| Gene ID | Gene Name | Tissue | Study | Parent A | Parent B | Stage | Replicate | Replicate Imprinting Status | Overall Imprinting Status | Imprinting p-value | Imprinting Score | A x B, A counts | A x B, B counts | B x A, A counts | B x A, B counts | % Maternal AxB | % Maternal BxA | Tot Counts AxB | Tot Counts BxA | Strain Score | Strain p-value | Genome Assembly | Notes |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GRMZM2G466394 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.749 x 10-4 | 140 | 59 | 122 | 70 | 70.35% | 36.46% | 199 | 192 | RefGen V2 |
χ2 p-value for B73 x Mo17: '9.36e-09' χ2 p-value for Mo17 x B73: '.0001749' Biased in favor of strain: 'B73' |
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| GRMZM2G466394 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.937584 x 10-1 | 6 | 5 | 9 | 5 | 54.55% | 35.71% | 11 | 14 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3937584' χ2 p-value for Mo17 x B73: '.0140193' Biased in favor of strain: '' |
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| GRMZM2G466298 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 3 | 0 | 2 | 0.00% | 100.00% | 3 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0832645' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G466298 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 1 | 0 | 1 | 0.00% | 100.00% | 1 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572964' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G466292 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 9 | 5 | 3 | 35.71% | 37.50% | 14 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2850494' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G466292 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 8 | 0 | 1 | 50.00% | 100.00% | 16 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572923' χ2 p-value for Mo17 x B73: '.4795001' Biased in favor of strain: '' |
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| GRMZM2G466270 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.946258 x 10-1 | 29 | 28 | 19 | 18 | 50.88% | 48.65% | 57 | 37 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8946258' χ2 p-value for Mo17 x B73: '.8694171' Biased in favor of strain: '' |
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| GRMZM2G466270 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.514373 x 10-1 | 27 | 19 | 14 | 40 | 58.70% | 74.07% | 46 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2514373' χ2 p-value for Mo17 x B73: '.2482132' Biased in favor of strain: '' |
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| GRMZM2G466265 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.21 x 10-7 | 0 | 28 | 0 | 29 | 0.00% | 100.00% | 28 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.21e-07' χ2 p-value for Mo17 x B73: '7.24e-08' Biased in favor of strain: 'Mo17' |
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| GRMZM2G466265 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.402 x 10-4 | 1 | 10 | 0 | 29 | 9.09% | 100.00% | 11 | 29 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000051' χ2 p-value for Mo17 x B73: '.0001402' Biased in favor of strain: 'Mo17' |
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| GRMZM2G466139 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.53138 x 10-1 | 203 | 143 | 113 | 102 | 58.67% | 47.44% | 346 | 215 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.001257' χ2 p-value for Mo17 x B73: '.453138' Biased in favor of strain: '' |
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| GRMZM2G466139 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.39002 x 10-2 | 165 | 60 | 114 | 175 | 73.33% | 60.55% | 225 | 289 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0339002' χ2 p-value for Mo17 x B73: '.0274885' Biased in favor of strain: '' |
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| GRMZM2G466044 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 1 | 1 | 50.00% | 50.00% | 2 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G466044 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
|||||||
| GRMZM2G465953 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.185458 x 10-1 | 10 | 9 | 3 | 9 | 52.63% | 75.00% | 19 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8185458' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
||||
| GRMZM2G465953 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 3 | 0 | 8 | 25.00% | 100.00% | 4 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0770973' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G465833 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.27 x 10-6 | 301 | 134 | 249 | 152 | 69.20% | 37.91% | 435 | 401 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.18e-15' χ2 p-value for Mo17 x B73: '1.27e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G465833 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.16 x 10-9 | 272 | 59 | 172 | 97 | 82.18% | 36.06% | 331 | 269 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.16e-09' χ2 p-value for Mo17 x B73: '1.76e-26' Biased in favor of strain: 'B73' |
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| GRMZM2G465806 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.272594 x 10-1 | 10 | 5 | 10 | 11 | 66.67% | 52.38% | 15 | 21 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1967056' χ2 p-value for Mo17 x B73: '.8272594' Biased in favor of strain: '' |
