Displaying data sets 41001 - 41100 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G37440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.89073 x 10-1 7 11 4 5 38.89% 55.56% 18 9 TAIR8 Avg. embryo expression (dissected): '395.563'
Avg. embryo expression (LCM): '237.797'
AT4G37440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.72798 x 10-1 8 6 57.14% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.9793 x 10-2 322 194 62.40% 516 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.59275 x 10-1 138 53 72.25% 191 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37432 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '50.7573'
Avg. expression score in LCM sample: '26.7502'
Tissue used: 'pure endosperm, no chalazal'
AT4G37432 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '22.991'
Avg. expression score in LCM sample: '26.7502'
Tissue used: 'full endosperm'
AT4G37432 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 2.14286 x 10-1 4 0 0 0 100.00% 4 0 TAIR8 Avg. embryo expression (dissected): '47.4494'
Avg. embryo expression (LCM): '45.7132'
AT4G37432 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37432 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37432 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37430 CYP91A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '74.4808'
Avg. expression score in LCM sample: '43.3442'
Tissue used: 'pure endosperm, no chalazal'
AT4G37430 CYP91A2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '45.1601'
Avg. expression score in LCM sample: '43.3442'
Tissue used: 'full endosperm'
AT4G37430 CYP91A2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '100.946'
Avg. embryo expression (LCM): '79.119'
AT4G37430 CYP91A2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37430 CYP91A2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37430 CYP91A2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.147511'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G37420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.409802'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G37420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G37420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37410 CYP81F4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 2 0 0.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.4'
Avg. expression score for this sample: '.302912'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G37410 CYP81F4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.4'
Avg. expression score for this sample: '.404717'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G37410 CYP81F4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 0 3 0 0 0.00% 3 0 TAIR8 Avg. embryo expression (dissected): '.337583'
Avg. embryo expression (LCM): '0'
AT4G37410 CYP81F4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37410 CYP81F4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37410 CYP81F4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37409 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.875645'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G37409 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 0 2 2 100.00% 50.00% 5 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.64396'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G37409 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 0 4 0 1 0.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '1.73909'
Avg. embryo expression (LCM): '4.21968'
AT4G37409 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37409 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37409 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37400 CYP81F3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 2 0 0 0.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.449482'
Avg. expression score for this sample: '1.95424'
Avg. expression score in LCM sample: '1.71966'
Tissue used: 'pure endosperm, no chalazal'
AT4G37400 CYP81F3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.80172 x 10-1 3 6 0 3 33.33% 100.00% 9 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.449482'
Avg. expression score for this sample: '3.41497'
Avg. expression score in LCM sample: '1.71966'
Tissue used: 'full endosperm'
AT4G37400 CYP81F3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '2.80896'
Avg. embryo expression (LCM): '.728397'
AT4G37400 CYP81F3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37400 CYP81F3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 6 40.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37400 CYP81F3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 3 40.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37390 BRU6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 59 11 25 11 84.29% 30.56% 70 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.521999'
Avg. expression score for this sample: '20.588'
Avg. expression score in LCM sample: '1.3816'
Tissue used: 'pure endosperm, no chalazal'
AT4G37390 BRU6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.31952 x 10-1 22 0 35 30 100.00% 46.15% 22 65 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.521999'
Avg. expression score for this sample: '13.4927'
Avg. expression score in LCM sample: '1.3816'
Tissue used: 'full endosperm'
AT4G37390 BRU6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.1 x 10-8 439 178 80 37 71.15% 31.62% 617 117 TAIR8 Avg. embryo expression (dissected): '214.249'
Avg. embryo expression (LCM): '91.4767'
AT4G37390 BRU6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3 x 10-5 40 2 95.24% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37390 BRU6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.3039 x 10-2 111 35 76.03% 146 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37390 BRU6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2003 50 97.56% 2053 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.7308 x 10-2 59 5 16 21 92.19% 56.76% 64 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003307'
Avg. expression score for this sample: '23.098'
Avg. expression score in LCM sample: '10.8471'
Tissue used: 'pure endosperm, no chalazal'
AT4G37380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.2431 x 10-2 92 15 30 59 85.98% 66.29% 107 89 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003307'
Avg. expression score for this sample: '36.307'
Avg. expression score in LCM sample: '10.8471'
Tissue used: 'full endosperm'
AT4G37380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.2 x 10-5 119 25 31 12 82.64% 27.91% 144 43 TAIR8 Avg. embryo expression (dissected): '69.6652'
Avg. embryo expression (LCM): '43.0131'
AT4G37380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.78777 x 10-1 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.1485 x 10-2 74 38 66.07% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.0 x 10-6 215 18 92.27% 233 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37370 CYP81D8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 4 0 1 2 100.00% 66.67% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '20.2531'
Avg. expression score in LCM sample: '13.2869'
Tissue used: 'pure endosperm, no chalazal'
AT4G37370 CYP81D8 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.36889 x 10-1 12 10 9 21 54.55% 70.00% 22 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '33.9679'
Avg. expression score in LCM sample: '13.2869'
Tissue used: 'full endosperm'
AT4G37370 CYP81D8 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '3.59652'
Avg. embryo expression (LCM): '0'
