| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G455085 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 2 | 0 | 1 | 50.00% | 100.00% | 4 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G455085 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 2 | 0.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G455075 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.32 x 10-4 | 12 | 0 | 26 | 5 | 100.00% | 16.13% | 12 | 31 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0001621' Biased in favor of strain: 'B73' |
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| GRMZM2G455075 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 1 | 0 | 100.00% | 0.00% | 8 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.045501' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G454952 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.2447 x 10-3 | 316 | 252 | 333 | 248 | 55.63% | 42.69% | 568 | 581 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0072447' χ2 p-value for Mo17 x B73: '.0004213' Biased in favor of strain: 'B73' |
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| GRMZM2G454952 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.23823 x 10-2 | 133 | 86 | 78 | 230 | 60.73% | 74.68% | 219 | 308 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0623823' χ2 p-value for Mo17 x B73: '.002868' Biased in favor of strain: '' |
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| GRMZM2G454928 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 87 | 87 | 75 | 107 | 50.00% | 58.79% | 174 | 182 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0176922' Biased in favor of strain: '' |
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| GRMZM2G454928 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.325641 x 10-1 | 22 | 13 | 5 | 14 | 62.86% | 73.68% | 35 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6325641' χ2 p-value for Mo17 x B73: '.5164124' Biased in favor of strain: '' |
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| GRMZM2G454889 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.5563 x 10-3 | 13 | 2 | 17 | 4 | 86.67% | 19.05% | 15 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0045087' χ2 p-value for Mo17 x B73: '.0045563' Biased in favor of strain: 'B73' |
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| GRMZM2G454889 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 5 | 1 | 16.67% | 0 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G454797 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.83 x 10-5 | 4 | 30 | 8 | 35 | 11.76% | 81.40% | 34 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.24e-06' χ2 p-value for Mo17 x B73: '.0000383' Biased in favor of strain: 'Mo17' |
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| GRMZM2G454797 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 11 | 0.00% | 100.00% | 2 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0454988' χ2 p-value for Mo17 x B73: '.0190165' Biased in favor of strain: '' |
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| GRMZM2G454594 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.89602 x 10-2 | 52 | 32 | 43 | 29 | 61.90% | 40.28% | 84 | 72 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0290963' χ2 p-value for Mo17 x B73: '.0989602' Biased in favor of strain: '' |
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| GRMZM2G454594 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 1 | 20 | 16 | 85.71% | 44.44% | 7 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2850535' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G454514 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 2 | 6 | 1 | 77.78% | 14.29% | 9 | 7 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0955807' χ2 p-value for Mo17 x B73: '.0587817' Biased in favor of strain: '' |
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| GRMZM2G454514 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G454334 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.630246 x 10-1 | 12 | 55 | 21 | 23 | 17.91% | 52.27% | 67 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.49e-07' χ2 p-value for Mo17 x B73: '.7630246' Biased in favor of strain: '' |
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| GRMZM2G454334 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G454306 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.86029 x 10-2 | 19 | 7 | 14 | 2 | 73.08% | 12.50% | 26 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0186029' χ2 p-value for Mo17 x B73: '.0026998' Biased in favor of strain: 'B73' |
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| GRMZM2G454306 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.305732 x 10-1 | 12 | 2 | 9 | 3 | 85.71% | 25.00% | 14 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1305732' χ2 p-value for Mo17 x B73: '.0021996' Biased in favor of strain: '' |
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| GRMZM2G454176 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.96158 x 10-2 | 54 | 28 | 34 | 21 | 65.85% | 38.18% | 82 | 55 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0040889' χ2 p-value for Mo17 x B73: '.0796158' Biased in favor of strain: '' |
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| GRMZM2G454176 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.55169 x 10-2 | 54 | 9 | 23 | 29 | 85.71% | 55.77% | 63 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0013408' χ2 p-value for Mo17 x B73: '.0955169' Biased in favor of strain: '' |
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| GRMZM2G454081 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.94294 x 10-2 | 223 | 126 | 171 | 141 | 63.90% | 45.19% | 349 | 312 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.08e-07' χ2 p-value for Mo17 x B73: '.0894294' Biased in favor of strain: '' |
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| GRMZM2G454081 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.1592 x 10-3 | 204 | 61 | 115 | 168 | 76.98% | 59.36% | 265 | 283 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0003683' χ2 p-value for Mo17 x B73: '.0091592' Biased in favor of strain: 'B73' |