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| GRMZM2G465806 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 1 | 1 | 0 | 0 | 50.00% | 2 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G465771 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.69975 x 10-2 | 187 | 107 | 153 | 114 | 63.61% | 42.70% | 294 | 267 | RefGen V2 |
χ2 p-value for B73 x Mo17: '3.08e-06' χ2 p-value for Mo17 x B73: '.0169975' Biased in favor of strain: 'B73' |
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| GRMZM2G465771 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.999995 x 10-1 | 65 | 51 | 38 | 76 | 56.03% | 66.67% | 116 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.015131' χ2 p-value for Mo17 x B73: '.9999995' Biased in favor of strain: '' |
||||
| GRMZM2G465769 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 3.759291 x 10-1 | 140 | 113 | 151 | 136 | 55.34% | 47.39% | 253 | 287 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0896068' χ2 p-value for Mo17 x B73: '.3759291' Biased in favor of strain: '' |
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| GRMZM2G465769 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.794995 x 10-1 | 230 | 93 | 140 | 260 | 71.21% | 65.00% | 323 | 400 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0834379' χ2 p-value for Mo17 x B73: '.4794995' Biased in favor of strain: '' |
||||
| GRMZM2G465734 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.43 x 10-6 | 56 | 16 | 50 | 9 | 77.78% | 15.25% | 72 | 59 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.43e-06' χ2 p-value for Mo17 x B73: '9.41e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G465734 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G465728 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.8821 x 10-3 | 241 | 160 | 240 | 179 | 60.10% | 42.72% | 401 | 419 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000523' χ2 p-value for Mo17 x B73: '.0028821' Biased in favor of strain: 'B73' |
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| GRMZM2G465728 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.84632 x 10-2 | 102 | 33 | 46 | 30 | 75.56% | 39.47% | 135 | 76 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0284632' χ2 p-value for Mo17 x B73: '4.93e-07' Biased in favor of strain: '' |
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| GRMZM2G465689 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G465689 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 8 | 0 | 0 | 0 | 100.00% | 8 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G465617 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 0 | 2 | 100.00% | 100.00% | 7 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.008151' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G465617 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 68 | 0 | 0 | 6 | 100.00% | 100.00% | 68 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.51e-09' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G465595 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 1 | 0 | 0.00% | 0.00% | 2 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.3173105' Biased in favor of strain: '' |
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| GRMZM2G465595 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G465553 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 6 | 13 | 0 | 6 | 31.58% | 100.00% | 19 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1082937' χ2 p-value for Mo17 x B73: '.0143059' Biased in favor of strain: '' |
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| GRMZM2G465553 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.170598 x 10-1 | 11 | 7 | 6 | 7 | 61.11% | 53.85% | 18 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6170598' χ2 p-value for Mo17 x B73: '.3267995' Biased in favor of strain: '' |
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| GRMZM2G465444 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.7958 x 10-3 | 144 | 90 | 156 | 110 | 61.54% | 41.35% | 234 | 266 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0004154' χ2 p-value for Mo17 x B73: '.0047958' Biased in favor of strain: 'B73' |
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| GRMZM2G465444 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.141865 x 10-1 | 68 | 40 | 55 | 59 | 62.96% | 51.75% | 108 | 114 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.4141865' χ2 p-value for Mo17 x B73: '.0007313' Biased in favor of strain: '' |
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| GRMZM2G465333 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.01 x 10-5 | 92 | 46 | 86 | 22 | 66.67% | 20.37% | 138 | 108 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000901' χ2 p-value for Mo17 x B73: '7.35e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G465333 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.487496 x 10-1 | 36 | 11 | 41 | 53 | 76.60% | 56.38% | 47 | 94 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1487496' χ2 p-value for Mo17 x B73: '.0344263' Biased in favor of strain: '' |
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| GRMZM2G465287 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.702828 x 10-1 | 74 | 76 | 89 | 61 | 49.33% | 40.67% | 150 | 150 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8702828' χ2 p-value for Mo17 x B73: '.0222431' Biased in favor of strain: '' |
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| GRMZM2G465287 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.985536 x 10-1 | 21 | 9 | 16 | 23 | 70.00% | 58.97% | 30 | 39 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.6985536' χ2 p-value for Mo17 x B73: '.3081794' Biased in favor of strain: '' |
