| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT4G38380 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.65794 x 10-1 | 20 | 12 | 3 | 6 | 62.50% | 66.67% | 32 | 9 | TAIR8 |
Avg. embryo expression (dissected): '91.9283' Avg. embryo expression (LCM): '57.242' |
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| AT4G38380 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.15012 x 10-1 | 5 | 0 | 100.00% | 5 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38380 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.18421 x 10-1 | 99 | 33 | 75.00% | 132 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38380 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 5.68633 x 10-1 | 48 | 25 | 65.75% | 73 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38370 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.61273 x 10-1 | 46 | 17 | 21 | 19 | 73.02% | 47.50% | 63 | 40 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.404628' Avg. expression score for this sample: '341.899' Avg. expression score in LCM sample: '210.415' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38370 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.52376 x 10-1 | 22 | 13 | 25 | 38 | 62.86% | 60.32% | 35 | 63 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.404628' Avg. expression score for this sample: '202.05' Avg. expression score in LCM sample: '210.415' Tissue used: 'full endosperm' |
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| AT4G38370 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.45921 x 10-1 | 79 | 38 | 29 | 15 | 67.52% | 34.09% | 117 | 44 | TAIR8 |
Avg. embryo expression (dissected): '926.615' Avg. embryo expression (LCM): '708.567' |
||||
| AT4G38370 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.89581 x 10-1 | 11 | 5 | 68.75% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38370 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.38379 x 10-1 | 30 | 16 | 65.22% | 46 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38370 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.3 x 10-5 | 163 | 36 | 81.91% | 199 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38360 | LAZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '104.809' Avg. expression score in LCM sample: '69.7269' Tissue used: 'pure endosperm, no chalazal' |
||||||
| AT4G38360 | LAZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '140.119' Avg. expression score in LCM sample: '69.7269' Tissue used: 'full endosperm' |
||||||
| AT4G38360 | LAZ1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '61.2846' Avg. embryo expression (LCM): '60.2435' |
|||||
| AT4G38360 | LAZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38360 | LAZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38360 | LAZ1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 10 | 5 | 3 | 6 | 66.67% | 66.67% | 15 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.083661' Avg. expression score for this sample: '47.3452' Avg. expression score in LCM sample: '49.238' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 4.2855 x 10-2 | 29 | 7 | 7 | 31 | 80.56% | 81.58% | 36 | 38 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.083661' Avg. expression score for this sample: '72.2119' Avg. expression score in LCM sample: '49.238' Tissue used: 'full endosperm' |
|||||
| AT4G38350 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 14 | 14 | 3 | 2 | 50.00% | 40.00% | 28 | 5 | TAIR8 |
Avg. embryo expression (dissected): '101.544' Avg. embryo expression (LCM): '79.7846' |
||||
| AT4G38350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.72756 x 10-1 | 8 | 4 | 66.67% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 4.3418 x 10-2 | 25 | 1 | 96.15% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38350 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.3244 x 10-2 | 30 | 2 | 93.75% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38340 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 0 | 1 | 1 | 0 | 0.00% | 0.00% | 1 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.4' Avg. expression score for this sample: '1.56612' Avg. expression score in LCM sample: '.63201' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38340 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.4' Avg. expression score for this sample: '3.09858' Avg. expression score in LCM sample: '.63201' Tissue used: 'full endosperm' |
||||||
| AT4G38340 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 1 | 0 | 0 | 1 | 100.00% | 100.00% | 1 | 1 | TAIR8 |
Avg. embryo expression (dissected): '2.23327' Avg. embryo expression (LCM): '.540019' |
||||
| AT4G38340 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G38340 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.25 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38340 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G38330 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.44598 x 10-1 | 21 | 11 | 7 | 21 | 65.62% | 75.00% | 32 | 28 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.032352' Avg. expression score for this sample: '75.1701' Avg. expression score in LCM sample: '6.98151' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38330 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.907 x 10-2 | 76 | 6 | 21 | 29 | 92.68% | 58.00% | 82 | 50 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.032352' Avg. expression score for this sample: '74.5174' Avg. expression score in LCM sample: '6.98151' Tissue used: 'full endosperm' |
|||||
| AT4G38330 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 7.2282 x 10-2 | 33 | 18 | 3 | 10 | 64.71% | 76.92% | 51 | 13 | TAIR8 |
Avg. embryo expression (dissected): '137.789' Avg. embryo expression (LCM): '79.4832' |
||||
| AT4G38330 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 2.02747 x 10-1 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38330 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.376 x 10-2 | 24 | 1 | 96.00% | 25 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38330 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.77 x 10-4 | 63 | 3 | 95.45% | 66 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38320 | HHP5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '151.667' Avg. expression score in LCM sample: '95.7275' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38320 | HHP5 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '125.952' Avg. expression score in LCM sample: '95.7275' Tissue used: 'full endosperm' |
