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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G62050 OXA1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.23097 x 10-1 15 3 2 2 83.33% 50.00% 18 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.753614'
Avg. expression score for this sample: '46.131'
Avg. expression score in LCM sample: '21.5765'
Tissue used: 'full endosperm'
AT5G62050 OXA1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '44.7834'
Avg. embryo expression (LCM): '47.9361'
AT5G62050 OXA1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62050 OXA1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.51008 x 10-1 5 3 62.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62040 BFT endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.13569 x 10-1 36 25 59.02% 61 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62040 BFT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G62040 BFT endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.73099'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G62040 BFT embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.83443'
Avg. embryo expression (LCM): '0'
AT5G62040 BFT endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62040 BFT endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 17 7 70.83% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62030 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.26472 x 10-1 25 4 86.21% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.4472 x 10-1 8 2 0 3 80.00% 100.00% 10 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.706073'
Avg. expression score for this sample: '64.9641'
Avg. expression score in LCM sample: '43.5205'
Tissue used: 'pure endosperm, no chalazal'
AT5G62030 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 17 5 12 18 77.27% 60.00% 22 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.706073'
Avg. expression score for this sample: '99.6449'
Avg. expression score in LCM sample: '43.5205'
Tissue used: 'full endosperm'
AT5G62030 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 9 7 1 0 56.25% 0.00% 16 1 TAIR8 Avg. embryo expression (dissected): '105.138'
Avg. embryo expression (LCM): '129.303'
AT5G62030 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.13462 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62030 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.21579 x 10-1 37 11 77.08% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62020 HSFB2A endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62020 HSFB2A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '160.956'
Avg. expression score in LCM sample: '15.9913'
Tissue used: 'pure endosperm, no chalazal'
AT5G62020 HSFB2A endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '226.427'
Avg. expression score in LCM sample: '15.9913'
Tissue used: 'full endosperm'
AT5G62020 HSFB2A embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '167.374'
Avg. embryo expression (LCM): '5.97788'
AT5G62020 HSFB2A endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62020 HSFB2A endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62000 ARF2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.4 x 10-17 371 62 85.68% 433 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62000 ARF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.98927 x 10-1 347 161 172 273 68.31% 61.35% 508 445 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.813037'
Avg. expression score for this sample: '1623.78'
Avg. expression score in LCM sample: '906.097'
Tissue used: 'pure endosperm, no chalazal'
AT5G62000 ARF2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.51708 x 10-1 504 257 275 578 66.23% 67.76% 761 853 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.813037'
Avg. expression score for this sample: '1414.24'
Avg. expression score in LCM sample: '906.097'
Tissue used: 'full endosperm'
AT5G62000 ARF2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.38452 x 10-1 161 156 57 59 50.79% 50.86% 317 116 TAIR8 Avg. embryo expression (dissected): '987.571'
Avg. embryo expression (LCM): '512.089'
AT5G62000 ARF2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.7617 x 10-2 145 51 73.98% 196 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62000 ARF2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.9 x 10-10 335 79 80.92% 414 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61997 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61997 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '37.0431'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G61997 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '15.7967'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G61997 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G61997 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61997 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61990 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.543 x 10-3 46 4 92.00% 50 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.08843 x 10-1 9 10 4 9 47.37% 69.23% 19 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.78783'
Avg. expression score for this sample: '156.63'
Avg. expression score in LCM sample: '119.303'
Tissue used: 'pure endosperm, no chalazal'
AT5G61990 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.4223 x 10-1 37 8 17 33 82.22% 66.00% 45 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.78783'
Avg. expression score for this sample: '212.236'
Avg. expression score in LCM sample: '119.303'
Tissue used: 'full endosperm'
AT5G61990 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 13 10 0 1 56.52% 100.00% 23 1 TAIR8 Avg. embryo expression (dissected): '147.937'
Avg. embryo expression (LCM): '122.685'
AT5G61990 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.23193 x 10-1 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61990 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.55342 x 10-1 32 16 66.67% 48 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61980 AGD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61980 AGD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '17.6527'
Avg. expression score in LCM sample: '6.3789'
Tissue used: 'pure endosperm, no chalazal'
AT5G61980 AGD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '25.5752'
Avg. expression score in LCM sample: '6.3789'
Tissue used: 'full endosperm'
AT5G61980 AGD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '15.4937'
Avg. embryo expression (LCM): '8.91659'
AT5G61980 AGD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61980 AGD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61970 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.53073 x 10-1 8 3 72.73% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.224503'
Avg. expression score for this sample: '48.6891'
Avg. expression score in LCM sample: '31.9974'
Tissue used: 'pure endosperm, no chalazal'
