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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G39030 EDS5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.90529 x 10-1 5 10 33.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39030 EDS5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0066 15 1 93.75% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.515851'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G39020 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G39020 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.47413'
Avg. embryo expression (LCM): '0'
AT4G39020 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39020 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39020 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39010 GH9B18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.76785 x 10-1 279 36 129 118 88.57% 47.77% 315 247 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.075607'
Avg. expression score for this sample: '126.771'
Avg. expression score in LCM sample: '127.71'
Tissue used: 'pure endosperm, no chalazal'
AT4G39010 GH9B18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.24327 x 10-1 123 16 53 49 88.49% 48.04% 139 102 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.075607'
Avg. expression score for this sample: '46.7477'
Avg. expression score in LCM sample: '127.71'
Tissue used: 'full endosperm'
AT4G39010 GH9B18 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.75015 x 10-1 43 17 22 10 71.67% 31.25% 60 32 TAIR8 Avg. embryo expression (dissected): '31.5222'
Avg. embryo expression (LCM): '18.5239'
AT4G39010 GH9B18 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.9 x 10-5 8 17 32.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39010 GH9B18 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0088 16 0 100.00% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39010 GH9B18 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 287 1 99.65% 288 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39000 GH9B17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G39000 GH9B17 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.584457'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G39000 GH9B17 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G39000 GH9B17 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39000 GH9B17 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 107 105 50.47% 212 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39000 GH9B17 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 325 111 74.54% 436 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.80347 x 10-1 37 14 27 35 72.55% 56.45% 51 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.53249'
Avg. expression score for this sample: '41.3685'
Avg. expression score in LCM sample: '22.4731'
Tissue used: 'pure endosperm, no chalazal'
AT4G38980 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.37911 x 10-1 66 22 67 95 75.00% 58.64% 88 162 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.53249'
Avg. expression score for this sample: '47.0907'
Avg. expression score in LCM sample: '22.4731'
Tissue used: 'full endosperm'
AT4G38980 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 32 33 6 6 49.23% 50.00% 65 12 TAIR8 Avg. embryo expression (dissected): '45.7031'
Avg. embryo expression (LCM): '41.7824'
AT4G38980 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.115 x 10-3 27 3 90.00% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38980 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 131 72 64.53% 203 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38980 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-5 161 36 81.73% 197 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38970 FBA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.96849 x 10-1 114 49 34 36 69.94% 51.43% 163 70 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.267948'
Avg. expression score for this sample: '1019.81'
Avg. expression score in LCM sample: '427.033'
Tissue used: 'pure endosperm, no chalazal'
AT4G38970 FBA2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.19307 x 10-1 290 91 197 227 76.12% 53.54% 381 424 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.267948'
Avg. expression score for this sample: '845.994'
Avg. expression score in LCM sample: '427.033'
Tissue used: 'full endosperm'
AT4G38970 FBA2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.4307 x 10-2 255 170 37 24 60.00% 39.34% 425 61 TAIR8 Avg. embryo expression (dissected): '2699.99'
Avg. embryo expression (LCM): '1528.48'
AT4G38970 FBA2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.3996 x 10-2 44 40 52.38% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38970 FBA2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 10 6 62.50% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38970 FBA2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.72977 x 10-1 40 18 68.97% 58 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38960 BBX19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.27385'
Avg. expression score in LCM sample: '5.71749'
Tissue used: 'pure endosperm, no chalazal'
AT4G38960 BBX19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '8.3973'
Avg. expression score in LCM sample: '5.71749'
Tissue used: 'full endosperm'
AT4G38960 BBX19 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '12.6943'
Avg. embryo expression (LCM): '13.4377'
AT4G38960 BBX19 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38960 BBX19 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38960 BBX19 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.63707 x 10-1 7 7 8 4 50.00% 33.33% 14 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004098'
Avg. expression score for this sample: '23.5057'
Avg. expression score in LCM sample: '12.067'
Tissue used: 'pure endosperm, no chalazal'
AT4G38950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9276 x 10-2 8 5 18 6 61.54% 25.00% 13 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004098'
Avg. expression score for this sample: '14.1604'
Avg. expression score in LCM sample: '12.067'
Tissue used: 'full endosperm'
AT4G38950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.0928 x 10-2 67 30 24 18 69.07% 42.86% 97 42 TAIR8 Avg. embryo expression (dissected): '153.505'
Avg. embryo expression (LCM): '122.182'
AT4G38950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.042 x 10-2 12 6 66.67% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.592 x 10-2 486 272 178 603 64.12% 77.21% 758 781 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-13'
Avg. expression score for this sample: '1021.77'
Avg. expression score in LCM sample: '224.54'
Tissue used: 'pure endosperm, no chalazal'
