Displaying data sets 42001 - 42100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G35905 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '21.6205'
Avg. expression score in LCM sample: '28.1612'
Tissue used: 'pure endosperm, no chalazal'
AT4G35905 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '23.3573'
Avg. expression score in LCM sample: '28.1612'
Tissue used: 'full endosperm'
AT4G35905 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '18.3381'
Avg. embryo expression (LCM): '24.0622'
AT4G35905 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35905 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35905 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35900 FD endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 2 0.00% 66.67% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '9.58079'
Avg. expression score in LCM sample: '1.08765'
Tissue used: 'pure endosperm, no chalazal'
AT4G35900 FD endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 3 1 2 75.00% 66.67% 12 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '13.0518'
Avg. expression score in LCM sample: '1.08765'
Tissue used: 'full endosperm'
AT4G35900 FD embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 4 1 1 33.33% 50.00% 6 2 TAIR8 Avg. embryo expression (dissected): '18.5414'
Avg. embryo expression (LCM): '7.47235'
AT4G35900 FD endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35900 FD endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35900 FD endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35890 LARP1c endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.02211 x 10-1 11 1 2 10 91.67% 83.33% 12 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.037447'
Avg. expression score for this sample: '177.676'
Avg. expression score in LCM sample: '186.708'
Tissue used: 'pure endosperm, no chalazal'
AT4G35890 LARP1c endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.15765 x 10-1 28 5 8 23 84.85% 74.19% 33 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.037447'
Avg. expression score for this sample: '217.386'
Avg. expression score in LCM sample: '186.708'
Tissue used: 'full endosperm'
AT4G35890 LARP1c embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 6 5 4 4 54.55% 50.00% 11 8 TAIR8 Avg. embryo expression (dissected): '161.113'
Avg. embryo expression (LCM): '172.731'
AT4G35890 LARP1c endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.41374 x 10-1 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35890 LARP1c endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0683 x 10-2 72 38 65.45% 110 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35890 LARP1c endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.47322 x 10-1 60 20 75.00% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.42431 x 10-1 45 9 12 19 83.33% 61.29% 54 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043029'
Avg. expression score for this sample: '151.866'
Avg. expression score in LCM sample: '85.6741'
Tissue used: 'pure endosperm, no chalazal'
AT4G35880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.01126 x 10-1 62 18 26 71 77.50% 73.20% 80 97 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.043029'
Avg. expression score for this sample: '221.398'
Avg. expression score in LCM sample: '85.6741'
Tissue used: 'full endosperm'
AT4G35880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 21 16 10 7 56.76% 41.18% 37 17 TAIR8 Avg. embryo expression (dissected): '162.691'
Avg. embryo expression (LCM): '99.6272'
AT4G35880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.8041 x 10-1 27 4 87.10% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.8 x 10-7 104 4 96.30% 108 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.4 x 10-16 257 5 98.09% 262 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.73375 x 10-1 53 20 14 31 72.60% 68.89% 73 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000021'
Avg. expression score for this sample: '73.6543'
Avg. expression score in LCM sample: '75.7971'
Tissue used: 'pure endosperm, no chalazal'
AT4G35870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.7 x 10-6 157 19 42 122 89.20% 74.39% 176 164 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000021'
Avg. expression score for this sample: '146.446'
Avg. expression score in LCM sample: '75.7971'
Tissue used: 'full endosperm'
AT4G35870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.26421 x 10-1 30 19 16 15 61.22% 48.39% 49 31 TAIR8 Avg. embryo expression (dissected): '80.5762'
Avg. embryo expression (LCM): '47.1826'
AT4G35870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.42684 x 10-1 22 3 88.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.08 x 10-4 124 11 91.85% 135 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.5 x 10-19 323 4 98.78% 327 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35860 GB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '180.542'
Avg. expression score in LCM sample: '72.4313'
Tissue used: 'pure endosperm, no chalazal'
AT4G35860 GB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '255.036'
Avg. expression score in LCM sample: '72.4313'
Tissue used: 'full endosperm'
AT4G35860 GB2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '96.3483'
Avg. embryo expression (LCM): '58.523'
AT4G35860 GB2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35860 GB2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35860 GB2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 3 0 2 0.00% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.814687'
Avg. expression score for this sample: '47.2722'
Avg. expression score in LCM sample: '17.9315'
Tissue used: 'pure endosperm, no chalazal'
AT4G35850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.48473 x 10-1 13 7 2 16 65.00% 88.89% 20 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.814687'
Avg. expression score for this sample: '58.5474'
Avg. expression score in LCM sample: '17.9315'
Tissue used: 'full endosperm'
AT4G35850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.96004 x 10-1 5 10 2 0 33.33% 0.00% 15 2 TAIR8 Avg. embryo expression (dissected): '220.559'
Avg. embryo expression (LCM): '252.49'
AT4G35850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.1198 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.38584 x 10-1 27 14 65.85% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 24 10 70.59% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.1073 x 10-2 9 0 0 6 100.00% 100.00% 9 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.8e-10'
Avg. expression score for this sample: '41.1761'
Avg. expression score in LCM sample: '11.0969'
Tissue used: 'pure endosperm, no chalazal'
AT4G35840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.5 x 10-8 36 0 3 55 100.00% 94.83% 36 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.8e-10'
Avg. expression score for this sample: '114.646'
Avg. expression score in LCM sample: '11.0969'
Tissue used: 'full endosperm'
AT4G35840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.26195 x 10-1 6 2 1 4 75.00% 80.00% 8 5 TAIR8 Avg. embryo expression (dissected): '51.7324'
Avg. embryo expression (LCM): '20.3198'
