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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G37290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 9 0 100.00% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '7.2313'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G37290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.16212'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G37290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.29919'
Avg. embryo expression (LCM): '0'
AT4G37290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4 x 10-7 90 7 92.78% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 52 9 31 25 85.25% 44.64% 61 56 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.404741'
Avg. expression score for this sample: '293.548'
Avg. expression score in LCM sample: '123.521'
Tissue used: 'pure endosperm, no chalazal'
AT4G37280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.76961 x 10-1 130 39 43 72 76.92% 62.61% 169 115 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.404741'
Avg. expression score for this sample: '482.335'
Avg. expression score in LCM sample: '123.521'
Tissue used: 'full endosperm'
AT4G37280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.109 x 10-3 79 31 15 13 71.82% 46.43% 110 28 TAIR8 Avg. embryo expression (dissected): '374.967'
Avg. embryo expression (LCM): '287.843'
AT4G37280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0077 38 5 88.37% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37270 HMA1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.0 x 10-16 732 91 88.94% 823 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37270 HMA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.16041 x 10-1 250 107 94 235 70.03% 71.43% 357 329 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.3e-20'
Avg. expression score for this sample: '321.388'
Avg. expression score in LCM sample: '40.8455'
Tissue used: 'pure endosperm, no chalazal'
AT4G37270 HMA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5 x 10-21 937 339 239 1150 73.43% 82.79% 1276 1389 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.3e-20'
Avg. expression score for this sample: '627.16'
Avg. expression score in LCM sample: '40.8455'
Tissue used: 'full endosperm'
AT4G37270 HMA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.14791 x 10-1 931 1014 289 283 47.87% 49.48% 1945 572 TAIR8 Avg. embryo expression (dissected): '1650.12'
Avg. embryo expression (LCM): '178.709'
AT4G37270 HMA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.04 x 10-4 164 23 87.70% 187 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37270 HMA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3 x 10-5 289 44 86.79% 333 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37260 MYB73 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.8 x 10-22 1075 135 88.84% 1210 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37260 MYB73 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.08 x 10-4 561 224 158 469 71.46% 74.80% 785 627 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-32'
Avg. expression score for this sample: '846.499'
Avg. expression score in LCM sample: '21.3267'
Tissue used: 'pure endosperm, no chalazal'
AT4G37260 MYB73 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1411 539 311 1681 72.36% 84.39% 1950 1992 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-32'
Avg. expression score for this sample: '1996.76'
Avg. expression score in LCM sample: '21.3267'
Tissue used: 'full endosperm'
AT4G37260 MYB73 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.79913 x 10-1 1901 1925 605 687 49.69% 53.17% 3826 1292 TAIR8 Avg. embryo expression (dissected): '5375.33'
Avg. embryo expression (LCM): '464.353'
AT4G37260 MYB73 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.2365 x 10-2 261 53 83.12% 314 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37260 MYB73 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.0 x 10-11 471 59 88.87% 530 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5 x 10-11 86 1 98.85% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.02493 x 10-1 127 25 43 50 83.55% 53.76% 152 93 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.62708'
Avg. expression score for this sample: '57.722'
Avg. expression score in LCM sample: '66.0524'
Tissue used: 'pure endosperm, no chalazal'
AT4G37250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.71671 x 10-1 40 17 24 23 70.18% 48.94% 57 47 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.62708'
Avg. expression score for this sample: '77.4669'
Avg. expression score in LCM sample: '66.0524'
Tissue used: 'full endosperm'
AT4G37250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.087 x 10-3 62 18 14 9 77.50% 39.13% 80 23 TAIR8 Avg. embryo expression (dissected): '41.0445'
Avg. embryo expression (LCM): '14.5679'
AT4G37250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.01569 x 10-1 14 4 77.78% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8 x 10-8 71 2 97.26% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1026.11'
Avg. expression score in LCM sample: '75.8118'
Tissue used: 'pure endosperm, no chalazal'
AT4G37240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2685.78'
Avg. expression score in LCM sample: '75.8118'
Tissue used: 'full endosperm'
AT4G37240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1140.3'
Avg. embryo expression (LCM): '545.168'
AT4G37240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37235 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37235 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G37235 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G37235 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.911528'
Avg. embryo expression (LCM): '0'
AT4G37235 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37235 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G37230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G37230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.28461'
Avg. embryo expression (LCM): '5.55089'
AT4G37230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37225 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37225 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.94484'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G37225 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.67736'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G37225 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '34.7586'
