| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AT5G01440 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT5G01440 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01440 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01440 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01430 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '60.3005' Avg. expression score in LCM sample: '25.6773' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G01430 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '109.902' Avg. expression score in LCM sample: '25.6773' Tissue used: 'full endosperm' |
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| AT5G01430 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '45.5297' Avg. embryo expression (LCM): '34.8501' |
||||||
| AT5G01430 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01430 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01430 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01420 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.54545 x 10-1 | 4 | 0 | 0 | 2 | 100.00% | 100.00% | 4 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.31677' Avg. expression score for this sample: '22.074' Avg. expression score in LCM sample: '11.4203' Tissue used: 'pure endosperm, no chalazal' |
|||||
| AT5G01420 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 0 | 1 | 0 | 5 | 0.00% | 100.00% | 1 | 5 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.31677' Avg. expression score for this sample: '8.95376' Avg. expression score in LCM sample: '11.4203' Tissue used: 'full endosperm' |
|||||
| AT5G01420 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 4 | 0 | 0 | 60.00% | 10 | 0 | TAIR8 |
Avg. embryo expression (dissected): '59.7957' Avg. embryo expression (LCM): '64.7897' |
|||||
| AT5G01420 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01420 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 2.74725 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01420 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01410 | RSR4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.20119 x 10-1 | 18 | 3 | 13 | 8 | 85.71% | 38.10% | 21 | 21 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.348569' Avg. expression score for this sample: '747.219' Avg. expression score in LCM sample: '415.084' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT5G01410 | RSR4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.00183 x 10-1 | 40 | 2 | 18 | 30 | 95.24% | 62.50% | 42 | 48 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.348569' Avg. expression score for this sample: '312.084' Avg. expression score in LCM sample: '415.084' Tissue used: 'full endosperm' |
||||
| AT5G01410 | RSR4 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.18245 x 10-1 | 16 | 9 | 1 | 1 | 64.00% | 50.00% | 25 | 2 | TAIR8 |
Avg. embryo expression (dissected): '1093.07' Avg. embryo expression (LCM): '838.21' |
|||
| AT5G01410 | RSR4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.2857 x 10-2 | 5 | 7 | 41.67% | 12 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01410 | RSR4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.589 x 10-3 | 32 | 31 | 50.79% | 63 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01410 | RSR4 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.344 x 10-3 | 71 | 7 | 91.03% | 78 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01400 | ESP4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.38814 x 10-1 | 53 | 15 | 18 | 48 | 77.94% | 72.73% | 68 | 66 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.031392' Avg. expression score for this sample: '36.3075' Avg. expression score in LCM sample: '33.9669' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT5G01400 | ESP4 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.3796 x 10-1 | 89 | 33 | 32 | 90 | 72.95% | 73.77% | 122 | 122 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.031392' Avg. expression score for this sample: '45.9242' Avg. expression score in LCM sample: '33.9669' Tissue used: 'full endosperm' |
||||
| AT5G01400 | ESP4 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 3.90216 x 10-1 | 33 | 44 | 12 | 9 | 42.86% | 42.86% | 77 | 21 | TAIR8 |
Avg. embryo expression (dissected): '59.8819' Avg. embryo expression (LCM): '50.9878' |
|||
| AT5G01400 | ESP4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 7.92937 x 10-1 | 16 | 4 | 80.00% | 20 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01400 | ESP4 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 9.251 x 10-2 | 151 | 36 | 80.75% | 187 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01400 | ESP4 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.41449 x 10-1 | 147 | 37 | 79.89% | 184 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01390 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '42.3716' Avg. expression score in LCM sample: '37.2592' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G01390 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 1 | 0 | 0 | 2 | 100.00% | 100.00% | 1 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '66.7455' Avg. expression score in LCM sample: '37.2592' Tissue used: 'full endosperm' |
|||||
| AT5G01390 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '46.2475' Avg. embryo expression (LCM): '61.8133' |
||||||
| AT5G01390 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01390 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01390 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01380 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.47981 x 10-1 | 75 | 65 | 80 | 154 | 53.57% | 65.81% | 140 | 234 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.560683' Avg. expression score for this sample: '401.18' Avg. expression score in LCM sample: '67.3899' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G01380 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 2.21247 x 10-1 | 27 | 17 | 25 | 88 | 61.36% | 77.88% | 44 | 113 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.560683' Avg. expression score for this sample: '121.035' Avg. expression score in LCM sample: '67.3899' Tissue used: 'full endosperm' |
