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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G02940 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.81266 x 10-1 9 12 42.86% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02940 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.30918 x 10-1 13 3 81.25% 16 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.75979'
Avg. expression score in LCM sample: '4.17421'
Tissue used: 'pure endosperm, no chalazal'
AT5G02930 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.69239'
Avg. expression score in LCM sample: '4.17421'
Tissue used: 'full endosperm'
AT5G02930 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 0 0 100.00% 1 0 TAIR8 Avg. embryo expression (dissected): '.619021'
Avg. embryo expression (LCM): '0'
AT5G02930 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02930 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 2 66.67% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02930 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 3 0 5 0.00% 100.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.780788'
Avg. expression score for this sample: '5.57659'
Avg. expression score in LCM sample: '2.63093'
Tissue used: 'pure endosperm, no chalazal'
AT5G02920 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 7 1 10 22.22% 90.91% 9 11 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.780788'
Avg. expression score for this sample: '7.09902'
Avg. expression score in LCM sample: '2.63093'
Tissue used: 'full endosperm'
AT5G02920 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.44749'
Avg. embryo expression (LCM): '0'
AT5G02920 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02920 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.12204 x 10-1 16 4 80.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02920 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8404 x 10-2 0 6 0.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 1 50.00% 0 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '19.1273'
Avg. expression score in LCM sample: '15.2417'
Tissue used: 'pure endosperm, no chalazal'
AT5G02910 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '22.1348'
Avg. expression score in LCM sample: '15.2417'
Tissue used: 'full endosperm'
AT5G02910 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 1 1 1 0.00% 50.00% 1 2 TAIR8 Avg. embryo expression (dissected): '17.9858'
Avg. embryo expression (LCM): '11.3906'
AT5G02910 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02910 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 7 2 77.78% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02910 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 1 83.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02900 CYP96A13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G02900 CYP96A13 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.35752'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G02900 CYP96A13 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G02900 CYP96A13 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02900 CYP96A13 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02900 CYP96A13 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '125.465'
Avg. expression score in LCM sample: '7.23137'
Tissue used: 'pure endosperm, no chalazal'
AT5G02890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '213.669'
Avg. expression score in LCM sample: '7.23137'
Tissue used: 'full endosperm'
AT5G02890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '59.4378'
Avg. embryo expression (LCM): '88.6008'
AT5G02890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02880 UPL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 MEG 7.19405 x 10-1 30 10 11 21 75.00% 65.62% 40 32 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.1e-09'
Avg. expression score for this sample: '74.7973'
Avg. expression score in LCM sample: '170.172'
Tissue used: 'pure endosperm, no chalazal'
AT5G02880 UPL4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 MEG 5.9 x 10-10 168 34 53 266 83.17% 83.39% 202 319 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.1e-09'
Avg. expression score for this sample: '154.808'
Avg. expression score in LCM sample: '170.172'
Tissue used: 'full endosperm'
AT5G02880 UPL4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.72482 x 10-1 13 7 3 0 65.00% 0.00% 20 3 TAIR8 Avg. embryo expression (dissected): '45.0934'
Avg. embryo expression (LCM): '26.1093'
AT5G02880 UPL4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.49243 x 10-1 43 8 84.31% 51 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G02880 UPL4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.2243 x 10-2 502 150 76.99% 652 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G02880 UPL4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.165 x 10-3 614 84 87.97% 698 TAIR8 Mutant effect: 'MEG not affected by met1, dme or fie'
AT5G02870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1811.84'
Avg. expression score in LCM sample: '622.648'
Tissue used: 'pure endosperm, no chalazal'
AT5G02870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1336.36'
Avg. expression score in LCM sample: '622.648'
Tissue used: 'full endosperm'
AT5G02870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '6023.59'
Avg. embryo expression (LCM): '4514.43'
AT5G02870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '43.8124'
Avg. expression score in LCM sample: '29.8809'
Tissue used: 'pure endosperm, no chalazal'
AT5G02860 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '75.3158'
Avg. expression score in LCM sample: '29.8809'
Tissue used: 'full endosperm'
AT5G02860 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '132.925'
Avg. embryo expression (LCM): '84.2681'
AT5G02860 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02860 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02860 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.69921 x 10-1 1 2 4 4 33.33% 50.00% 3 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.564807'
Avg. expression score for this sample: '57.4'
Avg. expression score in LCM sample: '44.1966'
Tissue used: 'pure endosperm, no chalazal'
AT5G02850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.7683 x 10-2 1 1 0 16 50.00% 100.00% 2 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.564807'
Avg. expression score for this sample: '60.018'
Avg. expression score in LCM sample: '44.1966'
Tissue used: 'full endosperm'
AT5G02850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.08392 x 10-1 4 1 1 1 80.00% 50.00% 5 2 TAIR8 Avg. embryo expression (dissected): '90.3454'
Avg. embryo expression (LCM): '93.2098'
AT5G02850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.53673 x 10-1 33 7 82.50% 40 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.55066 x 10-1 16 7 69.57% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02840 LCL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.75428 x 10-1 37 26 14 21 58.73% 60.00% 63 35 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.468854'