AT4G38940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.2 x 10-13 631 272 367 1370 69.88% 78.87% 903 1737 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-13'
Avg. expression score for this sample: '936.652'
Avg. expression score in LCM sample: '224.54'
Tissue used: 'full endosperm'
AT4G38940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.4496 x 10-2 165 233 31 30 41.46% 49.18% 398 61 TAIR8 Avg. embryo expression (dissected): '521.48'
Avg. embryo expression (LCM): '203.298'
AT4G38940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.7 x 10-9 198 22 90.00% 220 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.5 x 10-6 1029 491 67.70% 1520 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 8.64543 x 10-1 632 226 73.66% 858 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.43017 x 10-1 5 2 1 10 71.43% 90.91% 7 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.032478'
Avg. expression score for this sample: '125.764'
Avg. expression score in LCM sample: '57.9539'
Tissue used: 'pure endosperm, no chalazal'
AT4G38930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.4293 x 10-2 20 7 20 74 74.07% 78.72% 27 94 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.032478'
Avg. expression score for this sample: '201.062'
Avg. expression score in LCM sample: '57.9539'
Tissue used: 'full endosperm'
AT4G38930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 3 0 1 0.00% 100.00% 3 1 TAIR8 Avg. embryo expression (dissected): '114.449'
Avg. embryo expression (LCM): '67.427'
AT4G38930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.7096 x 10-1 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.95891 x 10-1 85 35 70.83% 120 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.47818 x 10-1 105 24 81.40% 129 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38920 VHA-C3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.79881 x 10-1 316 238 144 527 57.04% 78.54% 554 671 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-33'
Avg. expression score for this sample: '1835.54'
Avg. expression score in LCM sample: '1332.13'
Tissue used: 'pure endosperm, no chalazal'
AT4G38920 VHA-C3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 543 335 291 2168 61.85% 88.17% 878 2459 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.3e-33'
Avg. expression score for this sample: '2220.75'
Avg. expression score in LCM sample: '1332.13'
Tissue used: 'full endosperm'
AT4G38920 VHA-C3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.3 x 10-4 279 503 56 112 35.68% 66.67% 782 168 TAIR8 Avg. embryo expression (dissected): '2356.36'
Avg. embryo expression (LCM): '1257.09'
AT4G38920 VHA-C3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.2 x 10-7 292 34 89.57% 326 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38920 VHA-C3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.2 x 10-25 4341 709 85.96% 5050 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38920 VHA-C3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.7848 x 10-2 1974 502 79.73% 2476 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38910 BPC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 0 2 75.00% 100.00% 4 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '31.5945'
Avg. expression score in LCM sample: '14.9919'
Tissue used: 'pure endosperm, no chalazal'
AT4G38910 BPC5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 2 3 66.67% 60.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '58.1566'
Avg. expression score in LCM sample: '14.9919'
Tissue used: 'full endosperm'
AT4G38910 BPC5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 5 2 2 1 71.43% 33.33% 7 3 TAIR8 Avg. embryo expression (dissected): '29.0391'
Avg. embryo expression (LCM): '14.6433'
AT4G38910 BPC5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.54971 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38910 BPC5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38910 BPC5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.53589 x 10-1 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '312.315'
Avg. expression score in LCM sample: '130.885'
Tissue used: 'pure endosperm, no chalazal'
AT4G38900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '397.169'
Avg. expression score in LCM sample: '130.885'
Tissue used: 'full endosperm'
AT4G38900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '201.94'
Avg. embryo expression (LCM): '102.88'
AT4G38900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.4508 x 10-2 37 8 3 15 82.22% 83.33% 45 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009971'
Avg. expression score for this sample: '46.8961'
Avg. expression score in LCM sample: '33.379'
Tissue used: 'pure endosperm, no chalazal'
AT4G38890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.3585 x 10-2 43 11 21 64 79.63% 75.29% 54 85 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.009971'
Avg. expression score for this sample: '66.3708'
Avg. expression score in LCM sample: '33.379'
Tissue used: 'full endosperm'
AT4G38890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.31606 x 10-1 63 52 6 6 54.78% 50.00% 115 12 TAIR8 Avg. embryo expression (dissected): '136.393'
Avg. embryo expression (LCM): '184.209'
AT4G38890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.88488 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.85179 x 10-1 93 34 73.23% 127 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.09387 x 10-1 153 26 85.47% 179 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38880 ASE3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G38880 ASE3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.45633'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G38880 ASE3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.37424'
Avg. embryo expression (LCM): '0'
AT4G38880 ASE3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38880 ASE3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38880 ASE3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.810882'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G38870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.99111'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G38870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.453627'
Avg. embryo expression (LCM): '0'
AT4G38870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G38860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.211022'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G38860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G38860 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38860 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G38850 SAUR15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G38850 SAUR15 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.355458'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'