|||||
| AT5G01380 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 4.77713 x 10-1 | 4 | 7 | 2 | 1 | 36.36% | 33.33% | 11 | 3 | TAIR8 |
Avg. embryo expression (dissected): '18.1664' Avg. embryo expression (LCM): '0' |
||||
| AT5G01380 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.3809 x 10-2 | 5 | 9 | 35.71% | 14 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01380 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.767 x 10-3 | 29 | 3 | 90.62% | 32 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01380 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 3.3 x 10-9 | 68 | 3 | 95.77% | 71 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01370 | ACI1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 5.45052 x 10-1 | 163 | 141 | 116 | 314 | 53.62% | 73.02% | 304 | 430 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.40253' Avg. expression score for this sample: '543.017' Avg. expression score in LCM sample: '224.54' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G01370 | ACI1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.04224 x 10-1 | 132 | 123 | 218 | 661 | 51.76% | 75.20% | 255 | 879 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.40253' Avg. expression score for this sample: '723.303' Avg. expression score in LCM sample: '224.54' Tissue used: 'full endosperm' |
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| AT5G01370 | ACI1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.2503 x 10-1 | 42 | 38 | 18 | 26 | 52.50% | 59.09% | 80 | 44 | TAIR8 |
Avg. embryo expression (dissected): '145.781' Avg. embryo expression (LCM): '77.072' |
|||
| AT5G01370 | ACI1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.2358 x 10-2 | 34 | 7 | 82.93% | 41 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01370 | ACI1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.57723 x 10-1 | 11 | 10 | 52.38% | 21 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01370 | ACI1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.52 x 10-4 | 27 | 35 | 43.55% | 62 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01365 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G01365 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '0' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G01365 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '0' Avg. embryo expression (LCM): '0' |
||||||
| AT5G01365 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01365 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01365 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01360 | TBL3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 1.0 | 2 | 0 | 0 | 0 | 100.00% | 2 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.34721' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G01360 | TBL3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 1 | 0 | 0 | 0 | 100.00% | 1 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.244994' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G01360 | TBL3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | TAIR8 |
Avg. embryo expression (dissected): '.504019' Avg. embryo expression (LCM): '0' |
||||
| AT5G01360 | TBL3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01360 | TBL3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01360 | TBL3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 247 | 102 | 95 | 150 | 70.77% | 61.22% | 349 | 245 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '8.2e-07' Avg. expression score for this sample: '556.732' Avg. expression score in LCM sample: '273.896' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G01350 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.6 x 10-7 | 1576 | 538 | 610 | 1380 | 74.55% | 69.35% | 2114 | 1990 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '8.2e-07' Avg. expression score for this sample: '1930.76' Avg. expression score in LCM sample: '273.896' Tissue used: 'full endosperm' |
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| AT5G01350 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.59569 x 10-1 | 120 | 85 | 28 | 26 | 58.54% | 48.15% | 205 | 54 | TAIR8 |
Avg. embryo expression (dissected): '355.703' Avg. embryo expression (LCM): '400.857' |
||||
| AT5G01350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.59726 x 10-1 | 241 | 80 | 75.08% | 321 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01350 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 6.54667 x 10-1 | 763 | 317 | 70.65% | 1080 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01350 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 1234 | 161 | 88.46% | 1395 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01340 | mSFC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 8 | 1 | 1 | 0 | 88.89% | 0.00% | 9 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '603.981' Avg. expression score in LCM sample: '201.053' Tissue used: 'pure endosperm, no chalazal' |
||||
| AT5G01340 | mSFC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 7 | 3 | 4 | 5 | 70.00% | 55.56% | 10 | 9 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '417.604' Avg. expression score in LCM sample: '201.053' Tissue used: 'full endosperm' |
||||
| AT5G01340 | mSFC1 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 5.35902 x 10-1 | 6 | 7 | 6 | 2 | 46.15% | 25.00% | 13 | 8 | TAIR8 |
Avg. embryo expression (dissected): '1136.67' Avg. embryo expression (LCM): '581.525' |
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| AT5G01340 | mSFC1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 1 | 0 | 100.00% | 1 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01340 | mSFC1 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 9 | 4 | 69.23% | 13 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01340 | mSFC1 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 6 | 2 | 75.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01330 | PDC3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.379601' Avg. expression score in LCM sample: '.720198' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G01330 | PDC3 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 1.0 | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '1' Avg. expression score for this sample: '.571239' Avg. expression score in LCM sample: '.720198' Tissue used: 'full endosperm' |
