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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G02630 Cand6 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.57 x 10-4 100 21 82.64% 121 TAIR8 Mutant effect: 'MEG affected by fie'
AT5G02630 Cand6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.3e-07'
Avg. expression score for this sample: '1.64131'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G02630 Cand6 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 3.0 x 10-7 30 0 0 26 100.00% 100.00% 30 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.3e-07'
Avg. expression score for this sample: '10.864'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G02630 Cand6 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '.820117'
Avg. embryo expression (LCM): '0'
AT5G02630 Cand6 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 5 0 100.00% 5 TAIR8 Mutant effect: 'MEG affected by fie'
AT5G02630 Cand6 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.7 x 10-5 91 26 77.78% 117 TAIR8 Mutant effect: 'MEG affected by fie'
AT5G02620 ANK1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02620 ANK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 0 2 100.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.134614'
Avg. expression score for this sample: '6.96239'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G02620 ANK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.94389 x 10-1 9 0 2 5 100.00% 71.43% 9 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.134614'
Avg. expression score for this sample: '20.7557'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G02620 ANK1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 1 0 100.00% 0.00% 2 1 TAIR8 Avg. embryo expression (dissected): '15.8572'
Avg. embryo expression (LCM): '9.49428'
AT5G02620 ANK1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02620 ANK1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02615 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02615 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G02615 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G02615 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G02615 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02615 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8544 x 10-2 140 25 84.85% 165 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.79242 x 10-1 34 7 11 20 82.93% 64.52% 41 31 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.056398'
Avg. expression score for this sample: '54.8843'
Avg. expression score in LCM sample: '64.3034'
Tissue used: 'pure endosperm, no chalazal'
AT5G02610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.18896 x 10-1 56 13 29 71 81.16% 71.00% 69 100 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.056398'
Avg. expression score for this sample: '99.0936'
Avg. expression score in LCM sample: '64.3034'
Tissue used: 'full endosperm'
AT5G02610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 33 34 7 10 49.25% 58.82% 67 17 TAIR8 Avg. embryo expression (dissected): '116.444'
Avg. embryo expression (LCM): '359.1'
AT5G02610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 23 7 76.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 94 31 75.20% 125 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02600 NAKR1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.53846 x 10-1 22 0 100.00% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02600 NAKR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 0 100.00% 1 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.63666'
Avg. expression score in LCM sample: '6.39359'
Tissue used: 'pure endosperm, no chalazal'
AT5G02600 NAKR1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 1 0 1 50.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.328358'
Avg. expression score in LCM sample: '6.39359'
Tissue used: 'full endosperm'
AT5G02600 NAKR1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.180212'
Avg. embryo expression (LCM): '0'
AT5G02600 NAKR1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02600 NAKR1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.5291 x 10-2 3 17 15.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02590 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.69231 x 10-1 6 1 85.71% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '71.2236'
Avg. expression score in LCM sample: '33.6141'
Tissue used: 'pure endosperm, no chalazal'
AT5G02590 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 2 3 100.00% 60.00% 1 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '65.8683'
Avg. expression score in LCM sample: '33.6141'
Tissue used: 'full endosperm'
AT5G02590 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '249.747'
Avg. embryo expression (LCM): '205.672'
AT5G02590 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02590 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.67285 x 10-1 13 5 72.22% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02580 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3 x 10-13 180 0 100.00% 180 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 0 2 0 100.00% 0.00% 5 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.340644'
Avg. expression score for this sample: '3.57764'
Avg. expression score in LCM sample: '2.04301'
Tissue used: 'pure endosperm, no chalazal'
AT5G02580 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.15239 x 10-1 4 0 9 0 100.00% 0.00% 4 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.340644'
Avg. expression score for this sample: '5.75143'
Avg. expression score in LCM sample: '2.04301'
Tissue used: 'full endosperm'
AT5G02580 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.403785'
Avg. embryo expression (LCM): '0'
AT5G02580 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02580 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.04 x 10-4 2 38 5.00% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02570 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.45658 x 10-1 20 11 64.52% 31 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 1 0 0 50.00% 2 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.28852'
Avg. expression score in LCM sample: '3.68918'
Tissue used: 'pure endosperm, no chalazal'
AT5G02570 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 0 0 3 100.00% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.839841'
Avg. expression score in LCM sample: '3.68918'
Tissue used: 'full endosperm'
AT5G02570 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G02570 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02570 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 65 12 84.42% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02560 HTA12 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.5529 x 10-2 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02560 HTA12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 3 1 3 3 75.00% 50.00% 4 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.10506'
Avg. expression score for this sample: '1468.05'
Avg. expression score in LCM sample: '377.942'
Tissue used: 'pure endosperm, no chalazal'
AT5G02560 HTA12 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.2353 x 10-2 27 0 12 27 100.00% 69.23% 27 39 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.10506'
