Displaying data sets 41401 - 41500 of 169464 in total
Download CSV  
Show/hide fields
All
None
Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G36860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 4 0 11 0.00% 100.00% 4 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.787081'
Avg. expression score for this sample: '91.762'
Avg. expression score in LCM sample: '31.4976'
Tissue used: 'pure endosperm, no chalazal'
AT4G36860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.49482 x 10-1 0 8 0 6 0.00% 100.00% 8 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.787081'
Avg. expression score for this sample: '71.2311'
Avg. expression score in LCM sample: '31.4976'
Tissue used: 'full endosperm'
AT4G36860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '45.7522'
Avg. embryo expression (LCM): '38.1655'
AT4G36860 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.09677 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.71261 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36860 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.55 x 10-4 0 13 0.00% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 1 0 0 83.33% 6 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '10.6529'
Avg. expression score in LCM sample: '6.76104'
Tissue used: 'pure endosperm, no chalazal'
AT4G36850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.80172 x 10-1 2 4 2 4 33.33% 66.67% 6 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '23.5097'
Avg. expression score in LCM sample: '6.76104'
Tissue used: 'full endosperm'
AT4G36850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 8 3 2 50.00% 40.00% 16 5 TAIR8 Avg. embryo expression (dissected): '24.5648'
Avg. embryo expression (LCM): '2.88847'
AT4G36850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.21053 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 34 13 12 20 72.34% 62.50% 47 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.654417'
Avg. expression score for this sample: '133.225'
Avg. expression score in LCM sample: '52.6626'
Tissue used: 'pure endosperm, no chalazal'
AT4G36840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.56648 x 10-1 42 15 16 32 73.68% 66.67% 57 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.654417'
Avg. expression score for this sample: '102.015'
Avg. expression score in LCM sample: '52.6626'
Tissue used: 'full endosperm'
AT4G36840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 16 13 7 5 55.17% 41.67% 29 12 TAIR8 Avg. embryo expression (dissected): '129.607'
Avg. embryo expression (LCM): '71.8351'
AT4G36840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.44266 x 10-1 4 5 44.44% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.5241 x 10-2 47 11 81.03% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.6 x 10-5 93 9 91.18% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36830 HOS3-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.6478 x 10-2 66 2 34 64 97.06% 65.31% 68 98 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.1e-06'
Avg. expression score for this sample: '79.8497'
Avg. expression score in LCM sample: '4.2183'
Tissue used: 'pure endosperm, no chalazal'
AT4G36830 HOS3-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.0 x 10-5 84 18 9 75 82.35% 89.29% 102 84 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '4.1e-06'
Avg. expression score for this sample: '51.1684'
Avg. expression score in LCM sample: '4.2183'
Tissue used: 'full endosperm'
AT4G36830 HOS3-1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.28355 x 10-1 35 23 8 9 60.34% 52.94% 58 17 TAIR8 Avg. embryo expression (dissected): '60.6094'
Avg. embryo expression (LCM): '38.492'
AT4G36830 HOS3-1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.92159 x 10-1 22 3 88.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36830 HOS3-1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.4 x 10-16 389 6 98.48% 395 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36830 HOS3-1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-17 384 4 98.97% 388 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.11101'
Avg. expression score in LCM sample: '1.33751'
Tissue used: 'pure endosperm, no chalazal'
AT4G36820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 3 100.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.633406'
Avg. expression score in LCM sample: '1.33751'
Tissue used: 'full endosperm'
AT4G36820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G36820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.77419 x 10-1 13 17 43.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.73921 x 10-1 134 56 70.53% 190 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36810 GGPS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '444.837'
Avg. expression score in LCM sample: '208.99'
Tissue used: 'pure endosperm, no chalazal'
AT4G36810 GGPS1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '864.485'
Avg. expression score in LCM sample: '208.99'
Tissue used: 'full endosperm'
AT4G36810 GGPS1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1665.36'
Avg. embryo expression (LCM): '1419.26'
AT4G36810 GGPS1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36810 GGPS1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36810 GGPS1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36800 RCE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 6 2 3 8 75.00% 72.73% 8 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.041534'
Avg. expression score for this sample: '109.273'
Avg. expression score in LCM sample: '114.6'
Tissue used: 'pure endosperm, no chalazal'
AT4G36800 RCE1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.8201 x 10-2 30 11 9 51 73.17% 85.00% 41 60 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.041534'
Avg. expression score for this sample: '459.187'
Avg. expression score in LCM sample: '114.6'
Tissue used: 'full endosperm'
AT4G36800 RCE1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.33213 x 10-1 5 11 3 1 31.25% 25.00% 16 4 TAIR8 Avg. embryo expression (dissected): '145.678'
Avg. embryo expression (LCM): '206.865'
AT4G36800 RCE1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.22671 x 10-1 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36800 RCE1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 42 11 79.25% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36800 RCE1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.61816 x 10-1 72 17 80.90% 89 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36791 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '27.6223'
Avg. expression score in LCM sample: '149.831'
Tissue used: 'pure endosperm, no chalazal'
AT4G36791 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '35.8909'
Avg. expression score in LCM sample: '149.831'
Tissue used: 'full endosperm'
AT4G36791 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.81865'
Avg. embryo expression (LCM): '12.1944'
AT4G36791 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36791 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36791 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.19 x 10-4 18 2 0 26 90.00% 100.00% 20 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-19'
Avg. expression score for this sample: '126.274'
Avg. expression score in LCM sample: '10.2591'
Tissue used: 'pure endosperm, no chalazal'
AT4G36790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.8 x 10-17 68 3 1 113 95.77% 99.12% 71 114 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-19'
Avg. expression score for this sample: '238.236'
Avg. expression score in LCM sample: '10.2591'
Tissue used: 'full endosperm'
AT4G36790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 2 1 3 50.00% 75.00% 4 4 TAIR8 Avg. embryo expression (dissected): '23.0554'