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| GRMZM2G454039 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 17 | 13 | 27 | 27 | 56.67% | 50.00% | 30 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4652088' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G454039 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.53478 x 10-2 | 10 | 0 | 11 | 3 | 100.00% | 21.43% | 10 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253478' χ2 p-value for Mo17 x B73: '.0003298' Biased in favor of strain: '' |
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| GRMZM2G454022 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 5 | 8 | 2 | 0.00% | 20.00% | 5 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0253473' χ2 p-value for Mo17 x B73: '.0577796' Biased in favor of strain: '' |
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| GRMZM2G454022 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G453879 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.935933 x 10-1 | 94 | 77 | 84 | 54 | 54.97% | 39.13% | 171 | 138 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1935933' χ2 p-value for Mo17 x B73: '.0106564' Biased in favor of strain: '' |
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| GRMZM2G453879 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.580048 x 10-1 | 17 | 12 | 7 | 31 | 58.62% | 81.58% | 29 | 38 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3580048' χ2 p-value for Mo17 x B73: '.0511721' Biased in favor of strain: '' |
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| GRMZM2G453855 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 10 | 0 | 5 | 0.00% | 100.00% | 10 | 5 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015654' χ2 p-value for Mo17 x B73: '.0253473' Biased in favor of strain: '' |
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| GRMZM2G453855 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 1 | 50.00% | 100.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170692' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G453832 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.907458 x 10-1 | 27 | 26 | 19 | 27 | 50.94% | 58.70% | 53 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8907458' χ2 p-value for Mo17 x B73: '.2381849' Biased in favor of strain: '' |
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| GRMZM2G453832 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.526549 x 10-1 | 38 | 20 | 28 | 31 | 65.52% | 52.54% | 58 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8526549' χ2 p-value for Mo17 x B73: '.0213669' Biased in favor of strain: '' |
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| GRMZM2G453794 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 2 | 5 | 3 | 66.67% | 37.50% | 6 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4142162' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G453794 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 3 | 100.00% | 0 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G453739 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 15 | 0 | 8 | 0 | 100.00% | 0.00% | 15 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001075' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G453739 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G453581 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 4 | 0 | 0 | 0.00% | 4 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455003' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G453581 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G453575 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 11 | 49 | 1 | 0 | 18.33% | 0.00% | 60 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.31e-07' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G453575 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 15 | 100.00% | 0 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G453565 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.03 x 10-14 | 513 | 231 | 383 | 201 | 68.95% | 34.42% | 744 | 584 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.71e-25' χ2 p-value for Mo17 x B73: '5.03e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G453565 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.716225 x 10-1 | 18 | 7 | 19 | 4 | 72.00% | 17.39% | 25 | 23 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5716225' χ2 p-value for Mo17 x B73: '5.36e-07' Biased in favor of strain: '' |
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| GRMZM2G453424 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.65 x 10-7 | 299 | 170 | 258 | 152 | 63.75% | 37.07% | 469 | 410 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.57e-09' χ2 p-value for Mo17 x B73: '1.65e-07' Biased in favor of strain: 'B73' |
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| GRMZM2G453424 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.8646 x 10-3 | 245 | 87 | 158 | 210 | 73.80% | 57.07% | 332 | 368 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0058646' χ2 p-value for Mo17 x B73: '.0000934' Biased in favor of strain: 'B73' |
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| GRMZM2G453388 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.230175 x 10-1 | 20 | 13 | 16 | 6 | 60.61% | 27.27% | 33 | 22 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2230175' χ2 p-value for Mo17 x B73: '.0330063' Biased in favor of strain: '' |
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| GRMZM2G453388 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999822 x 10-1 | 10 | 5 | 4 | 32 | 66.67% | 88.89% | 15 | 36 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9999822' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G453349 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.07 x 10-5 | 141 | 78 | 124 | 48 | 64.38% | 27.91% | 219 | 172 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000207' χ2 p-value for Mo17 x B73: '6.83e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G453349 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.13113 x 10-2 | 77 | 24 | 67 | 55 | 76.24% | 45.08% | 101 | 122 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0413113' χ2 p-value for Mo17 x B73: '4.25e-07' Biased in favor of strain: '' |
