Displaying data sets 40101 - 40200 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G38850 SAUR15 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G38850 SAUR15 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38850 SAUR15 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38850 SAUR15 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G38840 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G38840 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.499692'
Avg. embryo expression (LCM): '0'
AT4G38840 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38840 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38840 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38830 CRK26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G38830 CRK26 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.430759'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G38830 CRK26 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G38830 CRK26 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38830 CRK26 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 2 33.33% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38830 CRK26 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38825 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G38825 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G38825 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G38825 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38825 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38825 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G38820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G38820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G38820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.36283 x 10-1 832 407 646 1287 67.15% 66.58% 1239 1933 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.329266'
Avg. expression score for this sample: '1077.89'
Avg. expression score in LCM sample: '279.187'
Tissue used: 'pure endosperm, no chalazal'
AT4G38810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.54736 x 10-1 2214 1114 531 1241 66.53% 70.03% 3328 1772 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.329266'
Avg. expression score for this sample: '1281.27'
Avg. expression score in LCM sample: '279.187'
Tissue used: 'full endosperm'
AT4G38810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.22696 x 10-1 58 45 23 40 56.31% 63.49% 103 63 TAIR8 Avg. embryo expression (dissected): '93.3104'
Avg. embryo expression (LCM): '32.5267'
AT4G38810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.5 x 10-10 1719 598 74.19% 2317 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 438 34 92.80% 472 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 701 30 95.90% 731 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38800 MTN1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '167.377'
Avg. expression score in LCM sample: '84.7776'
Tissue used: 'pure endosperm, no chalazal'
AT4G38800 MTN1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '194.229'
Avg. expression score in LCM sample: '84.7776'
Tissue used: 'full endosperm'
AT4G38800 MTN1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '155.998'
Avg. embryo expression (LCM): '103.633'
AT4G38800 MTN1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38800 MTN1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38800 MTN1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 5 1 9 28.57% 90.00% 7 10 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162139'
Avg. expression score for this sample: '78.5521'
Avg. expression score in LCM sample: '54.2941'
Tissue used: 'pure endosperm, no chalazal'
AT4G38790 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.8316 x 10-2 21 11 7 46 65.62% 86.79% 32 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.162139'
Avg. expression score for this sample: '160.518'
Avg. expression score in LCM sample: '54.2941'
Tissue used: 'full endosperm'
AT4G38790 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.95098 x 10-1 4 8 0 1 33.33% 100.00% 12 1 TAIR8 Avg. embryo expression (dissected): '104.213'
Avg. embryo expression (LCM): '62.2277'
AT4G38790 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.614 x 10-2 1 4 20.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38790 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.72383 x 10-1 138 50 73.40% 188 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38790 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.8238 x 10-2 88 13 87.13% 101 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38781 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '9.67123'
Tissue used: 'pure endosperm, no chalazal'
AT4G38781 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '3.38938'
Avg. expression score in LCM sample: '9.67123'
Tissue used: 'full endosperm'
AT4G38781 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G38781 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38781 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38781 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.7326 x 10-2 45 15 13 50 75.00% 79.37% 60 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000466'
Avg. expression score for this sample: '35.9682'
Avg. expression score in LCM sample: '44.4024'
Tissue used: 'pure endosperm, no chalazal'
AT4G38780 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.959 x 10-3 106 29 35 121 78.52% 77.56% 135 156 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000466'
Avg. expression score for this sample: '59.49'
Avg. expression score in LCM sample: '44.4024'
Tissue used: 'full endosperm'
AT4G38780 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 13 8 2 1 61.90% 33.33% 21 3 TAIR8 Avg. embryo expression (dissected): '6.99235'
Avg. embryo expression (LCM): '3.17732'
AT4G38780 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.32113 x 10-1 26 8 76.47% 34 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38780 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.45 x 10-4 544 264 67.33% 808 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38780 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 484 140 77.56% 624 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38770 PRP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 6 0.00% 85.71% 1 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.202758'
Avg. expression score for this sample: '2.49064'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G38770 PRP4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.46142 x 10-1 3 14 1 49 17.65% 98.00% 17 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.202758'
