| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Carubv10017307m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 5.2043 x 10-3 | 31 | 9 | 2 | 28 | 77.50% | 93.33% | 40 | 30 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10017307m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.88 | 263 | 115 | 141 | 276 | 69.58% | 66.19% | 378 | 417 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10017196m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | not imprinted | 0 | 21 | 0 | 0 | 0.00% | 21 | 0 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||||
| Carubv10017196m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | not imprinted | 0.0 | 381 | 18 | 14 | 466 | 95.49% | 97.08% | 399 | 480 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10017109m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.74 | 33 | 8 | 7 | 17 | 80.49% | 70.83% | 41 | 24 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10017109m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 3.84925 x 10-1 | 37 | 2 | 11 | 32 | 94.87% | 74.42% | 39 | 43 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10017022m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 4.57552 x 10-2 | 79 | 255 | 251 | 418 | 23.65% | 62.48% | 334 | 669 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10017022m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.96 | 70 | 148 | 253 | 503 | 32.11% | 66.53% | 218 | 756 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10016961m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 3.757464 x 10-1 | 5 | 1 | 3 | 12 | 83.33% | 80.00% | 6 | 15 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10016961m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 3627 | 7 | 6 | 6691 | 99.81% | 99.91% | 3634 | 6697 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10016796m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | not imprinted | 4.39 x 10-8 | 11 | 29 | 42 | 20 | 27.50% | 32.26% | 40 | 62 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10016796m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 18 | 12 | 20 | 13 | 60.00% | 39.39% | 30 | 33 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10016649m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 5.918297 x 10-1 | 30 | 3 | 8 | 21 | 90.91% | 72.41% | 33 | 29 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10016649m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.49 | 80 | 30 | 25 | 62 | 72.73% | 71.26% | 110 | 87 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10016646m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 2239 | 34 | 39 | 4385 | 98.50% | 99.12% | 2273 | 4424 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency MEG' |
||||
| Carubv10016646m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 2.0 x 10-30 | 353 | 28 | 17 | 351 | 92.65% | 95.38% | 381 | 368 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency MEG' |
||||
| Carubv10016588m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.15 | 452 | 9 | 186 | 435 | 98.05% | 70.05% | 461 | 621 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10016588m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 6.422586 x 10-1 | 943 | 367 | 404 | 780 | 71.98% | 65.88% | 1310 | 1184 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10016583m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | not imprinted | 1.5 x 10-29 | 78 | 186 | 165 | 77 | 29.55% | 31.82% | 264 | 242 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10016583m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 73 | 65 | 166 | 206 | 52.90% | 55.38% | 138 | 372 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10016464m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 1268 | 41 | 39 | 1571 | 96.87% | 97.58% | 1309 | 1610 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10016464m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 530 | 34 | 22 | 401 | 93.97% | 94.80% | 564 | 423 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10016434m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 411 | 0 | 0 | 403 | 100.00% | 100.00% | 411 | 403 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10016434m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | MEG | 1.15913 x 10-2 | 21 | 0 | 0 | 16 | 100.00% | 100.00% | 21 | 16 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10016149m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | no data | 6.85 x 10-9 | 9 | 41 | 39 | 15 | 18.00% | 27.78% | 50 | 54 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10016149m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||||
| Carubv10016116m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 209 | 0 | 0 | 1067 | 100.00% | 100.00% | 209 | 1067 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10016116m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 0 | 0 | 0 | 0 | 0 | 0 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
|||||||
| Carubv10016094m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 1499 | 46 | 26 | 827 | 97.02% | 96.95% | 1545 | 853 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10016094m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | mat bias | MEG | 0.0 | 1538 | 168 | 122 | 776 | 90.15% | 86.41% | 1706 | 898 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10016053m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 367 | 0 | 0 | 1301 | 100.00% | 100.00% | 367 | 1301 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10016053m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 2.113875 x 10-1 | 2 | 4 | 2 | 12 | 33.33% | 85.71% | 6 | 14 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10015962m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 14 | 6 | 63 | 10 | 70.00% | 13.70% | 20 | 73 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10015962m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 0.0 | 48 | 34 | 188 | 30 | 58.54% | 13.76% | 82 | 218 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10015959m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 1.0 | 8 | 0 | 1 | 2 | 100.00% | 