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| GRMZM2G465208 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.12 x 10-6 | 398 | 275 | 396 | 237 | 59.14% | 37.44% | 673 | 633 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.12e-06' χ2 p-value for Mo17 x B73: '2.62e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G465208 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.402792 x 10-1 | 7 | 5 | 9 | 7 | 58.33% | 43.75% | 12 | 16 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.5402792' χ2 p-value for Mo17 x B73: '.0518299' Biased in favor of strain: '' |
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| GRMZM2G465169 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 1446 | 472 | 1289 | 483 | 75.39% | 27.26% | 1918 | 1772 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G465169 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.47 x 10-9 | 381 | 97 | 282 | 156 | 79.71% | 35.62% | 478 | 438 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.47e-09' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G465091 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.487665 x 10-1 | 68 | 56 | 56 | 54 | 54.84% | 49.09% | 124 | 110 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2811981' χ2 p-value for Mo17 x B73: '.8487665' Biased in favor of strain: '' |
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| GRMZM2G465091 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 1 | 1 | 100.00% | 50.00% | 7 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.617075' Biased in favor of strain: '' |
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| GRMZM2G464985 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.23 x 10-9 | 53 | 4 | 44 | 3 | 92.98% | 6.38% | 57 | 47 | RefGen V2 |
χ2 p-value for B73 x Mo17: '8.57e-11' χ2 p-value for Mo17 x B73: '2.23e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G464985 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.43065 x 10-2 | 24 | 3 | 11 | 2 | 88.89% | 15.38% | 27 | 13 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0143065' χ2 p-value for Mo17 x B73: '.0000877' Biased in favor of strain: '' |
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| GRMZM2G464976 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.68 x 10-9 | 961 | 722 | 806 | 568 | 57.10% | 41.34% | 1683 | 1374 | RefGen V2 |
χ2 p-value for B73 x Mo17: '5.68e-09' χ2 p-value for Mo17 x B73: '1.36e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G464976 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.11 x 10-6 | 863 | 313 | 410 | 601 | 73.38% | 59.45% | 1176 | 1011 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.03e-06' χ2 p-value for Mo17 x B73: '1.11e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G464891 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.382565 x 10-1 | 39 | 48 | 49 | 47 | 44.83% | 48.96% | 87 | 96 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3345942' χ2 p-value for Mo17 x B73: '.8382565' Biased in favor of strain: '' |
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| GRMZM2G464891 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 6 | 1 | 8 | 53.85% | 88.89% | 13 | 9 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.3267895' χ2 p-value for Mo17 x B73: '.1572992' Biased in favor of strain: '' |
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| GRMZM2G464885 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.09 x 10-8 | 93 | 4 | 48 | 6 | 95.88% | 11.11% | 97 | 54 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.62e-19' χ2 p-value for Mo17 x B73: '1.09e-08' Biased in favor of strain: 'B73' |
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| GRMZM2G464885 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G464818 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.099 x 10-4 | 63 | 29 | 64 | 31 | 68.48% | 32.63% | 92 | 95 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000393' χ2 p-value for Mo17 x B73: '.0007099' Biased in favor of strain: 'B73' |
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| GRMZM2G464818 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.55032 x 10-2 | 40 | 10 | 6 | 36 | 80.00% | 85.71% | 50 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455032' χ2 p-value for Mo17 x B73: '.0088288' Biased in favor of strain: '' |
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| GRMZM2G464782 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 0.0 | 287 | 16 | 232 | 7 | 94.72% | 2.93% | 303 | 239 | RefGen V2 |
χ2 p-value for B73 x Mo17: '0' χ2 p-value for Mo17 x B73: '0' Biased in favor of strain: 'B73' |
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| GRMZM2G464782 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.85 x 10-6 | 110 | 17 | 57 | 24 | 86.61% | 29.63% | 127 | 81 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.85e-06' χ2 p-value for Mo17 x B73: '1.54e-12' Biased in favor of strain: 'B73' |
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| GRMZM2G464754 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.013932 x 10-1 | 415 | 379 | 279 | 326 | 52.27% | 53.88% | 794 | 605 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2013932' χ2 p-value for Mo17 x B73: '.0560275' Biased in favor of strain: '' |
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| GRMZM2G464754 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.218934 x 10-1 | 419 | 231 | 218 | 449 | 64.46% | 67.32% | 650 | 667 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.2329751' χ2 p-value for Mo17 x B73: '.7218934' Biased in favor of strain: '' |