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| GRMZM2G453320 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 3 | 0 | 0 | 0 | 100.00% | 3 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G453320 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G453296 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 12 | 0 | 8 | 0.00% | 100.00% | 12 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000532' χ2 p-value for Mo17 x B73: '.0046777' Biased in favor of strain: '' |
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| GRMZM2G453296 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 3 | 0.00% | 100.00% | 1 | 3 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G453152 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 1 | 1 | 1 | 66.67% | 50.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5637029' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G453152 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4795016' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G453078 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 1 | 50.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G453078 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 0 | 6 | 25.00% | 100.00% | 4 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0770973' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G453008 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 0 | 1 | 0 | 100.00% | 0.00% | 6 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143059' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G453008 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 33 | 0 | 1 | 0 | 100.00% | 0.00% | 33 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000487' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G452935 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.52 x 10-27 | 883 | 357 | 686 | 338 | 71.21% | 33.01% | 1240 | 1024 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '1.52e-27' Biased in favor of strain: 'B73' |
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| GRMZM2G452935 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.06 x 10-12 | 491 | 84 | 156 | 139 | 85.39% | 47.12% | 575 | 295 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.66e-21' χ2 p-value for Mo17 x B73: '1.06e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G452717 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.072284 x 10-1 | 27 | 20 | 15 | 9 | 57.45% | 37.50% | 47 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3072284' χ2 p-value for Mo17 x B73: '.2206714' Biased in favor of strain: '' |
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| GRMZM2G452717 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 2 | 3 | 0 | 6 | 40.00% | 100.00% | 5 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2058979' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G452695 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.857506 x 10-1 | 8 | 21 | 25 | 18 | 27.59% | 41.86% | 29 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0157768' χ2 p-value for Mo17 x B73: '.2857506' Biased in favor of strain: '' |
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| GRMZM2G452695 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.20982 x 10-2 | 43 | 33 | 20 | 66 | 56.58% | 76.74% | 76 | 86 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0620982' χ2 p-value for Mo17 x B73: '.0474254' Biased in favor of strain: '' |
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| GRMZM2G452671 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.795001 x 10-1 | 47 | 31 | 39 | 33 | 60.26% | 45.83% | 78 | 72 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0700413' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G452671 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.0527 x 10-3 | 51 | 6 | 23 | 20 | 89.47% | 46.51% | 57 | 43 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002595' χ2 p-value for Mo17 x B73: '.0050527' Biased in favor of strain: 'B73' |
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| GRMZM2G452630 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.139795 x 10-1 | 472 | 403 | 521 | 489 | 53.94% | 48.42% | 875 | 1010 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0196678' χ2 p-value for Mo17 x B73: '.3139795' Biased in favor of strain: '' |
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| GRMZM2G452630 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.178238 x 10-1 | 496 | 255 | 499 | 683 | 66.05% | 57.78% | 751 | 1182 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7178238' χ2 p-value for Mo17 x B73: '9.25e-11' Biased in favor of strain: '' |
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| GRMZM2G452580 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 890 | 279 | 723 | 266 | 76.13% | 26.90% | 1169 | 989 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G452580 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2047 | 398 | 1108 | 817 | 83.72% | 42.44% | 2445 | 1925 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G452564 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.129237 x 10-1 | 525 | 142 | 170 | 142 | 78.71% | 45.51% | 667 | 312 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '.1129237' Biased in favor of strain: '' |
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| GRMZM2G452564 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.53 x 10-20 | 1401 | 424 | 1038 | 960 | 76.77% | 48.05% | 1825 | 1998 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.53e-20' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G452529 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 4 | 3 | 9 | 50.00% | 75.00% | 8 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G452529 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G452523 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.496918 x 10-1 | 19 | 14 | 12 | 16 | 57.58% | 57.14% | 33 | 28 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3840882' χ2 p-value for Mo17 x B73: '.4496918' Biased in favor of strain: '' |
