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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G38530 PLC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38530 PLC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 2 2 3 71.43% 60.00% 7 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '98.2051'
Avg. expression score in LCM sample: '32.5265'
Tissue used: 'pure endosperm, no chalazal'
AT4G38520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 5 3 12 61.54% 80.00% 13 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '45.532'
Avg. expression score in LCM sample: '32.5265'
Tissue used: 'full endosperm'
AT4G38520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.7337 x 10-1 1 6 5 3 14.29% 37.50% 7 8 TAIR8 Avg. embryo expression (dissected): '105.051'
Avg. embryo expression (LCM): '92.2302'
AT4G38520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.75189 x 10-1 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.16749 x 10-1 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1327 x 10-2 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38510 VAB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.82881 x 10-1 103 32 36 49 76.30% 57.65% 135 85 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085859'
Avg. expression score for this sample: '136.287'
Avg. expression score in LCM sample: '107.78'
Tissue used: 'pure endosperm, no chalazal'
AT4G38510 VAB2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.7573 x 10-2 162 38 72 130 81.00% 64.36% 200 202 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085859'
Avg. expression score for this sample: '130.58'
Avg. expression score in LCM sample: '107.78'
Tissue used: 'full endosperm'
AT4G38510 VAB2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.06177 x 10-1 59 41 11 13 59.00% 54.17% 100 24 TAIR8 Avg. embryo expression (dissected): '120.325'
Avg. embryo expression (LCM): '109.825'
AT4G38510 VAB2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.66924 x 10-1 42 21 66.67% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38510 VAB2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7605 x 10-2 450 236 65.60% 686 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38510 VAB2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-25 657 51 92.80% 708 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.07985 x 10-1 11 1 3 2 91.67% 40.00% 12 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.875127'
Avg. expression score for this sample: '96.2073'
Avg. expression score in LCM sample: '81.5587'
Tissue used: 'pure endosperm, no chalazal'
AT4G38500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 36 5 20 14 87.80% 41.18% 41 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.875127'
Avg. expression score for this sample: '147.29'
Avg. expression score in LCM sample: '81.5587'
Tissue used: 'full endosperm'
AT4G38500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 7 3 5 2 70.00% 28.57% 10 7 TAIR8 Avg. embryo expression (dissected): '121.779'
Avg. embryo expression (LCM): '123.112'
AT4G38500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.6893 x 10-1 5 4 55.56% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.88329 x 10-1 27 8 77.14% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.7 x 10-8 78 1 98.73% 79 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38495 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '261.622'
Avg. expression score in LCM sample: '140.292'
Tissue used: 'pure endosperm, no chalazal'
AT4G38495 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '345.659'
Avg. expression score in LCM sample: '140.292'
Tissue used: 'full endosperm'
AT4G38495 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '456.636'
Avg. embryo expression (LCM): '416.719'
AT4G38495 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38495 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38495 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.27669 x 10-1 28 14 13 17 66.67% 56.67% 42 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.591991'
Avg. expression score for this sample: '137.903'
Avg. expression score in LCM sample: '38.6261'
Tissue used: 'pure endosperm, no chalazal'
AT4G38490 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.85699 x 10-1 43 14 29 33 75.44% 53.23% 57 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.591991'
Avg. expression score for this sample: '98.0902'
Avg. expression score in LCM sample: '38.6261'
Tissue used: 'full endosperm'
AT4G38490 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.91053 x 10-1 40 22 7 6 64.52% 46.15% 62 13 TAIR8 Avg. embryo expression (dissected): '173.832'
Avg. embryo expression (LCM): '166.753'
AT4G38490 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.11681 x 10-1 10 8 55.56% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38490 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.12263 x 10-1 32 15 68.09% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38490 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.8532 x 10-2 47 15 75.81% 62 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.25224 x 10-1 262 118 111 282 68.95% 71.76% 380 393 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.211893'
Avg. expression score for this sample: '253.161'
Avg. expression score in LCM sample: '50.8401'
Tissue used: 'pure endosperm, no chalazal'
AT4G38480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 93 67 60 161 58.12% 72.85% 160 221 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.211893'
Avg. expression score for this sample: '156.849'
Avg. expression score in LCM sample: '50.8401'
Tissue used: 'full endosperm'
AT4G38480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.6297 x 10-2 268 323 82 69 45.35% 45.70% 591 151 TAIR8 Avg. embryo expression (dissected): '349.19'
Avg. embryo expression (LCM): '101.097'
AT4G38480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.69293 x 10-1 14 10 58.33% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.789 x 10-2 61 13 82.43% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.4409 x 10-1 34 18 65.38% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38470 STY46 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.9935 x 10-1 17 0 4 5 100.00% 55.56% 17 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.028466'
Avg. expression score for this sample: '709.536'
Avg. expression score in LCM sample: '154.005'
Tissue used: 'pure endosperm, no chalazal'
AT4G38470 STY46 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.0868 x 10-2 35 6 7 18 85.37% 72.00% 41 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.028466'
Avg. expression score for this sample: '1048.6'
Avg. expression score in LCM sample: '154.005'
Tissue used: 'full endosperm'
AT4G38470 STY46 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.7337 x 10-1 10 2 2 1 83.33% 33.33% 12 3 TAIR8 Avg. embryo expression (dissected): '631.68'
Avg. embryo expression (LCM): '192.95'
AT4G38470 STY46 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.4982 x 10-2 3 4 42.86% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38470 STY46 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.519 x 10-2 17 10 62.96% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38470 STY46 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.2723 x 10-1 28 8 77.78% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38460 GGR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 33 23 6 22 58.93% 78.57% 56 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '333.901'
Avg. expression score in LCM sample: '139.16'
Tissue used: 'pure endosperm, no chalazal'
