Displaying data sets 3901 - 4000 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G61880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '94.9981'
Avg. expression score in LCM sample: '53.7062'
Tissue used: 'pure endosperm, no chalazal'
AT5G61880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '104.787'
Avg. expression score in LCM sample: '53.7062'
Tissue used: 'full endosperm'
AT5G61880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '192.444'
Avg. embryo expression (LCM): '241.69'
AT5G61880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61865 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.14286 x 10-1 8 2 80.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61865 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 4 100.00% 0 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.090226'
Avg. expression score for this sample: '55.6371'
Avg. expression score in LCM sample: '17.8139'
Tissue used: 'pure endosperm, no chalazal'
AT5G61865 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.30769 x 10-1 1 0 0 6 100.00% 100.00% 1 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.090226'
Avg. expression score for this sample: '44.7375'
Avg. expression score in LCM sample: '17.8139'
Tissue used: 'full endosperm'
AT5G61865 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.82051 x 10-1 1 4 2 0 20.00% 0.00% 5 2 TAIR8 Avg. embryo expression (dissected): '65.2419'
Avg. embryo expression (LCM): '48.338'
AT5G61865 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61865 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61850 LFY endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61850 LFY endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.203504'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G61850 LFY endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.40308'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G61850 LFY embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.230414'
Avg. embryo expression (LCM): '1.99681'
AT5G61850 LFY endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61850 LFY endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61840 GUT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61840 GUT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '488.015'
Avg. expression score in LCM sample: '189.456'
Tissue used: 'pure endosperm, no chalazal'
AT5G61840 GUT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '514.426'
Avg. expression score in LCM sample: '189.456'
Tissue used: 'full endosperm'
AT5G61840 GUT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '395.53'
Avg. embryo expression (LCM): '268.038'
AT5G61840 GUT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61840 GUT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61835 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61835 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G61835 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G61835 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G61835 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61835 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '199.714'
Avg. expression score in LCM sample: '67.0372'
Tissue used: 'pure endosperm, no chalazal'
AT5G61830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '164.673'
Avg. expression score in LCM sample: '67.0372'
Tissue used: 'full endosperm'
AT5G61830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '229.419'
Avg. embryo expression (LCM): '152.386'
AT5G61830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 22 0 100.00% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '56.0472'
Avg. expression score in LCM sample: '12.2287'
Tissue used: 'pure endosperm, no chalazal'
AT5G61820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 3 100.00% 100.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '222.86'
Avg. expression score in LCM sample: '12.2287'
Tissue used: 'full endosperm'
AT5G61820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.25952'
Avg. embryo expression (LCM): '2.23543'
AT5G61820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61810 APC1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61810 APC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.11264'
Avg. expression score in LCM sample: '8.05446'
Tissue used: 'pure endosperm, no chalazal'
AT5G61810 APC1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.95377'
Avg. expression score in LCM sample: '8.05446'
Tissue used: 'full endosperm'
AT5G61810 APC1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '7.01572'
Avg. embryo expression (LCM): '15.8364'
AT5G61810 APC1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61810 APC1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61800 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '20.4603'
Avg. expression score in LCM sample: '1.88133'
Tissue used: 'pure endosperm, no chalazal'
AT5G61800 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14.7934'
Avg. expression score in LCM sample: '1.88133'
Tissue used: 'full endosperm'
AT5G61800 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '40.4395'
Avg. embryo expression (LCM): '32.0746'
AT5G61800 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61800 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61790 CNX1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2643 309 89.53% 2952 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61790 CNX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.0048 x 10-2 766 339 412 917 69.32% 69.00% 1105 1329 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-10'
Avg. expression score for this sample: '3799.62'
Avg. expression score in LCM sample: '4307.92'
Tissue used: 'pure endosperm, no chalazal'
AT5G61790 CNX1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.0 x 10-11 930 385 799 2306 70.72% 74.27% 1315 3105 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.1e-10'
Avg. expression score for this sample: '3574.43'
Avg. expression score in LCM sample: '4307.92'
Tissue used: 'full endosperm'
AT5G61790 CNX1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.49795 x 10-1 793 752 244 279 51.33% 53.35% 1545 523 TAIR8 Avg. embryo expression (dissected): '4555.95'
Avg. embryo expression (LCM): '3124.16'
AT5G61790 CNX1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.2623 x 10-2 382 124 75.49% 506 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61790 CNX1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.5 x 10-6 1852 565 76.62% 2417 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61780 Tudor2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.1 x 10-17 918 194 82.55% 1112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61780 Tudor2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.18885 x 10-1 250 155 118 391 61.73% 76.82% 405 509 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.023247'