Avg. embryo expression (LCM): '9.65755'
AT4G37225 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37225 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.72984 x 10-1 12 10 54.55% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.56088'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G37220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 2 0 4 0.00% 100.00% 2 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.73722'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G37220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 2 4 1 0 33.33% 0.00% 6 1 TAIR8 Avg. embryo expression (dissected): '17.0476'
Avg. embryo expression (LCM): '0'
AT4G37220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.64241 x 10-1 17 17 50.00% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.9 x 10-7 872 480 64.50% 1352 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.13616 x 10-1 196 184 83 361 51.58% 81.31% 380 444 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.1e-06'
Avg. expression score for this sample: '180.838'
Avg. expression score in LCM sample: '160.575'
Tissue used: 'pure endosperm, no chalazal'
AT4G37210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 9.3 x 10-8 301 126 214 767 70.49% 78.19% 427 981 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.1e-06'
Avg. expression score for this sample: '171.846'
Avg. expression score in LCM sample: '160.575'
Tissue used: 'full endosperm'
AT4G37210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.93 x 10-4 292 508 91 142 36.50% 60.94% 800 233 TAIR8 Avg. embryo expression (dissected): '351.008'
Avg. embryo expression (LCM): '307.321'
AT4G37210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.25051 x 10-1 106 35 75.18% 141 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.24 x 10-4 1807 533 77.22% 2340 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37200 HCF164 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.81385 x 10-1 34 19 64.15% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37200 HCF164 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.21513 x 10-1 53 41 20 61 56.38% 75.31% 94 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.620001'
Avg. expression score for this sample: '607.747'
Avg. expression score in LCM sample: '261.211'
Tissue used: 'pure endosperm, no chalazal'
AT4G37200 HCF164 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.10743 x 10-1 86 73 68 177 54.09% 72.24% 159 245 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.620001'
Avg. expression score for this sample: '511.171'
Avg. expression score in LCM sample: '261.211'
Tissue used: 'full endosperm'
AT4G37200 HCF164 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.80683 x 10-1 48 66 5 8 42.11% 61.54% 114 13 TAIR8 Avg. embryo expression (dissected): '801.462'
Avg. embryo expression (LCM): '655.131'
AT4G37200 HCF164 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.48332 x 10-1 20 8 71.43% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37200 HCF164 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.27569 x 10-1 34 14 70.83% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37190 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9413 x 10-2 62 44 58.49% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 10 7 22 44.44% 75.86% 18 29 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.381238'
Avg. expression score for this sample: '22.8956'
Avg. expression score in LCM sample: '13.816'
Tissue used: 'pure endosperm, no chalazal'
AT4G37190 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.52349 x 10-1 36 25 14 73 59.02% 83.91% 61 87 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.381238'
Avg. expression score for this sample: '48.655'
Avg. expression score in LCM sample: '13.816'
Tissue used: 'full endosperm'
AT4G37190 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.211 x 10-3 10 42 4 6 19.23% 60.00% 52 10 TAIR8 Avg. embryo expression (dissected): '45.7587'
Avg. embryo expression (LCM): '79.4958'
AT4G37190 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.2822 x 10-1 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37190 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.86998 x 10-1 76 26 74.51% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '157.915'
Avg. expression score in LCM sample: '161.574'
Tissue used: 'pure endosperm, no chalazal'
AT4G37180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '239.113'
Avg. expression score in LCM sample: '161.574'
Tissue used: 'full endosperm'
AT4G37180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '158.689'
Avg. embryo expression (LCM): '138.056'
AT4G37180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37175 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G37175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G37175 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G37175 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37175 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37170 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.5934 x 10-2 10 0 100.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '13.3169'
Avg. expression score in LCM sample: '16.2853'
Tissue used: 'pure endosperm, no chalazal'
AT4G37170 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 1 0 0.00% 0.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '20.3178'
Avg. expression score in LCM sample: '16.2853'
Tissue used: 'full endosperm'
AT4G37170 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 0 2 0.00% 100.00% 1 2 TAIR8 Avg. embryo expression (dissected): '43.7864'
Avg. embryo expression (LCM): '46.6049'
AT4G37170 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37170 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37160 sks15 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37160 sks15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.04516'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G37160 sks15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.208803'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G37160 sks15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'