Displaying data sets 37701 - 37800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G03260 LAC11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G03260 LAC11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03260 LAC11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.37874 x 10-1 10 18 35.71% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03260 LAC11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 15 15 1 15 50.00% 93.75% 30 16 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.868883'
Avg. expression score for this sample: '11.9503'
Avg. expression score in LCM sample: '8.17204'
Tissue used: 'pure endosperm, no chalazal'
AT5G03250 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 4 9 12 71.43% 57.14% 14 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.868883'
Avg. expression score for this sample: '9.01997'
Avg. expression score in LCM sample: '8.17204'
Tissue used: 'full endosperm'
AT5G03250 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.2349 x 10-1 5 9 13 4 35.71% 23.53% 14 17 TAIR8 Avg. embryo expression (dissected): '22.7123'
Avg. embryo expression (LCM): '17.4564'
AT5G03250 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03250 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.08368 x 10-1 6 2 75.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03250 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.56402 x 10-1 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03240 UBQ3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 1933 293 489 1389 86.84% 73.96% 2226 1878 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '1088.91'
Avg. expression score in LCM sample: '235.637'
Tissue used: 'pure endosperm, no chalazal'
AT5G03240 UBQ3 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 6123 453 635 6187 93.11% 90.69% 6576 6822 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2800.21'
Avg. expression score in LCM sample: '235.637'
Tissue used: 'full endosperm'
AT5G03240 UBQ3 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.42 x 10-4 661 437 157 135 60.20% 46.23% 1098 292 TAIR8 Avg. embryo expression (dissected): '548.89'
Avg. embryo expression (LCM): '208.46'
AT5G03240 UBQ3 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.1 x 10-5 1311 103 92.72% 1414 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03240 UBQ3 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 4935 1709 74.28% 6644 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03240 UBQ3 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 6199 1225 83.50% 7424 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '97.2646'
Avg. expression score in LCM sample: '18.5635'
Tissue used: 'pure endosperm, no chalazal'
AT5G03230 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '76.3124'
Avg. expression score in LCM sample: '18.5635'
Tissue used: 'full endosperm'
AT5G03230 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '51.8706'
Avg. embryo expression (LCM): '21.6259'
AT5G03230 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03230 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03230 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085449'
Avg. expression score for this sample: '8.84296'
Avg. expression score in LCM sample: '4.02723'
Tissue used: 'pure endosperm, no chalazal'
AT5G03220 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.64734 x 10-1 0 1 0 13 0.00% 100.00% 1 13 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.085449'
Avg. expression score for this sample: '19.4749'
Avg. expression score in LCM sample: '4.02723'
Tissue used: 'full endosperm'
AT5G03220 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 2 0 0 33.33% 3 0 TAIR8 Avg. embryo expression (dissected): '6.24093'
Avg. embryo expression (LCM): '8.60262'
AT5G03220 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03220 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.009 x 10-2 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03220 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 8 0 100.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03210 DIP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '68.1033'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G03210 DIP2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 1 0 1 0.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '141.76'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G03210 DIP2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '95.7709'
Avg. embryo expression (LCM): '2.34845'
AT5G03210 DIP2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03210 DIP2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03210 DIP2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03204 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G03204 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G03204 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G03204 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03204 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03204 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03200 LUL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.0382 x 10-2 384 139 220 479 73.42% 68.53% 523 699 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00235'
Avg. expression score for this sample: '687.191'
Avg. expression score in LCM sample: '207.02'
Tissue used: 'pure endosperm, no chalazal'
AT5G03200 LUL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.5886 x 10-2 246 26 75 53 90.44% 41.41% 272 128 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.00235'
Avg. expression score for this sample: '313.54'
Avg. expression score in LCM sample: '207.02'
Tissue used: 'full endosperm'
AT5G03200 LUL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 8.2 x 10-5 141 13 58 14 91.56% 19.44% 154 72 TAIR8 Avg. embryo expression (dissected): '207.175'
Avg. embryo expression (LCM): '128.725'
AT5G03200 LUL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 8.4767 x 10-2 11 10 52.38% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03200 LUL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.7703 x 10-2 54 33 62.07% 87 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03200 LUL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4 x 10-15 151 5 96.79% 156 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03190 CPUORF47 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.48569 x 10-1 46 23 13 50 66.67% 79.37% 69 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.041008'
Avg. expression score for this sample: '148.618'
Avg. expression score in LCM sample: '23.4285'
Tissue used: 'pure endosperm, no chalazal'
AT5G03190 CPUORF47 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.9231 x 10-2 68 24 18 63 73.91% 77.78% 92 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.041008'
Avg. expression score for this sample: '184.919'
Avg. expression score in LCM sample: '23.4285'
Tissue used: 'full endosperm'
AT5G03190 CPUORF47 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.30495 x 10-1 69 46 13 11 60.00% 45.83% 115 24 TAIR8 Avg. embryo expression (dissected): '241.678'
Avg. embryo expression (LCM): '146.973'
