Displaying data sets 37201 - 37300 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G03910 ABCB29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '38.9125'
Avg. expression score in LCM sample: '24.0899'
Tissue used: 'pure endosperm, no chalazal'
AT5G03910 ABCB29 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '44.6203'
Avg. expression score in LCM sample: '24.0899'
Tissue used: 'full endosperm'
AT5G03910 ABCB29 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '53.614'
Avg. embryo expression (LCM): '65.1665'
AT5G03910 ABCB29 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03910 ABCB29 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03910 ABCB29 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03905 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '50.8205'
Avg. expression score in LCM sample: '32.7029'
Tissue used: 'pure endosperm, no chalazal'
AT5G03905 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '70.025'
Avg. expression score in LCM sample: '32.7029'
Tissue used: 'full endosperm'
AT5G03905 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '50.1307'
Avg. embryo expression (LCM): '58.8244'
AT5G03905 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03905 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03905 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.9006 x 10-2 16 4 4 21 80.00% 84.00% 20 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.215942'
Avg. expression score for this sample: '280.191'
Avg. expression score in LCM sample: '161.339'
Tissue used: 'pure endosperm, no chalazal'
AT5G03900 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.70525 x 10-1 30 12 21 45 71.43% 68.18% 42 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.215942'
Avg. expression score for this sample: '152.424'
Avg. expression score in LCM sample: '161.339'
Tissue used: 'full endosperm'
AT5G03900 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 19 25 4 9 43.18% 69.23% 44 13 TAIR8 Avg. embryo expression (dissected): '368.747'
Avg. embryo expression (LCM): '165.422'
AT5G03900 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.64853 x 10-1 5 4 55.56% 9 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03900 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 54 19 73.97% 73 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03900 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3794 x 10-2 61 8 88.41% 69 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.951447'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G03890 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G03890 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '16.1316'
Avg. embryo expression (LCM): '0'
AT5G03890 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03890 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03890 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.648 x 10-2 0 16 0 9 0.00% 100.00% 16 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.379272'
Avg. expression score for this sample: '89.4975'
Avg. expression score in LCM sample: '15.9031'
Tissue used: 'pure endosperm, no chalazal'
AT5G03880 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 53 0 102 0.00% 100.00% 53 102 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.379272'
Avg. expression score for this sample: '76.5827'
Avg. expression score in LCM sample: '15.9031'
Tissue used: 'full endosperm'
AT5G03880 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 2.447 x 10-3 0 15 0 0 0.00% 15 0 TAIR8 Avg. embryo expression (dissected): '49.0473'
Avg. embryo expression (LCM): '44.9597'
AT5G03880 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.8 x 10-5 22 0 100.00% 22 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03880 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 7.6 x 10-11 59 0 100.00% 59 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03880 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.7 x 10-15 0 41 0.00% 41 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.3358 x 10-2 453 229 244 312 66.42% 56.12% 682 556 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.3e-06'
Avg. expression score for this sample: '425.482'
Avg. expression score in LCM sample: '286.33'
Tissue used: 'pure endosperm, no chalazal'
AT5G03870 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.4 x 10-5 194 152 216 294 56.07% 57.65% 346 510 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '5.3e-06'
Avg. expression score for this sample: '236.561'
Avg. expression score in LCM sample: '286.33'
Tissue used: 'full endosperm'
AT5G03870 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.4683 x 10-2 1369 1211 483 516 53.06% 51.65% 2580 999 TAIR8 Avg. embryo expression (dissected): '1983.53'
Avg. embryo expression (LCM): '1079.33'
AT5G03870 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 4.29436 x 10-1 54 30 64.29% 84 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03870 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.02797 x 10-1 17 6 73.91% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03870 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.73956 x 10-1 72 40 64.29% 112 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03860 MLS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '101.833'
Avg. expression score in LCM sample: '22.429'
Tissue used: 'pure endosperm, no chalazal'
AT5G03860 MLS endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '80.4586'
Avg. expression score in LCM sample: '22.429'
Tissue used: 'full endosperm'
AT5G03860 MLS embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '150.423'
Avg. embryo expression (LCM): '1.98426'
AT5G03860 MLS endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03860 MLS endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03860 MLS endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '613.185'
Avg. expression score in LCM sample: '360.334'
Tissue used: 'pure endosperm, no chalazal'
AT5G03850 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '987.349'
Avg. expression score in LCM sample: '360.334'
Tissue used: 'full endosperm'
AT5G03850 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1342.33'
Avg. embryo expression (LCM): '3786.49'
AT5G03850 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03850 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03850 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03840 TFL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '29.8992'
Avg. expression score in LCM sample: '79.5745'
Tissue used: 'pure endosperm, no chalazal'
AT5G03840 TFL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '8.45961'
Avg. expression score in LCM sample: '79.5745'
Tissue used: 'full endosperm'
AT5G03840 TFL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '4.47782'
Avg. embryo expression (LCM): '0'
AT5G03840 TFL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03840 TFL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03840 TFL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03837 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G03837 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G03837 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G03837 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03837 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03837 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 4 100.00% 80.00% 1 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1.64359'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G03830 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 5 7 1 7 41.67% 87.50% 12 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '4.22916'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G03830 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.45455 x 10-1 1 3 2 0 25.00% 0.00% 4 2 TAIR8 Avg. embryo expression (dissected): '2.98714'