Avg. expression score for this sample: '67.8338'
Avg. expression score in LCM sample: '15.6974'
Tissue used: 'pure endosperm, no chalazal'
AT5G02840 LCL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.06255 x 10-1 261 120 71 186 68.50% 72.37% 381 257 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.468854'
Avg. expression score for this sample: '225.653'
Avg. expression score in LCM sample: '15.6974'
Tissue used: 'full endosperm'
AT5G02840 LCL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.36003 x 10-1 27 20 2 4 57.45% 66.67% 47 6 TAIR8 Avg. embryo expression (dissected): '64.8826'
Avg. embryo expression (LCM): '49.1919'
AT5G02840 LCL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.5591 x 10-2 30 6 83.33% 36 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02840 LCL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.24475 x 10-1 62 18 77.50% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02840 LCL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.28 x 10-4 94 17 84.68% 111 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.60327 x 10-1 39 24 6 39 61.90% 86.67% 63 45 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323316'
Avg. expression score for this sample: '45.0718'
Avg. expression score in LCM sample: '12.1993'
Tissue used: 'pure endosperm, no chalazal'
AT5G02830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.52068 x 10-1 64 37 34 100 63.37% 74.63% 101 134 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.323316'
Avg. expression score for this sample: '67.0663'
Avg. expression score in LCM sample: '12.1993'
Tissue used: 'full endosperm'
AT5G02830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.00544 x 10-1 54 50 12 12 51.92% 50.00% 104 24 TAIR8 Avg. embryo expression (dissected): '76.8253'
Avg. embryo expression (LCM): '57.1039'
AT5G02830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.03733 x 10-1 25 5 83.33% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.49637 x 10-1 111 43 72.08% 154 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.68882 x 10-1 113 42 72.90% 155 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02820 RHL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.4169 x 10-2 186 89 113 136 67.64% 54.62% 275 249 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.049542'
Avg. expression score for this sample: '84.6693'
Avg. expression score in LCM sample: '68.4629'
Tissue used: 'pure endosperm, no chalazal'
AT5G02820 RHL2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.51716 x 10-1 109 35 122 162 75.69% 57.04% 144 284 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.049542'
Avg. expression score for this sample: '49.3009'
Avg. expression score in LCM sample: '68.4629'
Tissue used: 'full endosperm'
AT5G02820 RHL2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.808 x 10-3 389 276 71 85 58.50% 54.49% 665 156 TAIR8 Avg. embryo expression (dissected): '181.075'
Avg. embryo expression (LCM): '177.026'
AT5G02820 RHL2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3598 x 10-1 39 34 53.42% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02820 RHL2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.93 x 10-4 532 455 53.90% 987 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02820 RHL2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-13 604 164 78.65% 768 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02815 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G02815 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G02815 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G02815 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02815 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02815 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02811 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G02811 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G02811 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.94847'
Avg. embryo expression (LCM): '0'
AT5G02811 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02811 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02811 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02810 PRR7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.3 x 10-7 2151 1045 1260 3311 67.30% 72.43% 3196 4571 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.7e-33'
Avg. expression score for this sample: '1403.66'
Avg. expression score in LCM sample: '302.086'
Tissue used: 'pure endosperm, no chalazal'
AT5G02810 PRR7 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 2665 1175 658 3016 69.40% 82.09% 3840 3674 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '9.7e-33'
Avg. expression score for this sample: '1147.03'
Avg. expression score in LCM sample: '302.086'
Tissue used: 'full endosperm'
AT5G02810 PRR7 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.7383 x 10-2 1085 1172 530 763 48.07% 59.01% 2257 1293 TAIR8 Avg. embryo expression (dissected): '1163.5'
Avg. embryo expression (LCM): '396.072'
AT5G02810 PRR7 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.5 x 10-17 728 124 85.45% 852 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02810 PRR7 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1738 172 90.99% 1910 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02810 PRR7 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 2548 276 90.23% 2824 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02800 CDL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.68203 x 10-1 38 19 14 44 66.67% 75.86% 57 58 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.073405'
Avg. expression score for this sample: '135.589'
Avg. expression score in LCM sample: '28.8814'
Tissue used: 'pure endosperm, no chalazal'
AT5G02800 CDL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.8887 x 10-2 50 15 22 69 76.92% 75.82% 65 91 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.073405'
Avg. expression score for this sample: '170.945'
Avg. expression score in LCM sample: '28.8814'
Tissue used: 'full endosperm'
AT5G02800 CDL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 18 28 5 16 39.13% 76.19% 46 21 TAIR8 Avg. embryo expression (dissected): '85.9387'
Avg. embryo expression (LCM): '78.7925'
AT5G02800 CDL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.1464 x 10-2 23 2 92.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02800 CDL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.8 x 10-5 50 1 98.04% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02800 CDL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-10 154 5 96.86% 159 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02790 GSTL3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G02790 GSTL3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '124.414'
Avg. expression score in LCM sample: '75.8853'
Tissue used: 'pure endosperm, no chalazal'