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| GRMZM2G464680 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.28359 x 10-2 | 136 | 107 | 180 | 138 | 55.97% | 43.40% | 243 | 318 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0628359' χ2 p-value for Mo17 x B73: '.0185106' Biased in favor of strain: '' |
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| GRMZM2G464680 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 0 | 0.00% | 0 | 1 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
||||||
| GRMZM2G464575 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.411898 x 10-1 | 270 | 218 | 240 | 215 | 55.33% | 47.25% | 488 | 455 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0185761' χ2 p-value for Mo17 x B73: '.2411898' Biased in favor of strain: '' |
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| GRMZM2G464575 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.239277 x 10-1 | 345 | 133 | 161 | 307 | 72.18% | 65.60% | 478 | 468 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0106204' χ2 p-value for Mo17 x B73: '.6239277' Biased in favor of strain: '' |
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| GRMZM2G464523 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.055303 x 10-1 | 36 | 35 | 27 | 19 | 50.70% | 41.30% | 71 | 46 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.9055303' χ2 p-value for Mo17 x B73: '.2381849' Biased in favor of strain: '' |
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| GRMZM2G464523 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.801856 x 10-1 | 15 | 7 | 14 | 10 | 68.18% | 41.67% | 22 | 24 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.8801856' χ2 p-value for Mo17 x B73: '.0093748' Biased in favor of strain: '' |
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| GRMZM2G464515 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.513491 x 10-1 | 13 | 7 | 12 | 7 | 65.00% | 36.84% | 20 | 19 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1797125' χ2 p-value for Mo17 x B73: '.2513491' Biased in favor of strain: '' |
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| GRMZM2G464515 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 7 | 0 | 0 | 6 | 100.00% | 100.00% | 7 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0613697' χ2 p-value for Mo17 x B73: '.0832645' Biased in favor of strain: '' |
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| GRMZM2G464491 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.0 | 7 | 23 | 21 | 21 | 23.33% | 50.00% | 30 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.003487' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G464491 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 6 | 3 | 5 | 40.00% | 62.50% | 10 | 8 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0736349' χ2 p-value for Mo17 x B73: '.8025872' Biased in favor of strain: '' |
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| GRMZM2G464393 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.24 x 10-4 | 904 | 748 | 904 | 745 | 54.72% | 45.18% | 1652 | 1649 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.000124' χ2 p-value for Mo17 x B73: '.0000902' Biased in favor of strain: 'B73' |
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| GRMZM2G464393 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.55017 x 10-2 | 16 | 2 | 11 | 1 | 88.89% | 8.33% | 18 | 12 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0455017' χ2 p-value for Mo17 x B73: '.0000181' Biased in favor of strain: '' |
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| GRMZM2G464244 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 5 | 4 | 2 | 2 | 55.56% | 50.00% | 9 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.7388827' χ2 p-value for Mo17 x B73: '1' Biased in favor of strain: '' |
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| GRMZM2G464244 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 2 | 100.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G464000 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.06 x 10-5 | 992 | 621 | 691 | 552 | 61.50% | 44.41% | 1613 | 1243 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.52e-20' χ2 p-value for Mo17 x B73: '.0000806' Biased in favor of strain: 'B73' |
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| GRMZM2G464000 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.8 x 10-23 | 1213 | 333 | 712 | 733 | 78.46% | 50.73% | 1546 | 1445 | RefGen V2 |
χ2 p-value for B73 x Mo17: '7.80e-23' χ2 p-value for Mo17 x B73: '8.20e-38' Biased in favor of strain: 'B73' |
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| GRMZM2G463953 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 4 | 3 | 2 | 4 | 57.14% | 66.67% | 7 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.705457' χ2 p-value for Mo17 x B73: '.4142162' Biased in favor of strain: '' |
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| GRMZM2G463953 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 2 | 0 | 0.00% | 0 | 2 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G463904 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.49 x 10-6 | 278 | 171 | 267 | 174 | 61.92% | 39.46% | 449 | 441 | RefGen V2 |
χ2 p-value for B73 x Mo17: '4.43e-07' χ2 p-value for Mo17 x B73: '9.49e-06' Biased in favor of strain: 'B73' |
