Displaying data sets 39801 - 39900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT4G39345 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G39345 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G39345 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39345 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39340 EC1.4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39340 EC1.4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.669491'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G39340 EC1.4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G39340 EC1.4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '13.314'
Avg. embryo expression (LCM): '3.27779'
AT4G39340 EC1.4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39340 EC1.4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39330 CAD9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.4942 x 10-2 35 6 85.37% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39330 CAD9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.05438 x 10-1 12 6 5 15 66.67% 75.00% 18 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.393923'
Avg. expression score for this sample: '1161.26'
Avg. expression score in LCM sample: '595.016'
Tissue used: 'pure endosperm, no chalazal'
AT4G39330 CAD9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.87039 x 10-1 16 5 16 39 76.19% 70.91% 21 55 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.393923'
Avg. expression score for this sample: '907.319'
Avg. expression score in LCM sample: '595.016'
Tissue used: 'full endosperm'
AT4G39330 CAD9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.39132 x 10-1 22 16 4 5 57.89% 55.56% 38 9 TAIR8 Avg. embryo expression (dissected): '1812.69'
Avg. embryo expression (LCM): '1609.72'
AT4G39330 CAD9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39330 CAD9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.67901 x 10-1 25 6 80.65% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39320 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.365783'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G39320 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.48954'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G39320 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G39320 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39320 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 13 3 81.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 1 2 0.00% 66.67% 1 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.547153'
Avg. expression score for this sample: '10.8662'
Avg. expression score in LCM sample: '2.20469'
Tissue used: 'pure endosperm, no chalazal'
AT4G39300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.05483 x 10-1 11 0 4 9 100.00% 69.23% 11 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.547153'
Avg. expression score for this sample: '20.9273'
Avg. expression score in LCM sample: '2.20469'
Tissue used: 'full endosperm'
AT4G39300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 5 1 1 1 83.33% 50.00% 6 2 TAIR8 Avg. embryo expression (dissected): '20.0301'
Avg. embryo expression (LCM): '54.68'
AT4G39300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.52916 x 10-1 12 0 100.00% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1.17989'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G39290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.64714'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G39290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '1.14283'
AT4G39290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.67053 x 10-1 64 15 81.01% 79 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 1 2 4 83.33% 66.67% 6 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.266305'
Avg. expression score for this sample: '52.5239'
Avg. expression score in LCM sample: '54.2794'
Tissue used: 'pure endosperm, no chalazal'
AT4G39280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.41324 x 10-1 25 11 10 38 69.44% 79.17% 36 48 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.266305'
Avg. expression score for this sample: '109.498'
Avg. expression score in LCM sample: '54.2794'
Tissue used: 'full endosperm'
AT4G39280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 8 7 4 2 53.33% 33.33% 15 6 TAIR8 Avg. embryo expression (dissected): '73.3644'
Avg. embryo expression (LCM): '135.444'
AT4G39280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.8929 x 10-2 1 3 25.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.46366 x 10-1 56 31 64.37% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39270 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 52 11 82.54% 63 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.30014 x 10-1 18 2 0 1 90.00% 100.00% 20 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057402'
Avg. expression score for this sample: '14.7476'
Avg. expression score in LCM sample: '3.79206'
Tissue used: 'pure endosperm, no chalazal'
AT4G39270 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.0951 x 10-1 24 3 5 8 88.89% 61.54% 27 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.057402'
Avg. expression score for this sample: '26.0921'
Avg. expression score in LCM sample: '3.79206'
Tissue used: 'full endosperm'
AT4G39270 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.77512 x 10-1 10 2 12 1 83.33% 7.69% 12 13 TAIR8 Avg. embryo expression (dissected): '18.0098'
Avg. embryo expression (LCM): '23.5097'
AT4G39270 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.52285 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39270 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.10395 x 10-1 7 5 58.33% 12 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39260 CCR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39260 CCR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '14335.3'
Avg. expression score in LCM sample: '10605.1'
Tissue used: 'pure endosperm, no chalazal'
AT4G39260 CCR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '9246.56'
Avg. expression score in LCM sample: '10605.1'
Tissue used: 'full endosperm'
AT4G39260 CCR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '12889.5'
Avg. embryo expression (LCM): '10154.8'
AT4G39260 CCR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39260 CCR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39250 RL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39250 RL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G39250 RL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G39250 RL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G39250 RL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39250 RL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1256 57 95.66% 1313 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.10082 x 10-1 155 29 53 40 84.24% 43.01% 184 93 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000069'
