Displaying data sets 41801 - 41900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G36197 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36197 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36195 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '127.615'
Avg. expression score in LCM sample: '47.8858'
Tissue used: 'pure endosperm, no chalazal'
AT4G36195 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '261.703'
Avg. expression score in LCM sample: '47.8858'
Tissue used: 'full endosperm'
AT4G36195 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '155.707'
Avg. embryo expression (LCM): '107.137'
AT4G36195 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36195 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36195 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.14947 x 10-1 11 7 8 14 61.11% 63.64% 18 22 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.252433'
Avg. expression score for this sample: '117.49'
Avg. expression score in LCM sample: '68.1395'
Tissue used: 'pure endosperm, no chalazal'
AT4G36190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.36704 x 10-1 30 39 12 43 43.48% 78.18% 69 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.252433'
Avg. expression score for this sample: '126.908'
Avg. expression score in LCM sample: '68.1395'
Tissue used: 'full endosperm'
AT4G36190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.1593 x 10-1 13 8 5 6 61.90% 54.55% 21 11 TAIR8 Avg. embryo expression (dissected): '152.952'
Avg. embryo expression (LCM): '111.822'
AT4G36190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.0928 x 10-2 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6 x 10-5 24 0 100.00% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-7 43 1 97.73% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.87747 x 10-1 22 4 7 13 84.62% 65.00% 26 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230601'
Avg. expression score for this sample: '152.79'
Avg. expression score in LCM sample: '139.145'
Tissue used: 'pure endosperm, no chalazal'
AT4G36180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.6224 x 10-2 45 32 56 76 58.44% 57.58% 77 132 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.230601'
Avg. expression score for this sample: '218.485'
Avg. expression score in LCM sample: '139.145'
Tissue used: 'full endosperm'
AT4G36180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.21405 x 10-1 65 50 18 18 56.52% 50.00% 115 36 TAIR8 Avg. embryo expression (dissected): '727.8'
Avg. embryo expression (LCM): '510.745'
AT4G36180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.0312 x 10-2 13 1 92.86% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.743 x 10-2 15 3 83.33% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.66082 x 10-1 38 18 67.86% 56 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G36170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.89255'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G36170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '4.25157'
Avg. embryo expression (LCM): '2.62474'
AT4G36170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36160 NAC076 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G36160 NAC076 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '5.35472'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G36160 NAC076 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '28.0211'
Avg. embryo expression (LCM): '12.8851'
AT4G36160 NAC076 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36160 NAC076 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36160 NAC076 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.20295 x 10-1 133 43 47 61 75.57% 56.48% 176 108 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.256492'
Avg. expression score for this sample: '36.096'
Avg. expression score in LCM sample: '10.6413'
Tissue used: 'pure endosperm, no chalazal'
AT4G36150 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.90123 x 10-1 293 95 132 222 75.52% 62.71% 388 354 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.256492'
Avg. expression score for this sample: '49.7461'
Avg. expression score in LCM sample: '10.6413'
Tissue used: 'full endosperm'
AT4G36150 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.055 x 10-3 135 75 18 21 64.29% 53.85% 210 39 TAIR8 Avg. embryo expression (dissected): '44.7835'
Avg. embryo expression (LCM): '30.0652'
AT4G36150 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.78176 x 10-1 24 15 61.54% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36150 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-11 98 122 44.55% 220 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36150 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.2 x 10-9 222 35 86.38% 257 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.61651 x 10-1 125 58 76 129 68.31% 62.93% 183 205 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.647731'
Avg. expression score for this sample: '29.1414'
Avg. expression score in LCM sample: '30.2042'
Tissue used: 'pure endosperm, no chalazal'
AT4G36140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.90364 x 10-1 253 90 127 228 73.76% 64.23% 343 355 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.647731'
Avg. expression score for this sample: '45.1927'
Avg. expression score in LCM sample: '30.2042'
Tissue used: 'full endosperm'
AT4G36140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.2571 x 10-1 96 86 39 38 52.75% 49.35% 182 77 TAIR8 Avg. embryo expression (dissected): '33.0394'
Avg. embryo expression (LCM): '26.5991'
AT4G36140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.07 x 10-4 69 12 85.19% 81 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.0 x 10-21 391 45 89.68% 436 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.6 x 10-7 377 93 80.21% 470 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.66 x 10-4 869 540 398 627 61.67% 61.17% 1409 1025 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005142'
Avg. expression score for this sample: '1064.75'
Avg. expression score in LCM sample: '296.486'
Tissue used: 'pure endosperm, no chalazal'
AT4G36130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.10234 x 10-1 250 115 213 450 68.49% 67.87% 365 663 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.005142'
Avg. expression score for this sample: '307.595'
Avg. expression score in LCM sample: '296.486'
Tissue used: 'full endosperm'
AT4G36130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.1935 x 10-1 2048 2094 339 396 49.44% 53.88% 4142 735 TAIR8 Avg. embryo expression (dissected): '3050.64'
Avg. embryo expression (LCM): '2748.24'