66.67% | 8 | 3 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10015959m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | no data | 6.6461 x 10-3 | 20 | 0 | 2 | 27 | 100.00% | 93.10% | 20 | 29 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10015942m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 8.95 x 10-15 | 42 | 2 | 4 | 147 | 95.45% | 97.35% | 44 | 151 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10015942m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 1.4 x 10-16 | 113 | 4 | 4 | 165 | 96.58% | 97.63% | 117 | 169 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10015888m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.63 | 1 | 0 | 3 | 9 | 100.00% | 75.00% | 1 | 12 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10015888m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | no data | 4.168216 x 10-1 | 20 | 0 | 6 | 19 | 100.00% | 76.00% | 20 | 25 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10015859m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | PEG | PEG | 0.0 | 358 | 770 | 556 | 128 | 31.74% | 18.71% | 1128 | 684 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10015859m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | pat bias | PEG | 0.0 | 643 | 1756 | 1632 | 913 | 26.80% | 35.87% | 2399 | 2545 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency PEG' |
||||
| Carubv10015853m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 895 | 22 | 16 | 1611 | 97.60% | 99.02% | 917 | 1627 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10015853m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 692 | 11 | 23 | 1057 | 98.44% | 97.87% | 703 | 1080 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10015701m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | no data | 7.03 x 10-17 | 6 | 201 | 90 | 41 | 2.90% | 31.30% | 207 | 131 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10015701m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.1 | 4 | 11 | 2 | 0 | 26.67% | 0.00% | 15 | 2 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10015568m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 30 | 0 | 0 | 202 | 100.00% | 100.00% | 30 | 202 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10015568m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 0 | 0 | 0 | 0 | 0 | 0 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
|||||||
| Carubv10015520m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 1.36 x 10-8 | 165 | 708 | 311 | 398 | 18.90% | 56.14% | 873 | 709 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10015520m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 507 | 245 | 50 | 967 | 67.42% | 95.08% | 752 | 1017 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10015506m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 2.19616 x 10-2 | 17 | 56 | 36 | 40 | 23.29% | 52.63% | 73 | 76 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10015506m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.74 | 11 | 29 | 34 | 62 | 27.50% | 64.58% | 40 | 96 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10015449m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | no data | 5.299027 x 10-1 | 25 | 0 | 5 | 15 | 100.00% | 75.00% | 25 | 20 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10015449m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.68 | 5 | 0 | 3 | 4 | 100.00% | 57.14% | 5 | 7 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10015371m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | no data | 6.52 x 10-17 | 3 | 140 | 88 | 39 | 2.10% | 30.71% | 143 | 127 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10015371m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.34 | 4 | 1 | 0 | 3 | 80.00% | 100.00% | 5 | 3 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10015366m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | PEG | 0.0 | 22 | 106 | 154 | 53 | 17.19% | 25.60% | 128 | 207 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10015366m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | pat bias | PEG | 1.119324 x 10-1 | 11 | 45 | 15 | 15 | 19.64% | 50.00% | 56 | 30 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency PEG' |
||||
| Carubv10015347m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 1.5605 x 10-3 | 0 | 7 | 6 | 0 | 0.00% | 0.00% | 7 | 6 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10015347m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 841 | 3 | 0 | 354 | 99.64% | 100.00% | 844 | 354 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10015322m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | mat bias | MEG | 7.143 x 10-4 | 19 | 1 | 2 | 37 | 95.00% | 94.87% | 20 | 39 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10015322m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 1.35 x 10-16 | 65 | 8 | 4 | 164 | 89.04% | 97.62% | 73 | 168 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10014932m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 527 | 147 | 287 | 972 | 78.19% | 77.20% | 674 | 1259 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014932m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 0.0 | 270 | 107 | 73 | 812 | 71.62% | 91.75% | 377 | 885 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014883m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 4.377588 x 10-1 | 460 | 141 | 166 | 363 | 76.54% | 68.62% | 601 | 529 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014883m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.33 | 59 | 127 | 141 | 247 | 31.72% | 63.66% | 186 | 388 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014882m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | mat bias | MEG | 0.0 | 115 | 41 | 0 | 332 | 73.72% | 100.00% | 156 | 332 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10014882m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 1.37 x 10-5 | 84 | 1 | 0 | 43 | 98.82% | 100.00% | 85 | 43 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10014802m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 1.67 x 10-16 | 368 | 30 | 15 | 210 | 92.46% | 93.33% | 398 | 225 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10014802m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | mat bias | MEG | 2.06 x 10-19 | 139 | 5 | 60 | 402 | 96.53% | 87.01% | 144 | 462 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'Relaxed stringency MEG' |