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| GRMZM2G463904 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G463738 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 2 | 0 | 4 | 0.00% | 100.00% | 2 | 4 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1572992' χ2 p-value for Mo17 x B73: '.0455003' Biased in favor of strain: '' |
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| GRMZM2G463738 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 1 | 5 | 83.33% | 0 | 6 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G463726 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.64346 x 10-2 | 67 | 48 | 76 | 54 | 58.26% | 41.54% | 115 | 130 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0764346' χ2 p-value for Mo17 x B73: '.0536654' Biased in favor of strain: '' |
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| GRMZM2G463726 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.75282 x 10-1 | 43 | 28 | 6 | 34 | 60.56% | 85.00% | 71 | 40 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.275282' χ2 p-value for Mo17 x B73: '.0139063' Biased in favor of strain: '' |
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| GRMZM2G463580 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 5.68 x 10-14 | 568 | 257 | 487 | 279 | 68.85% | 36.42% | 825 | 766 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.55e-27' χ2 p-value for Mo17 x B73: '5.68e-14' Biased in favor of strain: 'B73' |
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| GRMZM2G463580 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | paternally biased | 2.112 x 10-4 | 13 | 23 | 22 | 13 | 36.11% | 37.14% | 36 | 35 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0001006' χ2 p-value for Mo17 x B73: '.0002112' Biased in favor of strain: '' |
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| GRMZM2G463577 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.89 x 10-5 | 31 | 7 | 41 | 1 | 81.58% | 2.38% | 38 | 42 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0000989' χ2 p-value for Mo17 x B73: '6.74e-10' Biased in favor of strain: 'B73' |
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| GRMZM2G463577 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | no data | 0 | 0 | 0 | 0 | 0 | 0 | RefGen V2 |
χ2 p-value for B73 x Mo17: '' χ2 p-value for Mo17 x B73: '' Biased in favor of strain: '' |
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| GRMZM2G463574 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.82756 x 10-2 | 61 | 90 | 56 | 93 | 40.40% | 62.42% | 151 | 149 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0182756' χ2 p-value for Mo17 x B73: '.0024362' Biased in favor of strain: 'Mo17' |
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| GRMZM2G463574 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.62932 x 10-2 | 91 | 30 | 40 | 45 | 75.21% | 52.94% | 121 | 85 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0462932' χ2 p-value for Mo17 x B73: '.0072665' Biased in favor of strain: '' |
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| GRMZM2G463525 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 7.2611 x 10-3 | 179 | 65 | 131 | 91 | 73.36% | 40.99% | 244 | 222 | RefGen V2 |
χ2 p-value for B73 x Mo17: '2.92e-13' χ2 p-value for Mo17 x B73: '.0072611' Biased in favor of strain: 'B73' |
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| GRMZM2G463525 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 8.8902 x 10-3 | 160 | 53 | 163 | 238 | 75.12% | 59.35% | 213 | 401 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0088902' χ2 p-value for Mo17 x B73: '.0018875' Biased in favor of strain: 'B73' |
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| GRMZM2G463493 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.09212 x 10-1 | 423 | 438 | 451 | 421 | 49.13% | 48.28% | 861 | 872 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.609212' χ2 p-value for Mo17 x B73: '.3096636' Biased in favor of strain: '' |
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| GRMZM2G463493 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 2.25253 x 10-1 | 4 | 6 | 8 | 26 | 40.00% | 76.47% | 10 | 34 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0736349' χ2 p-value for Mo17 x B73: '.225253' Biased in favor of strain: '' |
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| GRMZM2G463464 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 6.23992 x 10-2 | 697 | 566 | 540 | 603 | 55.19% | 52.76% | 1263 | 1143 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0002277' χ2 p-value for Mo17 x B73: '.0623992' Biased in favor of strain: '' |
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| GRMZM2G463464 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 1.631245 x 10-1 | 83 | 53 | 77 | 123 | 61.03% | 61.50% | 136 | 200 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.1631245' χ2 p-value for Mo17 x B73: '.1211413' Biased in favor of strain: '' |
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| GRMZM2G463462 | embryo | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 4.13 x 10-9 | 191 | 67 | 150 | 64 | 74.03% | 29.91% | 258 | 214 | RefGen V2 |
χ2 p-value for B73 x Mo17: '1.16e-14' χ2 p-value for Mo17 x B73: '4.13e-09' Biased in favor of strain: 'B73' |
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| GRMZM2G463462 | endosperm | Waters et al. 2011 | Z. mays B73 | Z. mays Mo17 | 14 DAP | N/A | N/A | not imprinted | 9.04231 x 10-2 | 81 | 28 | 68 | 186 | 74.31% | 73.23% | 109 | 254 | RefGen V2 |
χ2 p-value for B73 x Mo17: '.0904231' χ2 p-value for Mo17 x B73: '.0265282' Biased in favor of strain: '' |