Avg. expression score for this sample: '491.624'
Avg. expression score in LCM sample: '334.201'
Tissue used: 'pure endosperm, no chalazal'
AT5G61780 Tudor2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.01744 x 10-1 476 278 255 729 63.13% 74.09% 754 984 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.023247'
Avg. expression score for this sample: '713.807'
Avg. expression score in LCM sample: '334.201'
Tissue used: 'full endosperm'
AT5G61780 Tudor2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.16533 x 10-1 325 403 101 110 44.64% 52.13% 728 211 TAIR8 Avg. embryo expression (dissected): '740.599'
Avg. embryo expression (LCM): '430.809'
AT5G61780 Tudor2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.4686 x 10-1 157 63 71.36% 220 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61780 Tudor2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.28501 x 10-1 1080 450 70.59% 1530 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61770 PPAN endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.2 x 10-5 179 30 85.65% 209 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61770 PPAN endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.0638 x 10-2 23 11 28 12 67.65% 30.00% 34 40 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.921735'
Avg. expression score for this sample: '68.5543'
Avg. expression score in LCM sample: '23.0904'
Tissue used: 'pure endosperm, no chalazal'
AT5G61770 PPAN endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.735 x 10-2 68 13 24 56 83.95% 70.00% 81 80 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.921735'
Avg. expression score for this sample: '117.561'
Avg. expression score in LCM sample: '23.0904'
Tissue used: 'full endosperm'
AT5G61770 PPAN embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.81548 x 10-1 64 38 8 3 62.75% 27.27% 102 11 TAIR8 Avg. embryo expression (dissected): '140.711'
Avg. embryo expression (LCM): '353.185'
AT5G61770 PPAN endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.622 x 10-3 1 7 12.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61770 PPAN endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.8408 x 10-2 59 47 55.66% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61760 IPK2BETA endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.56 x 10-4 41 1 97.62% 42 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61760 IPK2BETA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 16 4 7 9 80.00% 56.25% 20 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.524102'
Avg. expression score for this sample: '51.1003'
Avg. expression score in LCM sample: '28.1906'
Tissue used: 'pure endosperm, no chalazal'
AT5G61760 IPK2BETA endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.75188 x 10-1 9 8 7 29 52.94% 80.56% 17 36 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.524102'
Avg. expression score for this sample: '42.4219'
Avg. expression score in LCM sample: '28.1906'
Tissue used: 'full endosperm'
AT5G61760 IPK2BETA embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 10 9 1 1 52.63% 50.00% 19 2 TAIR8 Avg. embryo expression (dissected): '35.5449'
Avg. embryo expression (LCM): '31.4216'
AT5G61760 IPK2BETA endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.3236 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61760 IPK2BETA endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.28196 x 10-1 15 2 88.24% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61750 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G61750 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.286279'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G61750 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G61750 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61750 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61740 ABCA10 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.68601 x 10-1 92 25 78.63% 117 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61740 ABCA10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 14 7 2 1 66.67% 33.33% 21 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444184'
Avg. expression score for this sample: '26.6269'
Avg. expression score in LCM sample: '45.9016'
Tissue used: 'pure endosperm, no chalazal'
AT5G61740 ABCA10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.12238 x 10-1 15 2 6 18 88.24% 75.00% 17 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.444184'
Avg. expression score for this sample: '20.7037'
Avg. expression score in LCM sample: '45.9016'
Tissue used: 'full endosperm'
AT5G61740 ABCA10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Avg. embryo expression (dissected): '1.22699'
Avg. embryo expression (LCM): '0'
AT5G61740 ABCA10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.67503 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61740 ABCA10 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.38039 x 10-1 74 18 80.43% 92 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61730 ABCA9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.2482 x 10-1 119 20 85.61% 139 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61730 ABCA9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.9039 x 10-2 49 12 8 23 80.33% 74.19% 61 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001507'
Avg. expression score for this sample: '51.4279'
Avg. expression score in LCM sample: '22.5172'
Tissue used: 'pure endosperm, no chalazal'
AT5G61730 ABCA9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.351 x 10-3 14 4 2 39 77.78% 95.12% 18 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001507'
Avg. expression score for this sample: '32.1783'
Avg. expression score in LCM sample: '22.5172'
Tissue used: 'full endosperm'
AT5G61730 ABCA9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 3 1 1 0 75.00% 0.00% 4 1 TAIR8 Avg. embryo expression (dissected): '1.93333'
Avg. embryo expression (LCM): '0'
AT5G61730 ABCA9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.19476 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61730 ABCA9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.522 x 10-2 73 32 69.52% 105 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61720 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.42857 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.52381'
Avg. expression score for this sample: '13.9147'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G61720 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.85714 x 10-1 1 0 3 0 100.00% 0.00% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.52381'
Avg. expression score for this sample: '10.3607'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G61720 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '5.52477'
Avg. embryo expression (LCM): '0'