Displaying data sets 41301 - 41400 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G37000 ACD2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.4441 x 10-2 494 390 110 102 55.88% 48.11% 884 212 TAIR8 Avg. embryo expression (dissected): '1078.44'
Avg. embryo expression (LCM): '657.379'
AT4G37000 ACD2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.373 x 10-3 193 127 60.31% 320 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37000 ACD2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 571 51 91.80% 622 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37000 ACD2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 955 100 90.52% 1055 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36990 HSF4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.49892 x 10-1 49 27 21 65 64.47% 75.58% 76 86 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000013'
Avg. expression score for this sample: '1769.48'
Avg. expression score in LCM sample: '19.0485'
Tissue used: 'pure endosperm, no chalazal'
AT4G36990 HSF4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8 x 10-9 76 6 7 82 92.68% 92.13% 82 89 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000013'
Avg. expression score for this sample: '1459.31'
Avg. expression score in LCM sample: '19.0485'
Tissue used: 'full endosperm'
AT4G36990 HSF4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.06458 x 10-1 15 15 15 22 50.00% 59.46% 30 37 TAIR8 Avg. embryo expression (dissected): '1106.89'
Avg. embryo expression (LCM): '61.6249'
AT4G36990 HSF4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.2043 x 10-2 26 0 100.00% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36990 HSF4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.868 x 10-3 35 0 100.00% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36990 HSF4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.8 x 10-9 109 0 100.00% 109 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36988 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.0513'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G36988 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.99813'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G36988 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6.5551'
Avg. embryo expression (LCM): '0'
AT4G36988 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36988 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36988 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.07532 x 10-1 262 64 174 183 80.37% 51.26% 326 357 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.808251'
Avg. expression score for this sample: '871.13'
Avg. expression score in LCM sample: '267.443'
Tissue used: 'pure endosperm, no chalazal'
AT4G36980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.65181 x 10-1 132 27 49 68 83.02% 58.12% 159 117 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.808251'
Avg. expression score for this sample: '892.155'
Avg. expression score in LCM sample: '267.443'
Tissue used: 'full endosperm'
AT4G36980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.73798 x 10-1 129 104 44 38 55.36% 46.34% 233 82 TAIR8 Avg. embryo expression (dissected): '806.88'
Avg. embryo expression (LCM): '401.699'
AT4G36980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.41815 x 10-1 16 3 84.21% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.8797 x 10-2 53 13 80.30% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.6 x 10-12 104 5 95.41% 109 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.27876'
Avg. expression score in LCM sample: '11.1116'
Tissue used: 'pure endosperm, no chalazal'
AT4G36970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.5788'
Avg. expression score in LCM sample: '11.1116'
Tissue used: 'full endosperm'
AT4G36970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '46.5312'
Avg. embryo expression (LCM): '45.8639'
AT4G36970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.72028 x 10-1 33 19 15 46 63.46% 75.41% 52 61 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.42092'
Avg. expression score for this sample: '155.974'
Avg. expression score in LCM sample: '118.789'
Tissue used: 'pure endosperm, no chalazal'
AT4G36960 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.60669 x 10-1 22 10 7 24 68.75% 77.42% 32 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.42092'
Avg. expression score for this sample: '175.549'
Avg. expression score in LCM sample: '118.789'
Tissue used: 'full endosperm'
AT4G36960 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.38262 x 10-1 14 21 4 8 40.00% 66.67% 35 12 TAIR8 Avg. embryo expression (dissected): '127.302'
Avg. embryo expression (LCM): '111.972'
AT4G36960 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.94425 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36960 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.32 x 10-4 41 2 95.35% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36960 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.82908 x 10-1 41 12 77.36% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36950 MAPKKK21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.15 x 10-4 168 47 43 149 78.14% 77.60% 215 192 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.3e-14'
Avg. expression score for this sample: '165.188'
Avg. expression score in LCM sample: '29.8662'
Tissue used: 'pure endosperm, no chalazal'
AT4G36950 MAPKKK21 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.3 x 10-12 156 53 45 355 74.64% 88.75% 209 400 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.3e-14'
Avg. expression score for this sample: '254.82'
Avg. expression score in LCM sample: '29.8662'
Tissue used: 'full endosperm'
AT4G36950 MAPKKK21 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.23884 x 10-1 45 24 8 9 65.22% 52.94% 69 17 TAIR8 Avg. embryo expression (dissected): '62.1698'
Avg. embryo expression (LCM): '21.7389'
AT4G36950 MAPKKK21 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.022 x 10-3 67 3 95.71% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36950 MAPKKK21 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.1677 x 10-2 365 111 76.68% 476 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36950 MAPKKK21 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9888 x 10-2 531 89 85.65% 620 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36945 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '15.3685'
Avg. expression score in LCM sample: '1.98422'
Tissue used: 'pure endosperm, no chalazal'
AT4G36945 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '45.744'
Avg. expression score in LCM sample: '1.98422'
Tissue used: 'full endosperm'
AT4G36945 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '12.9784'
Avg. embryo expression (LCM): '10.1724'
AT4G36945 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36945 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36945 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.33333 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36940 NAPRT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.07678 x 10-1 10 0 9 0 100.00% 0.00% 10 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.236285'
Avg. expression score for this sample: '23.8386'
Avg. expression score in LCM sample: '21.5324'
Tissue used: 'pure endosperm, no chalazal'