Avg. embryo expression (LCM): '7.94958'
AT5G03830 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03830 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.47619 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03830 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.49333 x 10-1 7 0 100.00% 7 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.99023 x 10-1 3214 2014 2191 5489 61.48% 71.47% 5228 7680 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014277'
Avg. expression score for this sample: '3405.79'
Avg. expression score in LCM sample: '2426.8'
Tissue used: 'pure endosperm, no chalazal'
AT5G03820 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.8602 x 10-2 1728 1378 1025 3486 55.63% 77.28% 3106 4511 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.014277'
Avg. expression score for this sample: '1342.31'
Avg. expression score in LCM sample: '2426.8'
Tissue used: 'full endosperm'
AT5G03820 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.7 x 10-9 167 89 55 156 65.23% 73.93% 256 211 TAIR8 Avg. embryo expression (dissected): '238.849'
Avg. embryo expression (LCM): '41.0038'
AT5G03820 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.5 x 10-6 748 250 74.95% 998 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03820 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.62 x 10-4 149 37 80.11% 186 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03820 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.9 x 10-13 161 170 48.64% 331 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.82833 x 10-1 62 1 32 10 98.41% 23.81% 63 42 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '6060.38'
Avg. expression score in LCM sample: '1410'
Tissue used: 'pure endosperm, no chalazal'
AT5G03810 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.30238 x 10-1 17 4 14 12 80.95% 46.15% 21 26 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '1834.45'
Avg. expression score in LCM sample: '1410'
Tissue used: 'full endosperm'
AT5G03810 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 4.28571 x 10-1 3 0 0 0 100.00% 3 0 TAIR8 Avg. embryo expression (dissected): '394.098'
Avg. embryo expression (LCM): '15.4471'
AT5G03810 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.343 x 10-3 3 11 21.43% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03810 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03810 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.16968 x 10-1 0 2 0.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03800 EMB175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 12 2 5 4 85.71% 44.44% 14 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.777515'
Avg. expression score for this sample: '13.5423'
Avg. expression score in LCM sample: '4.71803'
Tissue used: 'pure endosperm, no chalazal'
AT5G03800 EMB175 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.31919 x 10-1 30 16 17 24 65.22% 58.54% 46 41 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.777515'
Avg. expression score for this sample: '25.6282'
Avg. expression score in LCM sample: '4.71803'
Tissue used: 'full endosperm'
AT5G03800 EMB175 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.79492 x 10-1 24 15 1 2 61.54% 66.67% 39 3 TAIR8 Avg. embryo expression (dissected): '49.8387'
Avg. embryo expression (LCM): '42.5233'
AT5G03800 EMB175 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 3 1 75.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03800 EMB175 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.8506 x 10-1 63 34 64.95% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03800 EMB175 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.347 x 10-2 41 10 80.39% 51 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03795 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.31799 x 10-1 9 8 10 9 52.94% 47.37% 17 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0801'
Avg. expression score for this sample: '53.5984'
Avg. expression score in LCM sample: '8.08385'
Tissue used: 'pure endosperm, no chalazal'
AT5G03795 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.64006 x 10-1 197 68 87 54 74.34% 38.30% 265 141 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.0801'
Avg. expression score for this sample: '289.174'
Avg. expression score in LCM sample: '8.08385'
Tissue used: 'full endosperm'
AT5G03795 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.802 x 10-3 53 16 7 12 76.81% 63.16% 69 19 TAIR8 Avg. embryo expression (dissected): '266.865'
Avg. embryo expression (LCM): '201.816'
AT5G03795 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 10 7 58.82% 17 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03795 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.676 x 10-3 0 5 0.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03795 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6 x 10-5 60 10 85.71% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03790 HB51 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 8 4 3 6 66.67% 66.67% 12 9 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.548985'
Avg. expression score for this sample: '13.8397'
Avg. expression score in LCM sample: '2.07241'
Tissue used: 'pure endosperm, no chalazal'
AT5G03790 HB51 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.48473 x 10-1 9 4 5 20 69.23% 80.00% 13 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.548985'
Avg. expression score for this sample: '18.4515'
Avg. expression score in LCM sample: '2.07241'
Tissue used: 'full endosperm'
AT5G03790 HB51 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 16 14 5 3 53.33% 37.50% 30 8 TAIR8 Avg. embryo expression (dissected): '63.85'
Avg. embryo expression (LCM): '47.9612'
AT5G03790 HB51 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03790 HB51 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03790 HB51 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.83333 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G03780 TRFL10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.60744 x 10-1 9 9 2 5 50.00% 71.43% 18 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '145.6'
Avg. expression score in LCM sample: '74.2245'
Tissue used: 'pure endosperm, no chalazal'
AT5G03780 TRFL10 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 5.64807 x 10-1 7 4 3 15 63.64% 83.33% 11 18 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '170.335'
Avg. expression score in LCM sample: '74.2245'
Tissue used: 'full endosperm'
AT5G03780 TRFL10 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.57862 x 10-1 12 8 1 0 60.00% 0.00% 20 1 TAIR8 Avg. embryo expression (dissected): '147.866'
Avg. embryo expression (LCM): '107.64'
AT5G03780 TRFL10 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.45455 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'