Avg. expression score for this sample: '11.3096'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G38770 PRP4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.44533 x 10-1 15 13 14 9 53.57% 39.13% 28 23 TAIR8 Avg. embryo expression (dissected): '34.7669'
Avg. embryo expression (LCM): '9.06729'
AT4G38770 PRP4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38770 PRP4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.212 x 10-3 48 1 97.96% 49 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38770 PRP4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.6 x 10-9 259 4 98.48% 263 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.5671 1 0 4 1 100.00% 20.00% 1 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.737428'
Avg. expression score for this sample: '10.184'
Avg. expression score in LCM sample: '15.8297'
Tissue used: 'pure endosperm, no chalazal'
AT4G38760 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 2 2 4 71.43% 66.67% 7 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.737428'
Avg. expression score for this sample: '13.8629'
Avg. expression score in LCM sample: '15.8297'
Tissue used: 'full endosperm'
AT4G38760 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.31222 x 10-1 7 1 0 1 87.50% 100.00% 8 1 TAIR8 Avg. embryo expression (dissected): '18.6396'
Avg. embryo expression (LCM): '14.2791'
AT4G38760 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38760 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.72727 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38760 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4013 x 10-2 11 0 100.00% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.6048 x 10-2 22 3 2 6 88.00% 75.00% 25 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '25.8173'
Avg. expression score in LCM sample: '25.545'
Tissue used: 'pure endosperm, no chalazal'
AT4G38750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.32394 x 10-1 34 3 31 14 91.89% 31.11% 37 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '39.1475'
Avg. expression score in LCM sample: '25.545'
Tissue used: 'full endosperm'
AT4G38750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.20978 x 10-1 20 11 7 6 64.52% 46.15% 31 13 TAIR8 Avg. embryo expression (dissected): '48.9963'
Avg. embryo expression (LCM): '42.8875'
AT4G38750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.58553 x 10-1 8 6 57.14% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.32455 x 10-1 24 9 72.73% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.8 x 10-6 91 8 91.92% 99 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38740 ROC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0002 222 413 140 600 34.96% 81.08% 635 740 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000345'
Avg. expression score for this sample: '7522.59'
Avg. expression score in LCM sample: '3283'
Tissue used: 'pure endosperm, no chalazal'
AT4G38740 ROC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.0325 x 10-2 747 1173 917 3096 38.91% 77.15% 1920 4013 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000345'
Avg. expression score for this sample: '8023.55'
Avg. expression score in LCM sample: '3283'
Tissue used: 'full endosperm'
AT4G38740 ROC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.6 x 10-15 559 1308 142 357 29.94% 71.54% 1867 499 TAIR8 Avg. embryo expression (dissected): '21376.7'
Avg. embryo expression (LCM): '14512.8'
AT4G38740 ROC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.4 x 10-16 334 70 82.67% 404 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38740 ROC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.4 x 10-5 150 42 78.12% 192 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38740 ROC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.0 x 10-7 326 283 53.53% 609 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 0 3 1 100.00% 25.00% 9 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177543'
Avg. expression score for this sample: '4.26313'
Avg. expression score in LCM sample: '8.06916'
Tissue used: 'pure endosperm, no chalazal'
AT4G38730 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.92122 x 10-1 16 2 5 15 88.89% 75.00% 18 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.177543'
Avg. expression score for this sample: '6.67444'
Avg. expression score in LCM sample: '8.06916'
Tissue used: 'full endosperm'
AT4G38730 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 5 0 2 1 100.00% 33.33% 5 3 TAIR8 Avg. embryo expression (dissected): '4.72421'
Avg. embryo expression (LCM): '9.48173'
AT4G38730 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.1 x 10-5 20 30 40.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.027 x 10-3 65 1 98.48% 66 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.03551 x 10-1 345 140 156 314 71.13% 66.81% 485 470 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.136265'
Avg. expression score for this sample: '724.866'
Avg. expression score in LCM sample: '222.644'
Tissue used: 'pure endosperm, no chalazal'
AT4G38710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.25037 x 10-1 429 147 178 288 74.48% 61.80% 576 466 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.136265'
Avg. expression score for this sample: '675.431'
Avg. expression score in LCM sample: '222.644'
Tissue used: 'full endosperm'
AT4G38710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.92141 x 10-1 371 314 139 130 54.16% 48.33% 685 269 TAIR8 Avg. embryo expression (dissected): '1098.55'
Avg. embryo expression (LCM): '985.597'
AT4G38710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.24 x 10-4 75 67 52.82% 142 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.15872 x 10-1 381 154 71.21% 535 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.3 x 10-28 1126 193 85.37% 1319 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.14198 x 10-1 67 24 26 70 73.63% 72.92% 91 96 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.38053'
Avg. expression score for this sample: '102.6'
Avg. expression score in LCM sample: '100.313'
Tissue used: 'pure endosperm, no chalazal'
AT4G38700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 12 17 42 106 41.38% 71.62% 29 148 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.38053'
Avg. expression score for this sample: '72.8869'
Avg. expression score in LCM sample: '100.313'
Tissue used: 'full endosperm'
AT4G38700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.52705 x 10-1 21 27 4 6 43.75% 60.00% 48 10 TAIR8 Avg. embryo expression (dissected): '41.7829'
Avg. embryo expression (LCM): '31.4844'
AT4G38700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.39162 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.505 x 10-3 10122 6235 61.88% 16357 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.83 x 10-3 2717 833 76.54% 3550 TAIR8 Mutant effect: 'N/A (not a MEG)'