AT4G36940 NAPRT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.99792 x 10-1 9 0 9 0 100.00% 0.00% 9 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.236285'
Avg. expression score for this sample: '28.8861'
Avg. expression score in LCM sample: '21.5324'
Tissue used: 'full endosperm'
AT4G36940 NAPRT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 5 0 2 0 100.00% 0.00% 5 2 TAIR8 Avg. embryo expression (dissected): '18.5896'
Avg. embryo expression (LCM): '11.2776'
AT4G36940 NAPRT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.10507 x 10-1 0 4 0.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36940 NAPRT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.87179 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36940 NAPRT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.76 x 10-4 14 0 100.00% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36930 SPT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.751317'
Avg. expression score for this sample: '147.137'
Avg. expression score in LCM sample: '54.7203'
Tissue used: 'pure endosperm, no chalazal'
AT4G36930 SPT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 1 7 7 83.33% 50.00% 6 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.751317'
Avg. expression score for this sample: '150.176'
Avg. expression score in LCM sample: '54.7203'
Tissue used: 'full endosperm'
AT4G36930 SPT embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 2 0 0 50.00% 4 0 TAIR8 Avg. embryo expression (dissected): '161.798'
Avg. embryo expression (LCM): '161.152'
AT4G36930 SPT endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36930 SPT endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36930 SPT endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36925 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.83635'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G36925 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 3 0.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.65168'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G36925 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '7.49175'
Avg. embryo expression (LCM): '5.34995'
AT4G36925 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36925 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.64286 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36925 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36920 AP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.090226'
Avg. expression score for this sample: '33.0555'
Avg. expression score in LCM sample: '14.404'
Tissue used: 'pure endosperm, no chalazal'
AT4G36920 AP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.0226 x 10-2 7 0 0 4 100.00% 100.00% 7 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.090226'
Avg. expression score for this sample: '83.9118'
Avg. expression score in LCM sample: '14.404'
Tissue used: 'full endosperm'
AT4G36920 AP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '125.53'
Avg. embryo expression (LCM): '147.752'
AT4G36920 AP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36920 AP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.52941 x 10-1 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36920 AP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 25 0 100.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36910 LEJ2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.65998 x 10-1 22 11 17 27 66.67% 61.36% 33 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.800051'
Avg. expression score for this sample: '64.5236'
Avg. expression score in LCM sample: '16.9467'
Tissue used: 'pure endosperm, no chalazal'
AT4G36910 LEJ2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 31 13 8 9 70.45% 52.94% 44 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.800051'
Avg. expression score for this sample: '95.3077'
Avg. expression score in LCM sample: '16.9467'
Tissue used: 'full endosperm'
AT4G36910 LEJ2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.73332 x 10-1 45 20 26 10 69.23% 27.78% 65 36 TAIR8 Avg. embryo expression (dissected): '107.083'
Avg. embryo expression (LCM): '48.6268'
AT4G36910 LEJ2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.8931 x 10-1 4 5 44.44% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36910 LEJ2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36910 LEJ2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36900 RAP2.10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '93.3521'
Avg. expression score in LCM sample: '18.681'
Tissue used: 'pure endosperm, no chalazal'
AT4G36900 RAP2.10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '120.87'
Avg. expression score in LCM sample: '18.681'
Tissue used: 'full endosperm'
AT4G36900 RAP2.10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '23.3152'
Avg. embryo expression (LCM): '2.46148'
AT4G36900 RAP2.10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36900 RAP2.10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36900 RAP2.10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36890 IRX14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '271.477'
Avg. expression score in LCM sample: '152.77'
Tissue used: 'pure endosperm, no chalazal'
AT4G36890 IRX14 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 2 0 5 0.00% 100.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '468.167'
Avg. expression score in LCM sample: '152.77'
Tissue used: 'full endosperm'
AT4G36890 IRX14 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '179.695'
Avg. embryo expression (LCM): '109.825'
AT4G36890 IRX14 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36890 IRX14 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36890 IRX14 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36880 CP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.30596'
Avg. expression score in LCM sample: '2.0871'
Tissue used: 'pure endosperm, no chalazal'
AT4G36880 CP1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.81247'
Avg. expression score in LCM sample: '2.0871'
Tissue used: 'full endosperm'
AT4G36880 CP1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.3551'
Avg. embryo expression (LCM): '16.9666'
AT4G36880 CP1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36880 CP1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36880 CP1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36870 BLH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 0 2 66.67% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.097497'
Avg. expression score for this sample: '132.11'
Avg. expression score in LCM sample: '1.74905'
Tissue used: 'pure endosperm, no chalazal'
AT4G36870 BLH2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.30014 x 10-1 4 2 0 15 66.67% 100.00% 6 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.097497'
Avg. expression score for this sample: '214.849'
Avg. expression score in LCM sample: '1.74905'
Tissue used: 'full endosperm'
AT4G36870 BLH2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 5 1 4 16.67% 80.00% 6 5 TAIR8 Avg. embryo expression (dissected): '275.6'
Avg. embryo expression (LCM): '99.0118'
AT4G36870 BLH2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36870 BLH2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.37245 x 10-1 23 0 100.00% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G36870 BLH2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.529 x 10-3 21 21 50.00% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'