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| AT5G01330 | PDC3 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.141758' Avg. embryo expression (LCM): '0' |
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| AT5G01330 | PDC3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01330 | PDC3 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01330 | PDC3 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01320 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 1.0 | 3 | 0 | 0 | 1 | 100.00% | 100.00% | 3 | 1 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.171919' Avg. expression score for this sample: '.775554' Avg. expression score in LCM sample: '0' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G01320 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.1677 x 10-1 | 8 | 1 | 0 | 3 | 88.89% | 100.00% | 9 | 3 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.171919' Avg. expression score for this sample: '3.40114' Avg. expression score in LCM sample: '0' Tissue used: 'full endosperm' |
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| AT5G01320 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '.374277' Avg. embryo expression (LCM): '0' |
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| AT5G01320 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 1.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01320 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.1255 x 10-2 | 45 | 24 | 65.22% | 69 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01320 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 1.0 | 8 | 0 | 100.00% | 8 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01310 | APTX | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 4.32822 x 10-1 | 10 | 4 | 4 | 19 | 71.43% | 82.61% | 14 | 23 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.445755' Avg. expression score for this sample: '20.996' Avg. expression score in LCM sample: '24.7366' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G01310 | APTX | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 1.0 | 22 | 8 | 12 | 22 | 73.33% | 64.71% | 30 | 34 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.445755' Avg. expression score for this sample: '29.3844' Avg. expression score in LCM sample: '24.7366' Tissue used: 'full endosperm' |
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| AT5G01310 | APTX | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.0 | 14 | 13 | 3 | 4 | 51.85% | 57.14% | 27 | 7 | TAIR8 |
Avg. embryo expression (dissected): '27.2083' Avg. embryo expression (LCM): '17.9211' |
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| AT5G01310 | APTX | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 4.85818 x 10-1 | 1 | 1 | 50.00% | 2 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01310 | APTX | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 3.23185 x 10-1 | 27 | 16 | 62.79% | 43 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01310 | APTX | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 8.48541 x 10-1 | 35 | 15 | 70.00% | 50 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||
| AT5G01300 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '313.879' Avg. expression score in LCM sample: '6.09963' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G01300 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '0' Avg. expression score for this sample: '307.095' Avg. expression score in LCM sample: '6.09963' Tissue used: 'full endosperm' |
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| AT5G01300 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | 0 | 0 | 0 | TAIR8 |
Avg. embryo expression (dissected): '1850.99' Avg. embryo expression (LCM): '33.0039' |
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| AT5G01300 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01300 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01300 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 0.0 | 0 | 0 | 0 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | |||||||||
| AT5G01290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 1 vs 1 | not imprinted | 8.66455 x 10-1 | 26 | 16 | 12 | 24 | 61.90% | 66.67% | 42 | 36 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.459629' Avg. expression score for this sample: '94.1906' Avg. expression score in LCM sample: '41.9185' Tissue used: 'pure endosperm, no chalazal' |
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| AT5G01290 | endosperm | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | 2 vs 2 | not imprinted | 3.22993 x 10-1 | 128 | 54 | 47 | 113 | 70.33% | 70.62% | 182 | 160 | TAIR8 |
Validated by Sanger sequencing: '-' Overall p-value after pooling both replicates: '.459629' Avg. expression score for this sample: '164.518' Avg. expression score in LCM sample: '41.9185' Tissue used: 'full endosperm' |
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| AT5G01290 | embryo | Hsieh et al. 2011 | A. thaliana Col | A. thaliana Ler | late torpedo / early bent | N/A | N/A | not imprinted | 1.64841 x 10-1 | 23 | 46 | 6 | 10 | 33.33% | 62.50% | 69 | 16 | TAIR8 |
Avg. embryo expression (dissected): '116.173' Avg. embryo expression (LCM): '66.2967' |
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| AT5G01290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler | A. thaliana Col-gl met1-6 | late torpedo / early bent | N/A | N/A | no data | 5.72543 x 10-1 | 27 | 9 | 75.00% | 36 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01290 | endosperm | Hsieh et al. 2011 | A. thaliana Ler fie-1 | A. thaliana Col | late torpedo / early bent | N/A | N/A | no data | 1.032 x 10-3 | 199 | 47 | 80.89% | 246 | TAIR8 | Mutant effect: 'N/A (not a MEG)' | ||||||||
| AT5G01290 | endosperm | Hsieh et al. 2011 | A. thaliana Col-gl dme-2 | A. thaliana Ler | late torpedo / early bent | N/A | N/A | no data | 2.5 x 10-6 | 180 | 29 | 86.12% | 209 | TAIR8 | Mutant effect: 'N/A (not a MEG)' |