-E endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.2447 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35440 CLC-E endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.29389 x 10-1 42 17 71.19% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35440 CLC-E endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.355 x 10-2 32 5 86.49% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '36.4528'
Avg. expression score in LCM sample: '10.2004'
Tissue used: 'pure endosperm, no chalazal'
AT4G35430 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.8707'
Avg. expression score in LCM sample: '10.2004'
Tissue used: 'full endosperm'
AT4G35430 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '62.5178'
Avg. embryo expression (LCM): '26.1595'
AT4G35430 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35430 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35430 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35420 DRL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '28.3025'
Avg. expression score in LCM sample: '25.7654'
Tissue used: 'pure endosperm, no chalazal'
AT4G35420 DRL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '31.7153'
Avg. expression score in LCM sample: '25.7654'
Tissue used: 'full endosperm'
AT4G35420 DRL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '43.791'
Avg. embryo expression (LCM): '33.0165'
AT4G35420 DRL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35420 DRL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35420 DRL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.1768 x 10-1 5 10 7 12 33.33% 63.16% 15 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.698502'
Avg. expression score for this sample: '18.7812'
Avg. expression score in LCM sample: '6.68755'
Tissue used: 'pure endosperm, no chalazal'
AT4G35410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.79016 x 10-1 21 16 15 46 56.76% 75.41% 37 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.698502'
Avg. expression score for this sample: '30.3186'
Avg. expression score in LCM sample: '6.68755'
Tissue used: 'full endosperm'
AT4G35410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.45232 x 10-1 9 24 1 4 27.27% 80.00% 33 5 TAIR8 Avg. embryo expression (dissected): '26.203'
Avg. embryo expression (LCM): '21.4249'
AT4G35410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.0775 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.2 x 10-5 71 9 88.75% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.401 x 10-3 36 4 90.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35390 AGF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.81659 x 10-1 8 2 1 4 80.00% 80.00% 10 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.97529'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G35390 AGF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 3 3 5 62.50% 62.50% 8 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.9291'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G35390 AGF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.00544 x 10-1 46 45 17 20 50.55% 54.05% 91 37 TAIR8 Avg. embryo expression (dissected): '82.7258'
Avg. embryo expression (LCM): '60.683'
AT4G35390 AGF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35390 AGF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35390 AGF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.741878'
Avg. expression score in LCM sample: '.27926'
Tissue used: 'pure endosperm, no chalazal'
AT4G35380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.00964'
Avg. expression score in LCM sample: '.27926'
Tissue used: 'full endosperm'
AT4G35380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.142831'
Avg. embryo expression (LCM): '0'
AT4G35380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G35370 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.55564'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G35370 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G35370 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35370 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.4 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35370 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.25 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 4 0 7 20.00% 100.00% 5 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.644334'
Avg. expression score for this sample: '15.296'
Avg. expression score in LCM sample: '10.7442'
Tissue used: 'pure endosperm, no chalazal'
AT4G35360 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.84973 x 10-1 10 4 4 14 71.43% 77.78% 14 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.644334'
Avg. expression score for this sample: '60.1435'
Avg. expression score in LCM sample: '10.7442'
Tissue used: 'full endosperm'
AT4G35360 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 3 0 0 25.00% 4 0 TAIR8 Avg. embryo expression (dissected): '24.3461'
Avg. embryo expression (LCM): '18.3606'
AT4G35360 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.15449 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35360 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.40222 x 10-1 58 12 82.86% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35360 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.42792 x 10-1 29 7 80.56% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35350 XCP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.1927 x 10-1 1 0 5 2 100.00% 28.57% 1 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.637186'
Avg. expression score for this sample: '2.91951'
Avg. expression score in LCM sample: '1.17583'
Tissue used: 'pure endosperm, no chalazal'
AT4G35350 XCP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.637186'
Avg. expression score for this sample: '2.65031'
Avg. expression score in LCM sample: '1.17583'
Tissue used: 'full endosperm'
AT4G35350 XCP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '1.99708'
Avg. embryo expression (LCM): '2.02193'
AT4G35350 XCP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35350 XCP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35350 XCP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3956 x 10-2 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35335 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '26.2347'
Avg. expression score in LCM sample: '6.27601'
Tissue used: 'pure endosperm, no chalazal'
AT4G35335 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '37.3952'
Avg. expression score in LCM sample: '6.27601'
Tissue used: 'full endosperm'
AT4G35335 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '27.6137'
Avg. embryo expression (LCM): '13.4126'
AT4G35335 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35335 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35335 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '48.0038'
Avg. expression score in LCM sample: '11.2145'
Tissue used: 'pure endosperm, no chalazal'
AT4G35320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '102.223'
Avg. expression score in LCM sample: '11.2145'
Tissue used: 'full endosperm'
AT4G35320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '11.0148'
Avg. embryo expression (LCM): '11.1897'
AT4G35320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35310 CPK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.78302 x 10-1 197 29 101 55 87.17% 35.26% 226 156 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.581182'
Avg. expression score for this sample: '236.489'
Avg. expression score in LCM sample: '149.919'
Tissue used: 'pure endosperm, no chalazal'
AT4G35310 CPK5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.88443 x 10-1 330 65 150 148 83.54% 49.66% 395 298 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.581182'
Avg. expression score for this sample: '302.007'
Avg. expression score in LCM sample: '149.919'
Tissue used: 'full endosperm'
AT4G35310 CPK5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.5 x 10-8 229 57 41 14 80.07% 25.45% 286 55 TAIR8 Avg. embryo expression (dissected): '355.791'
Avg. embryo expression (LCM): '265.099'
AT4G35310 CPK5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3 x 10-4 29 37 43.94% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'