AT4G38460 GGR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.84514 x 10-1 35 18 20 46 66.04% 69.70% 53 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '208.805'
Avg. expression score in LCM sample: '139.16'
Tissue used: 'full endosperm'
AT4G38460 GGR embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.2533 x 10-1 15 21 1 4 41.67% 80.00% 36 5 TAIR8 Avg. embryo expression (dissected): '396.166'
Avg. embryo expression (LCM): '198.501'
AT4G38460 GGR endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.44921 x 10-1 22 12 64.71% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38460 GGR endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.17 x 10-4 45 4 91.84% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38460 GGR endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.25 x 10-4 31 2 93.94% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38440 IYO endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.10382 x 10-1 7 4 3 1 63.64% 25.00% 11 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.595538'
Avg. expression score for this sample: '43.5638'
Avg. expression score in LCM sample: '43.6822'
Tissue used: 'pure endosperm, no chalazal'
AT4G38440 IYO endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.11128 x 10-1 18 5 9 28 78.26% 75.68% 23 37 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.595538'
Avg. expression score for this sample: '55.3414'
Avg. expression score in LCM sample: '43.6822'
Tissue used: 'full endosperm'
AT4G38440 IYO embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.96004 x 10-1 9 5 0 3 64.29% 100.00% 14 3 TAIR8 Avg. embryo expression (dissected): '70.7073'
Avg. embryo expression (LCM): '71.923'
AT4G38440 IYO endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38440 IYO endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.03223 x 10-1 59 32 64.84% 91 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38440 IYO endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.87567 x 10-1 65 20 76.47% 85 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38430 ROPGEF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.55643 x 10-1 4 8 3 9 33.33% 75.00% 12 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.453114'
Avg. expression score for this sample: '534.88'
Avg. expression score in LCM sample: '120.302'
Tissue used: 'pure endosperm, no chalazal'
AT4G38430 ROPGEF1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.07921 x 10-1 9 8 6 14 52.94% 70.00% 17 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.453114'
Avg. expression score for this sample: '426.886'
Avg. expression score in LCM sample: '120.302'
Tissue used: 'full endosperm'
AT4G38430 ROPGEF1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.09509 x 10-1 4 24 4 8 14.29% 66.67% 28 12 TAIR8 Avg. embryo expression (dissected): '681.662'
Avg. embryo expression (LCM): '477.565'
AT4G38430 ROPGEF1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.12447 x 10-1 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38430 ROPGEF1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.53669 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38430 ROPGEF1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 1 66.67% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38420 sks9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.14109'
Avg. expression score in LCM sample: '.764292'
Tissue used: 'pure endosperm, no chalazal'
AT4G38420 sks9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 5 8 100.00% 61.54% 3 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '18.2677'
Avg. expression score in LCM sample: '.764292'
Tissue used: 'full endosperm'
AT4G38420 sks9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 1 0 50.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '8.8371'
Avg. embryo expression (LCM): '0'
AT4G38420 sks9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38420 sks9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.30019 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38420 sks9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.36 x 10-4 49 0 100.00% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.76471 x 10-1 3 0 1 5 100.00% 83.33% 3 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.547153'
Avg. expression score for this sample: '481.341'
Avg. expression score in LCM sample: '8.52479'
Tissue used: 'pure endosperm, no chalazal'
AT4G38410 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 1 4 10 80.00% 71.43% 5 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.547153'
Avg. expression score for this sample: '1191.3'
Avg. expression score in LCM sample: '8.52479'
Tissue used: 'full endosperm'
AT4G38410 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '21.1784'
Avg. embryo expression (LCM): '50.9627'
AT4G38410 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38410 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38410 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38405 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G38405 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G38405 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G38405 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38405 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38405 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38401 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G38401 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.70246'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G38401 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G38401 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38401 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38401 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38400 EXLA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.64361'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G38400 EXLA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9.94134'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G38400 EXLA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.84414'
Avg. embryo expression (LCM): '0'
AT4G38400 EXLA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38400 EXLA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38400 EXLA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38390 RHS17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.4'
Avg. expression score for this sample: '.134038'
Avg. expression score in LCM sample: '4.61515'
Tissue used: 'pure endosperm, no chalazal'
AT4G38390 RHS17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.4 0 3 0 0 0.00% 3 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.4'
Avg. expression score for this sample: '4.68563'
Avg. expression score in LCM sample: '4.61515'
Tissue used: 'full endosperm'
AT4G38390 RHS17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.778292'
Avg. embryo expression (LCM): '0'
AT4G38390 RHS17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38390 RHS17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38390 RHS17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.25 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 10 6 2 7 62.50% 77.78% 16 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.685003'
Avg. expression score for this sample: '26.1947'
Avg. expression score in LCM sample: '47.048'
Tissue used: 'pure endosperm, no chalazal'
AT4G38380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.84973 x 10-1 16 4 4 8 80.00% 66.67% 20 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.685003'
Avg. expression score for this sample: '18.8912'
Avg. expression score in LCM sample: '47.048'
Tissue used: 'full endosperm'