Avg. expression score for this sample: '1629.3'
Avg. expression score in LCM sample: '377.942'
Tissue used: 'full endosperm'
AT5G02560 HTA12 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 0 0 33.33% 3 0 TAIR8 Avg. embryo expression (dissected): '1487.29'
Avg. embryo expression (LCM): '642.095'
AT5G02560 HTA12 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.36295 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02560 HTA12 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.79781 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '28.6772'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G02550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 1 1 100.00% 50.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '14.834'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G02550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '198.646'
Avg. embryo expression (LCM): '47.3458'
AT5G02550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02540 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.2179 x 10-2 529 4 99.25% 533 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.71919 x 10-1 15 1 0 0 93.75% 16 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001514'
Avg. expression score for this sample: '10.4741'
Avg. expression score in LCM sample: '6.92272'
Tissue used: 'pure endosperm, no chalazal'
AT5G02540 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.3215 x 10-2 17 0 1 7 100.00% 87.50% 17 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.001514'
Avg. expression score for this sample: '11.045'
Avg. expression score in LCM sample: '6.92272'
Tissue used: 'full endosperm'
AT5G02540 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.47175 x 10-1 19 17 6 15 52.78% 71.43% 36 21 TAIR8 Avg. embryo expression (dissected): '73.4955'
Avg. embryo expression (LCM): '88.7891'
AT5G02540 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 6 0 100.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02540 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.76357 x 10-1 39 4 90.70% 43 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02530 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 11080 2158 83.70% 13238 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.38972 x 10-1 2944 1248 1221 2251 70.23% 64.83% 4192 3472 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.5e-31'
Avg. expression score for this sample: '5319.18'
Avg. expression score in LCM sample: '1265.39'
Tissue used: 'pure endosperm, no chalazal'
AT5G02530 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 3687 1306 2309 6613 73.84% 74.12% 4993 8922 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '6.5e-31'
Avg. expression score for this sample: '4275.9'
Avg. expression score in LCM sample: '1265.39'
Tissue used: 'full endosperm'
AT5G02530 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.67681 x 10-1 3892 3481 1264 1047 52.79% 45.31% 7373 2311 TAIR8 Avg. embryo expression (dissected): '10003.2'
Avg. embryo expression (LCM): '4663.72'
AT5G02530 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.61832 x 10-1 904 372 70.85% 1276 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02530 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.2 x 10-17 9581 3021 76.03% 12602 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.7 x 10-8 501 101 83.22% 602 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.91825 x 10-1 88 48 24 79 64.71% 76.70% 136 103 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.218421'
Avg. expression score for this sample: '59.4331'
Avg. expression score in LCM sample: '28.2053'
Tissue used: 'pure endosperm, no chalazal'
AT5G02520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.07064 x 10-1 93 39 91 211 70.45% 69.87% 132 302 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.218421'
Avg. expression score for this sample: '70.8876'
Avg. expression score in LCM sample: '28.2053'
Tissue used: 'full endosperm'
AT5G02520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.62924 x 10-1 107 144 42 41 42.63% 49.40% 251 83 TAIR8 Avg. embryo expression (dissected): '121.79'
Avg. embryo expression (LCM): '58.0206'
AT5G02520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.10336 x 10-1 24 5 82.76% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.64737 x 10-1 744 304 70.99% 1048 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02510 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.9 x 10-6 94 1 98.95% 95 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.48389 x 10-1 29 6 13 15 82.86% 53.57% 35 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.030204'
Avg. expression score for this sample: '79.2969'
Avg. expression score in LCM sample: '24.6337'
Tissue used: 'pure endosperm, no chalazal'
AT5G02510 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.351 x 10-3 39 5 1 14 88.64% 93.33% 44 15 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.030204'
Avg. expression score for this sample: '53.194'
Avg. expression score in LCM sample: '24.6337'
Tissue used: 'full endosperm'
AT5G02510 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 2 0 2 1 100.00% 33.33% 2 3 TAIR8 Avg. embryo expression (dissected): '8.24832'
Avg. embryo expression (LCM): '0'
AT5G02510 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02510 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.49 x 10-4 73 3 96.05% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02505 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02505 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G02505 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G02505 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G02505 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02505 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02502 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02502 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.362'
Avg. expression score in LCM sample: '33.9816'
Tissue used: 'pure endosperm, no chalazal'
AT5G02502 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '62.3981'
Avg. expression score in LCM sample: '33.9816'
Tissue used: 'full endosperm'
AT5G02502 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '32.4878'
Avg. embryo expression (LCM): '79.8474'
AT5G02502 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02502 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02500 HSC70-1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 4657 143 97.02% 4800 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02500 HSC70-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.104 x 10-3 297 297 260 577 50.00% 68.94% 594 837 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007348'
Avg. expression score for this sample: '1558.34'
Avg. expression score in LCM sample: '304.864'
Tissue used: 'pure endosperm, no chalazal'
AT5G02500 HSC70-1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 x 10-6 1200 587 769 2172 67.15% 73.85% 1787 2941 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.007348'
Avg. expression score for this sample: '1696.21'
Avg. expression score in LCM sample: '304.864'
Tissue used: 'full endosperm'
AT5G02500 HSC70-1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.77851 x 10-1 1554 1514 478 490 50.65% 50.62% 3068 968 TAIR8 Avg. embryo expression (dissected): '7278.5'
Avg. embryo expression (LCM): '7576.98'