Avg. expression score for this sample: '130.876'
Avg. expression score in LCM sample: '54.544'
Tissue used: 'pure endosperm, no chalazal'
AT4G39240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.0 x 10-5 420 58 163 256 87.87% 61.10% 478 419 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000069'
Avg. expression score for this sample: '267.594'
Avg. expression score in LCM sample: '54.544'
Tissue used: 'full endosperm'
AT4G39240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.09 x 10-4 119 42 16 8 73.91% 33.33% 161 24 TAIR8 Avg. embryo expression (dissected): '125.62'
Avg. embryo expression (LCM): '69.9136'
AT4G39240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0977 x 10-2 41 28 59.42% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.0 x 10-29 437 436 50.06% 873 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39235 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.93 x 10-4 50 2 96.15% 52 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39235 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.92897 x 10-1 14 8 9 29 63.64% 76.32% 22 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.151007'
Avg. expression score for this sample: '29.6428'
Avg. expression score in LCM sample: '2.71911'
Tissue used: 'pure endosperm, no chalazal'
AT4G39235 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.23825 x 10-1 33 10 16 46 76.74% 74.19% 43 62 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.151007'
Avg. expression score for this sample: '35.7446'
Avg. expression score in LCM sample: '2.71911'
Tissue used: 'full endosperm'
AT4G39235 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.5572 x 10-2 27 7 4 2 79.41% 33.33% 34 6 TAIR8 Avg. embryo expression (dissected): '41.3628'
Avg. embryo expression (LCM): '27.8549'
AT4G39235 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.61828 x 10-1 26 5 83.87% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39235 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8069 x 10-2 23 1 95.83% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-8 80 2 97.56% 82 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 14 17 7 37 45.16% 84.09% 31 44 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.437985'
Avg. expression score for this sample: '155.901'
Avg. expression score in LCM sample: '77.7226'
Tissue used: 'pure endosperm, no chalazal'
AT4G39230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.13766 x 10-1 69 22 27 54 75.82% 66.67% 91 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.437985'
Avg. expression score for this sample: '194.773'
Avg. expression score in LCM sample: '77.7226'
Tissue used: 'full endosperm'
AT4G39230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 16 20 8 11 44.44% 57.89% 36 19 TAIR8 Avg. embryo expression (dissected): '164.393'
Avg. embryo expression (LCM): '124.996'
AT4G39230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.98547 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.82 x 10-4 36 1 97.30% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39220 ATRER1A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39220 ATRER1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '266.419'
Avg. expression score in LCM sample: '200.494'
Tissue used: 'pure endosperm, no chalazal'
AT4G39220 ATRER1A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '377.755'
Avg. expression score in LCM sample: '200.494'
Tissue used: 'full endosperm'
AT4G39220 ATRER1A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '240.27'
Avg. embryo expression (LCM): '218.758'
AT4G39220 ATRER1A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39220 ATRER1A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39210 APL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6 x 10-6 1356 7 99.49% 1363 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39210 APL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.75 x 10-4 46 6 2 26 88.46% 92.86% 52 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.8e-30'
Avg. expression score for this sample: '21.3706'
Avg. expression score in LCM sample: '6.80513'
Tissue used: 'pure endosperm, no chalazal'
AT4G39210 APL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.6 x 10-28 164 5 3 160 97.04% 98.16% 169 163 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '3.8e-30'
Avg. expression score for this sample: '63.0226'
Avg. expression score in LCM sample: '6.80513'
Tissue used: 'full endosperm'
AT4G39210 APL3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.35052 x 10-1 10 3 0 2 76.92% 100.00% 13 2 TAIR8 Avg. embryo expression (dissected): '5.11598'
Avg. embryo expression (LCM): '28.4201'
AT4G39210 APL3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.5252 x 10-1 35 2 94.59% 37 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39210 APL3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.02158 x 10-1 262 4 98.50% 266 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.5 x 10-6 159 38 80.71% 197 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.4617 x 10-2 95 102 45 122 48.22% 73.05% 197 167 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.240535'
Avg. expression score for this sample: '482.965'
Avg. expression score in LCM sample: '130.018'
Tissue used: 'pure endosperm, no chalazal'
AT4G39200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.84398 x 10-1 82 35 52 105 70.09% 66.88% 117 157 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.240535'
Avg. expression score for this sample: '281.863'
Avg. expression score in LCM sample: '130.018'
Tissue used: 'full endosperm'
AT4G39200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.9231 x 10-2 234 345 38 61 40.41% 61.62% 579 99 TAIR8 Avg. embryo expression (dissected): '1341.69'
Avg. embryo expression (LCM): '1363.18'
AT4G39200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.0189 x 10-2 45 12 78.95% 57 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.634 x 10-2 168 70 70.59% 238 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39195 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39195 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT4G39195 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT4G39195 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT4G39195 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT4G39195 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'