AT4G35840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 13 0 100.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.93413 x 10-1 152 3 98.06% 155 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.7787 x 10-1 276 14 95.17% 290 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35837 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G35837 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G35837 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G35837 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35837 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35837 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35830 ACO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.36324 x 10-1 225 49 84 107 82.12% 56.02% 274 191 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000165'
Avg. expression score for this sample: '553.503'
Avg. expression score in LCM sample: '249.879'
Tissue used: 'pure endosperm, no chalazal'
AT4G35830 ACO1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.69 x 10-4 351 64 115 195 84.58% 62.90% 415 310 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000165'
Avg. expression score for this sample: '843.346'
Avg. expression score in LCM sample: '249.879'
Tissue used: 'full endosperm'
AT4G35830 ACO1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.312 x 10-3 227 111 58 38 67.16% 39.58% 338 96 TAIR8 Avg. embryo expression (dissected): '1011.68'
Avg. embryo expression (LCM): '517.438'
AT4G35830 ACO1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.5 x 10-5 111 77 59.04% 188 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35830 ACO1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.541 x 10-3 360 88 80.36% 448 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35830 ACO1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1226 50 96.08% 1276 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G35820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G35820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G35820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.49934'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G35810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.385977'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G35810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G35810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35800 NRPB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.8838 x 10-2 1696 846 940 2160 66.72% 69.68% 2542 3100 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.6e-11'
Avg. expression score for this sample: '1031.28'
Avg. expression score in LCM sample: '431.516'
Tissue used: 'pure endosperm, no chalazal'
AT4G35800 NRPB1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.5 x 10-13 2265 931 958 2699 70.87% 73.80% 3196 3657 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.6e-11'
Avg. expression score for this sample: '1051.15'
Avg. expression score in LCM sample: '431.516'
Tissue used: 'full endosperm'
AT4G35800 NRPB1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.33236 x 10-1 1355 1500 612 668 47.46% 52.19% 2855 1280 TAIR8 Avg. embryo expression (dissected): '1224.84'
Avg. embryo expression (LCM): '443.895'
AT4G35800 NRPB1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.8 x 10-6 612 170 78.26% 782 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35800 NRPB1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.1 x 10-5 6576 2426 73.05% 9002 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35800 NRPB1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 4990 1356 78.63% 6346 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35790 PLDDELTA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.93294 x 10-1 21 5 8 19 80.77% 70.37% 26 27 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '88.6554'
Avg. expression score in LCM sample: '71.4319'
Tissue used: 'pure endosperm, no chalazal'
AT4G35790 PLDDELTA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.18019 x 10-1 30 11 19 19 73.17% 50.00% 41 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '132.322'
Avg. expression score in LCM sample: '71.4319'
Tissue used: 'full endosperm'
AT4G35790 PLDDELTA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.13605 x 10-1 14 12 4 5 53.85% 55.56% 26 9 TAIR8 Avg. embryo expression (dissected): '79.7868'
Avg. embryo expression (LCM): '51.0632'
AT4G35790 PLDDELTA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.71055 x 10-1 13 9 59.09% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35790 PLDDELTA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.02685 x 10-1 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35790 PLDDELTA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.84 x 10-4 39 2 95.12% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35785 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 0 2 0 100.00% 0.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.484078'
Avg. expression score for this sample: '136.614'
Avg. expression score in LCM sample: '120.479'
Tissue used: 'pure endosperm, no chalazal'
AT4G35785 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.94389 x 10-1 14 1 1 0 93.33% 0.00% 15 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.484078'
Avg. expression score for this sample: '132.791'
Avg. expression score in LCM sample: '120.479'
Tissue used: 'full endosperm'
AT4G35785 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 0 2 0 100.00% 0.00% 3 2 TAIR8 Avg. embryo expression (dissected): '221.942'
Avg. embryo expression (LCM): '185.289'
AT4G35785 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35785 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.27273 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35785 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.13324 x 10-1 17 0 100.00% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35783 RTFL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.13194'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G35783 RTFL6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '26.926'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G35783 RTFL6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G35783 RTFL6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35783 RTFL6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35783 RTFL6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G35780 STY17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 32 18 18 38 64.00% 67.86% 50 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.18299'
Avg. expression score for this sample: '224.851'
Avg. expression score in LCM sample: '179.609'
Tissue used: 'pure endosperm, no chalazal'
AT4G35780 STY17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.02344 x 10-1 86 34 53 148 71.67% 73.63% 120 201 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.18299'
Avg. expression score for this sample: '210.695'
Avg. expression score in LCM sample: '179.609'
Tissue used: 'full endosperm'
AT4G35780 STY17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.36361 x 10-1 13 5 5 11 72.22% 68.75% 18 16 TAIR8 Avg. embryo expression (dissected): '89.0364'
Avg. embryo expression (LCM): '26.9758'
AT4G35780 STY17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.6376 15 8 65.22% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'