Avg. embryo expression (LCM): '1.45679'
AT4G36790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 62 1 98.41% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.48325 x 10-1 158 1 99.37% 159 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.49732 x 10-1 275 2 99.28% 277 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36780 BEH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.23077 x 10-1 1 0 1 6 100.00% 85.71% 1 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.049691'
Avg. expression score for this sample: '369.711'
Avg. expression score in LCM sample: '118.891'
Tissue used: 'pure endosperm, no chalazal'
AT4G36780 BEH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.3422 x 10-2 16 2 6 26 88.89% 81.25% 18 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.049691'
Avg. expression score for this sample: '648.151'
Avg. expression score in LCM sample: '118.891'
Tissue used: 'full endosperm'
AT4G36780 BEH2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 2 0 0 60.00% 5 0 TAIR8 Avg. embryo expression (dissected): '389.493'
Avg. embryo expression (LCM): '181.597'
AT4G36780 BEH2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.82406 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36780 BEH2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 58 10 85.29% 68 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36780 BEH2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.187 x 10-3 86 1 98.85% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.42424 x 10-1 1 1 4 0 50.00% 0.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.637186'
Avg. expression score for this sample: '14.882'
Avg. expression score in LCM sample: '2.98368'
Tissue used: 'pure endosperm, no chalazal'
AT4G36770 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.637186'
Avg. expression score for this sample: '24.0461'
Avg. expression score in LCM sample: '2.98368'
Tissue used: 'full endosperm'
AT4G36770 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '22.0809'
Avg. embryo expression (LCM): '4.2448'
AT4G36770 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36770 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.54545 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36770 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9412 x 10-2 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36760 APP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 12 5 4 4 70.59% 50.00% 17 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.100374'
Avg. expression score for this sample: '474.384'
Avg. expression score in LCM sample: '337.714'
Tissue used: 'pure endosperm, no chalazal'
AT4G36760 APP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.2875 x 10-2 44 3 13 24 93.62% 64.86% 47 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.100374'
Avg. expression score for this sample: '736.977'
Avg. expression score in LCM sample: '337.714'
Tissue used: 'full endosperm'
AT4G36760 APP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.22393 x 10-1 9 4 2 0 69.23% 0.00% 13 2 TAIR8 Avg. embryo expression (dissected): '453.69'
Avg. embryo expression (LCM): '222.488'
AT4G36760 APP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.52809 x 10-1 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36760 APP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.15745 x 10-1 46 9 83.64% 55 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36760 APP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.03 x 10-4 134 8 94.37% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 198 70 112 164 73.88% 59.42% 268 276 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.022163'
Avg. expression score for this sample: '349.961'
Avg. expression score in LCM sample: '199.598'
Tissue used: 'pure endosperm, no chalazal'
AT4G36750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.653 x 10-3 268 55 112 226 82.97% 66.86% 323 338 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.022163'
Avg. expression score for this sample: '270.726'
Avg. expression score in LCM sample: '199.598'
Tissue used: 'full endosperm'
AT4G36750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.95675 x 10-1 120 81 48 27 59.70% 36.00% 201 75 TAIR8 Avg. embryo expression (dissected): '250.104'
Avg. embryo expression (LCM): '148.405'
AT4G36750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.75195 x 10-1 43 19 69.35% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.72 x 10-4 228 149 60.48% 377 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.2 x 10-22 376 29 92.84% 405 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36740 HB40 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.93818'
Avg. expression score in LCM sample: '1.83724'
Tissue used: 'pure endosperm, no chalazal'
AT4G36740 HB40 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.76193'
Avg. expression score in LCM sample: '1.83724'
Tissue used: 'full endosperm'
AT4G36740 HB40 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 2 1 0 33.33% 0.00% 3 1 TAIR8 Avg. embryo expression (dissected): '27.2489'
Avg. embryo expression (LCM): '14.1661'
AT4G36740 HB40 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36740 HB40 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36740 HB40 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36730 GBF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '15.9022'
Avg. expression score in LCM sample: '6.89332'
Tissue used: 'pure endosperm, no chalazal'
AT4G36730 GBF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '35.4884'
Avg. expression score in LCM sample: '6.89332'
Tissue used: 'full endosperm'
AT4G36730 GBF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '39.6678'
Avg. embryo expression (LCM): '18.4988'
AT4G36730 GBF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36730 GBF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36730 GBF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36720 HVA22K endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.69921 x 10-1 2 2 4 3 50.00% 42.86% 4 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.747527'
Avg. expression score for this sample: '38.0519'
Avg. expression score in LCM sample: '24.0605'
Tissue used: 'pure endosperm, no chalazal'
AT4G36720 HVA22K endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 0 3 4 100.00% 57.14% 2 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.747527'
Avg. expression score for this sample: '78.0336'
Avg. expression score in LCM sample: '24.0605'
Tissue used: 'full endosperm'
AT4G36720 HVA22K embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '24.8922'
Avg. embryo expression (LCM): '33.2174'
AT4G36720 HVA22K endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36720 HVA22K endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 11 9 55.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36720 HVA22K endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4658 x 10-2 24 4 85.71% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36710 HAM4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.57977 x 10-1 0 11 0 11 0.00% 100.00% 11 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '15.0695'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G36710 HAM4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.20195 x 10-1 10 5 0 10 66.67% 100.00% 15 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '20.4981'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G36710 HAM4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 3 0 1 25.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '4.21776'
Avg. embryo expression (LCM): '1.33121'
AT4G36710 HAM4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'