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| AT4G38320 | HHP5 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '146.033' Avg. embryo expression (LCM): '81.794' |
|||||
| AT4G38320 | HHP5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38320 | HHP5 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38320 | HHP5 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38310 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '4.05662' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38310 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '2.42276' Avg. expression score in LCM sample: '4.05662' Tissue used: 'full endosperm' |
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| AT4G38310 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '3.66044' Avg. embryo expression (LCM): '3.46617' |
||||||
| AT4G38310 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G38310 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G38310 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G38300 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '5.28984' Avg. expression score in LCM sample: '1.76375' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38300 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '3.45036' Avg. expression score in LCM sample: '1.76375' Tissue used: 'full endosperm' |
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| AT4G38300 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 1 | 0 | 0 | 0.00% | 1 | 0 | TAIR8 |
Avg. embryo expression (dissected): '34.8832' Avg. embryo expression (LCM): '31.7355' |
|||||
| AT4G38300 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G38300 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38300 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G38290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '168.367' Avg. expression score in LCM sample: '22.6642' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 1 | 1 | 50.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '202.907' Avg. expression score in LCM sample: '22.6642' Tissue used: 'full endosperm' |
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| AT4G38290 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '149.393' Avg. embryo expression (LCM): '71.923' |
||||||
| AT4G38290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G38290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 2 | 0.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38290 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.4 | 3 | 0 | 100.00% | 3 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38280 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '377.503' Avg. expression score in LCM sample: '61.8929' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38280 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '385.053' Avg. expression score in LCM sample: '61.8929' Tissue used: 'full endosperm' |
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| AT4G38280 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '394.29' Avg. embryo expression (LCM): '261.08' |
||||||
| AT4G38280 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G38280 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G38280 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT4G38270 | GAUT3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.93923 x 10-1 | 44 | 17 | 15 | 38 | 72.13% | 71.70% | 61 | 53 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.004981' Avg. expression score for this sample: '79.3685' Avg. expression score in LCM sample: '19.0044' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38270 | GAUT3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.502 x 10-3 | 72 | 20 | 17 | 80 | 78.26% | 82.47% | 92 | 97 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.004981' Avg. expression score for this sample: '94.3681' Avg. expression score in LCM sample: '19.0044' Tissue used: 'full endosperm' |
||||
| AT4G38270 | GAUT3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.00186 x 10-1 | 32 | 27 | 11 | 21 | 54.24% | 65.62% | 59 | 32 | TAIR8 |
Avg. embryo expression (dissected): '94.804' Avg. embryo expression (LCM): '58.7867' |
|||
| AT4G38270 | GAUT3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.39924 x 10-1 | 9 | 3 | 75.00% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G38270 | GAUT3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.93468 x 10-1 | 103 | 21 | 83.06% | 124 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G38270 | GAUT3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 6.7 x 10-8 | 242 | 17 | 93.44% | 259 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G38260 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 6.5904 x 10-2 | 51 | 11 | 12 | 33 | 82.26% | 73.33% | 62 | 45 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.008826' Avg. expression score for this sample: '103.24' Avg. expression score in LCM sample: '63.8183' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38260 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 6.3581 x 10-2 | 113 | 25 | 47 | 95 | 81.88% | 66.90% | 138 | 142 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.008826' Avg. expression score for this sample: '131.929' Avg. expression score in LCM sample: '63.8183' Tissue used: 'full endosperm' |
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| AT4G38260 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 2.85917 x 10-1 | 34 | 16 | 9 | 5 | 68.00% | 35.71% | 50 | 14 | TAIR8 |
Avg. embryo expression (dissected): '94.5225' Avg. embryo expression (LCM): '77.185' |