||||
| Carubv10014800m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 1.1231 x 10-3 | 24 | 12 | 10 | 63 | 66.67% | 86.30% | 36 | 73 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014800m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.72 | 34 | 3 | 6 | 15 | 91.89% | 71.43% | 37 | 21 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014785m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | no data | 0.7 | 8 | 2 | 5 | 13 | 80.00% | 72.22% | 10 | 18 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10014785m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | no data | 3.1961 x 10-3 | 20 | 4 | 2 | 30 | 83.33% | 93.75% | 24 | 32 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10014778m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | no data | no data | 6.045439 x 10-1 | 4 | 4 | 1 | 4 | 50.00% | 80.00% | 8 | 5 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10014778m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | no data | 0.0 | 6047 | 10 | 11 | 6315 | 99.83% | 99.83% | 6057 | 6326 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Low coverage' |
||||
| Carubv10014716m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 8.165657 x 10-1 | 19 | 14 | 16 | 35 | 57.58% | 68.63% | 33 | 51 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014716m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 29 | 10 | 5 | 48 | 74.36% | 90.57% | 39 | 53 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014524m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 3.69 x 10-9 | 62 | 0 | 0 | 76 | 100.00% | 100.00% | 62 | 76 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency MEG' |
||||
| Carubv10014524m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 316 | 0 | 0 | 402 | 100.00% | 100.00% | 316 | 402 | C. rubella v.1.0 |
Sanger Validation?: 'Consistent' Overall status: 'High stringency MEG' |
||||
| Carubv10014480m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 0.0 | 236 | 0 | 0 | 405 | 100.00% | 100.00% | 236 | 405 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10014480m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 0.0 | 190 | 0 | 0 | 329 | 100.00% | 100.00% | 190 | 329 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10014277m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 1.2252 x 10-3 | 51 | 25 | 3 | 38 | 67.11% | 92.68% | 76 | 41 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014277m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.45 | 14 | 7 | 64 | 148 | 66.67% | 69.81% | 21 | 212 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014225m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | no data | not imprinted | 0.06 | 15 | 4 | 11 | 46 | 78.95% | 80.70% | 19 | 57 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014225m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | not imprinted | 3.1574 x 10-3 | 34 | 3 | 3 | 34 | 91.89% | 91.89% | 37 | 37 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014165m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | not imprinted | 1.99 x 10-24 | 5 | 22 | 60 | 3 | 18.52% | 4.76% | 27 | 63 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014165m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 67 | 29 | 110 | 5 | 69.79% | 4.35% | 96 | 115 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014157m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 9.551 x 10-2 | 38 | 27 | 42 | 119 | 58.46% | 73.91% | 65 | 161 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014157m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | not imprinted | 0.0 | 119 | 2 | 0 | 50 | 98.35% | 100.00% | 121 | 50 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014107m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | not imprinted | 0.0 | 522 | 3 | 8 | 175 | 99.43% | 95.63% | 525 | 183 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014107m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 4.252146 x 10-1 | 311 | 0 | 179 | 327 | 100.00% | 64.62% | 311 | 506 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10014055m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 1.79 x 10-5 | 159 | 60 | 8 | 75 | 72.60% | 90.36% | 219 | 83 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10014055m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.03 | 27 | 9 | 10 | 48 | 75.00% | 82.76% | 36 | 58 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Accession bias' |
||||
| Carubv10013973m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | PEG | not imprinted | 1.74 x 10-26 | 32 | 149 | 135 | 57 | 17.68% | 29.69% | 181 | 192 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10013973m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | not imprinted | not imprinted | 0.0 | 60 | 107 | 86 | 98 | 35.93% | 53.26% | 167 | 184 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10013966m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | not imprinted | not imprinted | 6.6916 x 10-2 | 106 | 27 | 25 | 81 | 79.70% | 76.42% | 133 | 106 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10013966m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | not imprinted | 0.0 | 53 | 6 | 7 | 75 | 89.83% | 91.46% | 59 | 82 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'Unstable imprinting' |
||||
| Carubv10013819m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 1 vs 1 | MEG | MEG | 6.67 x 10-5 | 47 | 1 | 3 | 51 | 97.92% | 94.44% | 48 | 54 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |
||||
| Carubv10013819m.g | endosperm | Hatorangan et al. 2016 | C. rubella Cr A | C. rubella Cr B | late heart / early torpedo | 2 vs 2 | MEG | MEG | 2.734 x 10-4 | 27 | 1 | 0 | 31 | 96.43% | 100.00% | 28 | 31 | C. rubella v.1.0 |
Sanger Validation?: 'Not tested' Overall status: 'High stringency MEG' |