AT5G61970 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.89847 x 10-1 5 2 0 8 71.43% 100.00% 7 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.224503'
Avg. expression score for this sample: '67.1718'
Avg. expression score in LCM sample: '31.9974'
Tissue used: 'full endosperm'
AT5G61970 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '92.3303'
Avg. embryo expression (LCM): '99.3132'
AT5G61970 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61970 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.319 x 10-2 15 13 53.57% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61960 ML1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61960 ML1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '134.341'
Avg. expression score in LCM sample: '103.635'
Tissue used: 'pure endosperm, no chalazal'
AT5G61960 ML1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '208.565'
Avg. expression score in LCM sample: '103.635'
Tissue used: 'full endosperm'
AT5G61960 ML1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '141.866'
Avg. embryo expression (LCM): '90.1706'
AT5G61960 ML1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61960 ML1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61950 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 1 0 0 0.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.24904'
Avg. expression score in LCM sample: '.867177'
Tissue used: 'pure endosperm, no chalazal'
AT5G61950 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 1 4 0.00% 80.00% 1 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6.48264'
Avg. expression score in LCM sample: '.867177'
Tissue used: 'full endosperm'
AT5G61950 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 0 0 33.33% 3 0 TAIR8 Avg. embryo expression (dissected): '14.961'
Avg. embryo expression (LCM): '16.3136'
AT5G61950 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61950 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 6 3 66.67% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 10 5 66.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 2 1 50.00% 33.33% 2 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.13089'
Avg. expression score in LCM sample: '.896573'
Tissue used: 'pure endosperm, no chalazal'
AT5G61940 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 2 3 10 50.00% 76.92% 4 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '3.13218'
Avg. expression score in LCM sample: '.896573'
Tissue used: 'full endosperm'
AT5G61940 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.2381 x 10-1 3 1 0 1 75.00% 100.00% 4 1 TAIR8 Avg. embryo expression (dissected): '4.80964'
Avg. embryo expression (LCM): '4.98575'
AT5G61940 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.37029 x 10-1 10 9 52.63% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61930 APO3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.13181 x 10-1 57 7 89.06% 64 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61930 APO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.44444 x 10-1 3 0 0 2 100.00% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010896'
Avg. expression score for this sample: '22.2385'
Avg. expression score in LCM sample: '5.80568'
Tissue used: 'pure endosperm, no chalazal'
AT5G61930 APO3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.9403 x 10-2 10 0 2 15 100.00% 88.24% 10 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.010896'
Avg. expression score for this sample: '36.3464'
Avg. expression score in LCM sample: '5.80568'
Tissue used: 'full endosperm'
AT5G61930 APO3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 0 0 33.33% 3 0 TAIR8 Avg. embryo expression (dissected): '35.7351'
Avg. embryo expression (LCM): '28.9601'
AT5G61930 APO3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61930 APO3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.409 x 10-3 28 16 63.64% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '98.4484'
Avg. expression score in LCM sample: '26.2211'
Tissue used: 'pure endosperm, no chalazal'
AT5G61920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '148.988'
Avg. expression score in LCM sample: '26.2211'
Tissue used: 'full endosperm'
AT5G61920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '110.23'
Avg. embryo expression (LCM): '56.0238'
AT5G61920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.5 x 10-19 463 33 93.35% 496 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.01908 x 10-1 48 15 33 53 76.19% 61.63% 63 86 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.089865'
Avg. expression score for this sample: '77.0143'
Avg. expression score in LCM sample: '49.5467'
Tissue used: 'pure endosperm, no chalazal'
AT5G61910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.7543 x 10-2 136 30 54 102 81.93% 65.38% 166 156 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.089865'
Avg. expression score for this sample: '80.4741'
Avg. expression score in LCM sample: '49.5467'
Tissue used: 'full endosperm'
AT5G61910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.83045 x 10-1 80 57 34 20 58.39% 37.04% 137 54 TAIR8 Avg. embryo expression (dissected): '152.632'
Avg. embryo expression (LCM): '88.764'
AT5G61910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.4725 x 10-1 20 4 83.33% 24 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.4942 x 10-2 197 55 78.17% 252 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61900 BON1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.67331 x 10-1 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61900 BON1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.901 x 10-3 8 0 0 14 100.00% 100.00% 8 14 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004931'
Avg. expression score for this sample: '33.5943'
Avg. expression score in LCM sample: '5.01199'
Tissue used: 'pure endosperm, no chalazal'
AT5G61900 BON1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.02126 x 10-1 18 3 1 5 85.71% 83.33% 21 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.004931'
Avg. expression score for this sample: '111.292'
Avg. expression score in LCM sample: '5.01199'
Tissue used: 'full endosperm'
AT5G61900 BON1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 12 9 4 2 57.14% 33.33% 21 6 TAIR8 Avg. embryo expression (dissected): '42.3059'
Avg. embryo expression (LCM): '8.56495'
AT5G61900 BON1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61900 BON1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 10 1 90.91% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.562927'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G61890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.07979'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G61890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G61890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G61890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'