AT4G37370 CYP81D8 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.06289 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37370 CYP81D8 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.225 x 10-3 76 9 89.41% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37370 CYP81D8 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-14 1122 34 97.06% 1156 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37360 CYP81D2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.27249 x 10-1 46 23 48 66 66.67% 57.89% 69 114 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.795639'
Avg. expression score for this sample: '139.848'
Avg. expression score in LCM sample: '219.925'
Tissue used: 'pure endosperm, no chalazal'
AT4G37360 CYP81D2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.76609 x 10-1 226 105 99 230 68.28% 69.91% 331 329 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.795639'
Avg. expression score for this sample: '204.518'
Avg. expression score in LCM sample: '219.925'
Tissue used: 'full endosperm'
AT4G37360 CYP81D2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 0 0 33.33% 3 0 TAIR8 Avg. embryo expression (dissected): '4.89818'
Avg. embryo expression (LCM): '0'
AT4G37360 CYP81D2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.47973 x 10-1 23 5 82.14% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37360 CYP81D2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.301 x 10-3 1403 882 61.40% 2285 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37360 CYP81D2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9269 x 10-2 245 86 74.02% 331 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37340 CYP81D3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.487607'
Avg. expression score for this sample: '14.074'
Avg. expression score in LCM sample: '3.4981'
Tissue used: 'pure endosperm, no chalazal'
AT4G37340 CYP81D3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.84078 x 10-1 12 3 1 5 80.00% 83.33% 15 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.487607'
Avg. expression score for this sample: '34.0164'
Avg. expression score in LCM sample: '3.4981'
Tissue used: 'full endosperm'
AT4G37340 CYP81D3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.614464'
Avg. embryo expression (LCM): '0'
AT4G37340 CYP81D3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37340 CYP81D3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.09682 x 10-1 8 4 66.67% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37340 CYP81D3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.17391 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37330 CYP81D4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 3 7 7 75.00% 50.00% 12 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.849027'
Avg. expression score for this sample: '15.4621'
Avg. expression score in LCM sample: '12.067'
Tissue used: 'pure endosperm, no chalazal'
AT4G37330 CYP81D4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 6 4 8 17 60.00% 68.00% 10 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.849027'
Avg. expression score for this sample: '15.9732'
Avg. expression score in LCM sample: '12.067'
Tissue used: 'full endosperm'
AT4G37330 CYP81D4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.5159 x 10-1 8 8 0 9 50.00% 100.00% 16 9 TAIR8 Avg. embryo expression (dissected): '26.2841'
Avg. embryo expression (LCM): '14.7312'
AT4G37330 CYP81D4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37330 CYP81D4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 11 7 61.11% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37330 CYP81D4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37320 CYP81D5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.00043 x 10-1 522 1 99.81% 523 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37320 CYP81D5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.2 x 10-5 56 1 1 0 98.25% 0.00% 57 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.2e-22'
Avg. expression score for this sample: '15.5383'
Avg. expression score in LCM sample: '2.61623'
Tissue used: 'pure endosperm, no chalazal'
AT4G37320 CYP81D5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.8 x 10-18 138 0 0 15 100.00% 100.00% 138 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '8.2e-22'
Avg. expression score for this sample: '28.2994'
Avg. expression score in LCM sample: '2.61623'
Tissue used: 'full endosperm'
AT4G37320 CYP81D5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.26195 x 10-1 10 2 1 0 83.33% 0.00% 12 1 TAIR8 Avg. embryo expression (dissected): '4.77419'
Avg. embryo expression (LCM): '.740956'
AT4G37320 CYP81D5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37320 CYP81D5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37310 CYP81H1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.0534 x 10-1 2519 9 99.64% 2528 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37310 CYP81H1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 462 0 1 73 100.00% 98.65% 462 74 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '162.585'
Avg. expression score in LCM sample: '2.33697'
Tissue used: 'pure endosperm, no chalazal'
AT4G37310 CYP81H1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 1361 5 1 449 99.63% 99.78% 1366 450 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '452.875'
Avg. expression score in LCM sample: '2.33697'
Tissue used: 'full endosperm'
AT4G37310 CYP81H1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.72 x 10-4 25 0 2 3 100.00% 60.00% 25 5 TAIR8 Avg. embryo expression (dissected): '11.98'
Avg. embryo expression (LCM): '.665605'
AT4G37310 CYP81H1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 227 0 100.00% 227 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37310 CYP81H1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.04689 x 10-1 433 0 100.00% 433 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37300 MEE59 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.7 x 10-14 281 56 83.38% 337 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37300 MEE59 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.8261 x 10-2 670 642 382 1162 51.07% 75.26% 1312 1544 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002307'
Avg. expression score for this sample: '1014.92'
Avg. expression score in LCM sample: '311.949'
Tissue used: 'pure endosperm, no chalazal'
AT4G37300 MEE59 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9866 x 10-2 622 454 258 592 57.81% 69.65% 1076 850 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.002307'
Avg. expression score for this sample: '434.498'
Avg. expression score in LCM sample: '311.949'
Tissue used: 'full endosperm'
AT4G37300 MEE59 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.9 x 10-12 464 1053 159 316 30.59% 66.53% 1517 475 TAIR8 Avg. embryo expression (dissected): '1079.86'
Avg. embryo expression (LCM): '489.86'
AT4G37300 MEE59 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.8 x 10-16 324 66 83.08% 390 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37300 MEE59 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.6 x 10-9 100 12 89.29% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37295 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37295 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.470485'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G37295 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 3 0 0 0 100.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.995933'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G37295 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G37295 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G37295 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'