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| GRMZM2G452523 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.790995 x 10-1 | 13 | 13 | 10 | 16 | 50.00% | 61.54% | 26 | 26 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0714187' χ2 p-value for Mo17 x B73: '.5790995' Biased in favor of strain: '' |
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| GRMZM2G452178 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.824224 x 10-1 | 96 | 145 | 174 | 150 | 39.83% | 46.30% | 241 | 324 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0015975' χ2 p-value for Mo17 x B73: '.1824224' Biased in favor of strain: '' |
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| GRMZM2G452178 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G452142 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.5288 x 10-3 | 30 | 13 | 32 | 12 | 69.77% | 27.27% | 43 | 44 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0095288' χ2 p-value for Mo17 x B73: '.0025688' Biased in favor of strain: 'B73' |
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| GRMZM2G452142 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.649876 x 10-1 | 15 | 9 | 8 | 11 | 62.50% | 57.89% | 24 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6649876' χ2 p-value for Mo17 x B73: '.417304' Biased in favor of strain: '' |
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| GRMZM2G452084 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G452084 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 9 | 100.00% | 0 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G452026 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.474342 x 10-1 | 149 | 157 | 140 | 109 | 48.69% | 43.78% | 306 | 249 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6474342' χ2 p-value for Mo17 x B73: '.0494669' Biased in favor of strain: '' |
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| GRMZM2G452026 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.48 x 10-10 | 77 | 0 | 52 | 4 | 100.00% | 7.14% | 77 | 56 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.48e-10' χ2 p-value for Mo17 x B73: '3.42e-21' Biased in favor of strain: 'B73' |
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| GRMZM2G451975 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.616799 x 10-1 | 26 | 19 | 22 | 25 | 57.78% | 53.19% | 45 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2967175' χ2 p-value for Mo17 x B73: '.6616799' Biased in favor of strain: '' |
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| GRMZM2G451975 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.698258 x 10-1 | 8 | 3 | 5 | 7 | 72.73% | 58.33% | 11 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6698258' χ2 p-value for Mo17 x B73: '.5402912' Biased in favor of strain: '' |
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| GRMZM2G451965 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.59 x 10-12 | 287 | 115 | 225 | 98 | 71.39% | 30.34% | 402 | 323 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.61e-18' χ2 p-value for Mo17 x B73: '1.59e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G451965 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 2354 | 607 | 1097 | 862 | 79.50% | 44.00% | 2961 | 1959 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G451792 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.69447 x 10-2 | 36 | 21 | 35 | 17 | 63.16% | 32.69% | 57 | 52 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0469447' χ2 p-value for Mo17 x B73: '.0125549' Biased in favor of strain: 'B73' |
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| GRMZM2G451792 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.985351 x 10-1 | 72 | 15 | 11 | 19 | 82.76% | 63.33% | 87 | 30 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0014527' χ2 p-value for Mo17 x B73: '.6985351' Biased in favor of strain: '' |
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| GRMZM2G451771 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.5654 x 10-3 | 0 | 15 | 0 | 10 | 0.00% | 100.00% | 15 | 10 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001075' χ2 p-value for Mo17 x B73: '.0015654' Biased in favor of strain: 'Mo17' |
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| GRMZM2G451771 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G451769 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.657123 x 10-1 | 24 | 32 | 7 | 4 | 42.86% | 36.36% | 56 | 11 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '.3657123' Biased in favor of strain: '' |
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| GRMZM2G451769 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 13 | 2 | 100.00% | 13.33% | 7 | 15 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.0000118' Biased in favor of strain: '' |
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| GRMZM2G451716 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.210837 x 10-1 | 460 | 457 | 381 | 516 | 50.16% | 57.53% | 917 | 897 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9210837' χ2 p-value for Mo17 x B73: '6.56e-06' Biased in favor of strain: '' |
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| GRMZM2G451716 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.407792 x 10-1 | 352 | 148 | 189 | 411 | 70.40% | 68.50% | 500 | 600 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.076598' χ2 p-value for Mo17 x B73: '.3407792' Biased in favor of strain: '' |
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| GRMZM2G451672 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.649 x 10-3 | 333 | 250 | 243 | 183 | 57.12% | 42.96% | 583 | 426 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0005871' χ2 p-value for Mo17 x B73: '.003649' Biased in favor of strain: 'B73' |
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| GRMZM2G451672 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.386225 x 10-1 | 186 | 84 | 207 | 164 | 68.89% | 44.20% | 270 | 371 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4386225' χ2 p-value for Mo17 x B73: '4.40e-20' Biased in favor of strain: '' |