AT5G03190 CPUORF47 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.3781 x 10-1 20 5 80.00% 25 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03190 CPUORF47 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.6 x 10-5 38 0 100.00% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03190 CPUORF47 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.3 x 10-9 120 4 96.77% 124 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 20 8 8 15 71.43% 65.22% 28 23 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.8e-07'
Avg. expression score for this sample: '64.8467'
Avg. expression score in LCM sample: '29.1166'
Tissue used: 'pure endosperm, no chalazal'
AT5G03180 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 x 10-7 95 27 21 171 77.87% 89.06% 122 192 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '7.8e-07'
Avg. expression score for this sample: '157.796'
Avg. expression score in LCM sample: '29.1166'
Tissue used: 'full endosperm'
AT5G03180 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 14 12 5 4 53.85% 44.44% 26 9 TAIR8 Avg. embryo expression (dissected): '51.0417'
Avg. embryo expression (LCM): '64.5385'
AT5G03180 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.38365 x 10-1 31 2 93.94% 33 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03180 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.86898 x 10-1 172 26 86.87% 198 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03180 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.4554 x 10-2 236 33 87.73% 269 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03170 FLA11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '34.1186'
Avg. expression score in LCM sample: '1.61677'
Tissue used: 'pure endosperm, no chalazal'
AT5G03170 FLA11 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '98.2235'
Avg. expression score in LCM sample: '1.61677'
Tissue used: 'full endosperm'
AT5G03170 FLA11 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '17.4081'
Avg. embryo expression (LCM): '0'
AT5G03170 FLA11 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03170 FLA11 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03170 FLA11 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03160 P58IPK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 9 1 4 4 90.00% 50.00% 10 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.159105'
Avg. expression score for this sample: '602.663'
Avg. expression score in LCM sample: '167.88'
Tissue used: 'pure endosperm, no chalazal'
AT5G03160 P58IPK endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.13792 x 10-1 41 10 22 54 80.39% 71.05% 51 76 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.159105'
Avg. expression score for this sample: '263.226'
Avg. expression score in LCM sample: '167.88'
Tissue used: 'full endosperm'
AT5G03160 P58IPK embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.46965 x 10-1 8 4 0 0 66.67% 12 0 TAIR8 Avg. embryo expression (dissected): '1005.66'
Avg. embryo expression (LCM): '303.39'
AT5G03160 P58IPK endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.71787 x 10-1 12 5 70.59% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03160 P58IPK endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.30039 x 10-1 53 24 68.83% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03160 P58IPK endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.1 x 10-4 111 10 91.74% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03150 JKD endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 0 2 66.67% 100.00% 3 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.507678'
Avg. expression score for this sample: '18.6585'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G03150 JKD endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.49482 x 10-1 6 6 2 0 50.00% 0.00% 12 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.507678'
Avg. expression score for this sample: '31.4061'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G03150 JKD embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 35 36 8 8 49.30% 50.00% 71 16 TAIR8 Avg. embryo expression (dissected): '372.192'
Avg. embryo expression (LCM): '127.306'
AT5G03150 JKD endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 3 50.00% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03150 JKD endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.18083 x 10-1 5 0 100.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03150 JKD endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.4026 x 10-1 3 0 100.00% 3 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.31038 x 10-1 27 9 5 21 75.00% 80.77% 36 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000332'
Avg. expression score for this sample: '46.0826'
Avg. expression score in LCM sample: '14.5362'
Tissue used: 'pure endosperm, no chalazal'
AT5G03140 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.32 x 10-4 38 6 4 46 86.36% 92.00% 44 50 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.000332'
Avg. expression score for this sample: '59.4121'
Avg. expression score in LCM sample: '14.5362'
Tissue used: 'full endosperm'
AT5G03140 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.69982 x 10-1 21 26 10 2 44.68% 16.67% 47 12 TAIR8 Avg. embryo expression (dissected): '63.6259'
Avg. embryo expression (LCM): '30.5425'
AT5G03140 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 24 4 85.71% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03140 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.2 x 10-6 93 0 100.00% 93 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03140 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.8 x 10-5 125 2 98.43% 127 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G03130 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G03130 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.702958'
Avg. embryo expression (LCM): '0'
AT5G03130 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03130 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03130 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.449061'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G03120 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 1 0 0.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.36517'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G03120 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 0 2 0 2 0.00% 100.00% 2 2 TAIR8 Avg. embryo expression (dissected): '27.4954'
Avg. embryo expression (LCM): '0'
AT5G03120 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03120 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03120 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 2 1 2 33.33% 66.67% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.768813'
Avg. expression score for this sample: '5.82372'
Avg. expression score in LCM sample: '2.54274'
Tissue used: 'pure endosperm, no chalazal'
AT5G03110 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 8 3 4 4 72.73% 50.00% 11 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.768813'
Avg. expression score for this sample: '18.3053'
Avg. expression score in LCM sample: '2.54274'
Tissue used: 'full endosperm'
AT5G03110 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.51186 x 10-1 7 7 1 4 50.00% 80.00% 14 5 TAIR8 Avg. embryo expression (dissected): '26.4412'
Avg. embryo expression (LCM): '24.9916'
AT5G03110 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03110 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03110 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.13669 x 10-1 8 1 88.89% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'