AT4G36130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.79197 x 10-1 151 101 59.92% 252 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.05997 x 10-1 1103 656 62.71% 1759 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.1 x 10-26 1333 380 77.82% 1713 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.66202 x 10-1 76 67 11 118 53.15% 91.47% 143 129 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.7e-29'
Avg. expression score for this sample: '20.0052'
Avg. expression score in LCM sample: '19.9892'
Tissue used: 'pure endosperm, no chalazal'
AT4G36120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 215 44 44 610 83.01% 93.27% 259 654 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.7e-29'
Avg. expression score for this sample: '43.4116'
Avg. expression score in LCM sample: '19.9892'
Tissue used: 'full endosperm'
AT4G36120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.86 x 10-3 87 227 30 79 27.71% 72.48% 314 109 TAIR8 Avg. embryo expression (dissected): '45.5132'
Avg. embryo expression (LCM): '43.9676'
AT4G36120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 42 7 85.71% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 x 10-30 783 6 99.24% 789 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2541 21 99.18% 2562 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36110 SAUR9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G36110 SAUR9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G36110 SAUR9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G36110 SAUR9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36110 SAUR9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36110 SAUR9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36105 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G36105 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.06007'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G36105 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.17897'
Avg. embryo expression (LCM): '1.28097'
AT4G36105 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36105 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36105 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.361657'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G36100 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.726638'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G36100 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.63792'
Avg. embryo expression (LCM): '0'
AT4G36100 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36100 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36100 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.00105 x 10-1 8 5 8 5 61.54% 38.46% 13 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.206878'
Avg. expression score for this sample: '57.6725'
Avg. expression score in LCM sample: '38.6555'
Tissue used: 'pure endosperm, no chalazal'
AT4G36090 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.17724 x 10-1 35 10 23 14 77.78% 37.84% 45 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.206878'
Avg. expression score for this sample: '64.6485'
Avg. expression score in LCM sample: '38.6555'
Tissue used: 'full endosperm'
AT4G36090 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.51186 x 10-1 7 4 4 4 63.64% 50.00% 11 8 TAIR8 Avg. embryo expression (dissected): '82.8086'
Avg. embryo expression (LCM): '52.2939'
AT4G36090 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3708 x 10-1 2 6 25.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36090 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.17788 x 10-1 77 40 65.81% 117 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36090 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.6919 x 10-2 65 27 70.65% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.65455 x 10-1 186 109 97 245 63.05% 71.64% 295 342 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0702'
Avg. expression score for this sample: '90.7292'
Avg. expression score in LCM sample: '82.7199'
Tissue used: 'pure endosperm, no chalazal'
AT4G36080 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.0824 x 10-2 297 119 166 401 71.39% 70.72% 416 567 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0702'
Avg. expression score for this sample: '132.435'
Avg. expression score in LCM sample: '82.7199'
Tissue used: 'full endosperm'
AT4G36080 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08346 x 10-1 237 215 84 81 52.43% 49.09% 452 165 TAIR8 Avg. embryo expression (dissected): '156.831'
Avg. embryo expression (LCM): '128.738'
AT4G36080 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.15473 x 10-1 71 36 66.36% 107 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36080 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.68 x 10-4 566 171 76.80% 737 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36080 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.9 x 10-6 599 164 78.51% 763 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36070 CPK18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G36070 CPK18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.664135'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G36070 CPK18 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '1.19631'
Avg. embryo expression (LCM): '0'
AT4G36070 CPK18 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36070 CPK18 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36070 CPK18 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36060 bHLH11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.257186'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G36060 bHLH11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 1 0 100.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.22879'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G36060 bHLH11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.58239'
Avg. embryo expression (LCM): '2.52427'
AT4G36060 bHLH11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36060 bHLH11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36060 bHLH11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36052 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.72918 x 10-1 33 1 13 17 97.06% 56.67% 34 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00245'
Avg. expression score for this sample: '20.7652'
Avg. expression score in LCM sample: '8.70117'
Tissue used: 'pure endosperm, no chalazal'
AT4G36052 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.314 x 10-3 86 9 21 37 90.53% 63.79% 95 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00245'
Avg. expression score for this sample: '32.4204'
Avg. expression score in LCM sample: '8.70117'
Tissue used: 'full endosperm'