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| AT4G38260 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.0902 x 10-1 | 34 | 9 | 79.07% | 43 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38260 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.76612 x 10-1 | 182 | 49 | 78.79% | 231 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38260 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.5 x 10-7 | 237 | 23 | 91.15% | 260 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38250 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 3.6471 x 10-2 | 165 | 58 | 47 | 128 | 73.99% | 73.14% | 223 | 175 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '3.2e-07' Avg. expression score for this sample: '362.552' Avg. expression score in LCM sample: '201.141' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38250 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.2 x 10-6 | 226 | 70 | 57 | 256 | 76.35% | 81.79% | 296 | 313 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '3.2e-07' Avg. expression score for this sample: '463.857' Avg. expression score in LCM sample: '201.141' Tissue used: 'full endosperm' |
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| AT4G38250 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 6.20452 x 10-1 | 79 | 80 | 16 | 29 | 49.69% | 64.44% | 159 | 45 | TAIR8 |
Avg. embryo expression (dissected): '238.416' Avg. embryo expression (LCM): '169.604' |
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| AT4G38250 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 3.5 x 10-5 | 168 | 19 | 89.84% | 187 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38250 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.4233 x 10-2 | 329 | 75 | 81.44% | 404 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38250 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.7 x 10-12 | 351 | 28 | 92.61% | 379 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38240 | CGL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.40508 x 10-1 | 24 | 7 | 10 | 16 | 77.42% | 61.54% | 31 | 26 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.68463' Avg. expression score for this sample: '66.2261' Avg. expression score in LCM sample: '32.7764' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38240 | CGL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 8.14121 x 10-1 | 48 | 27 | 25 | 65 | 64.00% | 72.22% | 75 | 90 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.68463' Avg. expression score for this sample: '123.658' Avg. expression score in LCM sample: '32.7764' Tissue used: 'full endosperm' |
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| AT4G38240 | CGL1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 23 | 22 | 1 | 2 | 51.11% | 66.67% | 45 | 3 | TAIR8 |
Avg. embryo expression (dissected): '64.6949' Avg. embryo expression (LCM): '74.2086' |
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| AT4G38240 | CGL1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.64797 x 10-1 | 20 | 4 | 83.33% | 24 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G38240 | CGL1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.7 x 10-5 | 69 | 6 | 92.00% | 75 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G38240 | CGL1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.9 x 10-5 | 74 | 7 | 91.36% | 81 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G38230 | CPK26 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.41866 x 10-1 | 31 | 11 | 5 | 24 | 73.81% | 82.76% | 42 | 29 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.043125' Avg. expression score for this sample: '29.0009' Avg. expression score in LCM sample: '12.3169' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38230 | CPK26 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.59833 x 10-1 | 52 | 15 | 15 | 42 | 77.61% | 73.68% | 67 | 57 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.043125' Avg. expression score for this sample: '36.0648' Avg. expression score in LCM sample: '12.3169' Tissue used: 'full endosperm' |
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| AT4G38230 | CPK26 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.27243 x 10-1 | 13 | 14 | 5 | 10 | 48.15% | 66.67% | 27 | 15 | TAIR8 |
Avg. embryo expression (dissected): '26.5664' Avg. embryo expression (LCM): '7.72353' |
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| AT4G38230 | CPK26 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.29681 x 10-1 | 15 | 1 | 93.75% | 16 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G38230 | CPK26 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.01566 x 10-1 | 55 | 11 | 83.33% | 66 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G38230 | CPK26 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.465 x 10-3 | 90 | 9 | 90.91% | 99 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT4G38225 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 7.66355 x 10-1 | 10 | 6 | 1 | 10 | 62.50% | 90.91% | 16 | 11 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.423585' Avg. expression score for this sample: '60.5305' Avg. expression score in LCM sample: '39.3463' Tissue used: 'pure endosperm, no chalazal' |
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| AT4G38225 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 5.89585 x 10-1 | 8 | 5 | 3 | 18 | 61.54% | 85.71% | 13 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.423585' Avg. expression score for this sample: '61.0406' Avg. expression score in LCM sample: '39.3463' Tissue used: 'full endosperm' |
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| AT4G38225 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 8.05707 x 10-1 | 9 | 12 | 6 | 6 | 42.86% | 50.00% | 21 | 12 | TAIR8 |
Avg. embryo expression (dissected): '149.132' Avg. embryo expression (LCM): '82.0703' |
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| AT4G38225 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.46493 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38225 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 7.94642 x 10-1 | 19 | 7 | 73.08% | 26 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT4G38225 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.83185 x 10-1 | 30 | 4 | 88.24% | 34 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |