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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G62350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 7.30316 x 10-1 28 12 11 27 70.00% 71.05% 40 38 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '137.987'
Avg. expression score in LCM sample: '75.3709'
Tissue used: 'pure endosperm, no chalazal'
AT5G62350 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.04933 x 10-1 13 3 11 8 81.25% 42.11% 16 19 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '53.0983'
Avg. expression score in LCM sample: '75.3709'
Tissue used: 'full endosperm'
AT5G62350 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 10 10 5 4 50.00% 44.44% 20 9 TAIR8 Avg. embryo expression (dissected): '77.4728'
Avg. embryo expression (LCM): '21.4626'
AT5G62350 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.5752 x 10-2 5 9 35.71% 14 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62350 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62350 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G62340 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.204208'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G62340 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0 0 0.00% 1 0 TAIR8 Avg. embryo expression (dissected): '2.15093'
Avg. embryo expression (LCM): '0'
AT5G62340 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62340 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62340 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G62330 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G62330 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G62330 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62330 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62330 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62320 MYB99 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.24374'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G62320 MYB99 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G62320 MYB99 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '2.83056'
Avg. embryo expression (LCM): '0'
AT5G62320 MYB99 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62320 MYB99 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62320 MYB99 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62310 IRE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.657678'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G62310 IRE endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '4.50761'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G62310 IRE embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.15869'
Avg. embryo expression (LCM): '1.06748'
AT5G62310 IRE endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62310 IRE endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62310 IRE endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.59294 x 10-1 32 10 7 13 76.19% 65.00% 42 20 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.530114'
Avg. expression score for this sample: '217.806'
Avg. expression score in LCM sample: '101.136'
Tissue used: 'pure endosperm, no chalazal'
AT5G62300 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.13204 x 10-1 37 20 37 44 64.91% 54.32% 57 81 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.530114'
Avg. expression score for this sample: '197.794'
Avg. expression score in LCM sample: '101.136'
Tissue used: 'full endosperm'
AT5G62300 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.96042 x 10-1 55 44 11 8 55.56% 42.11% 99 19 TAIR8 Avg. embryo expression (dissected): '495.644'
Avg. embryo expression (LCM): '635.615'
AT5G62300 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.38937 x 10-1 22 6 78.57% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62300 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.13789 x 10-1 87 34 71.90% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62300 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.67 x 10-4 115 26 81.56% 141 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '95.9432'
Avg. expression score in LCM sample: '33.4378'
Tissue used: 'pure endosperm, no chalazal'
AT5G62290 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '180.3'
Avg. expression score in LCM sample: '33.4378'
Tissue used: 'full endosperm'
AT5G62290 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '183.484'
Avg. embryo expression (LCM): '292.539'
AT5G62290 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62290 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62290 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.9166'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G62280 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '2.2162'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G62280 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '27.1553'
Avg. embryo expression (LCM): '23.6478'
AT5G62280 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62280 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62280 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62270 GCD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.89847 x 10-1 6 2 0 7 75.00% 100.00% 8 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.676466'
Avg. expression score for this sample: '122.99'
Avg. expression score in LCM sample: '71.3878'
Tissue used: 'pure endosperm, no chalazal'
AT5G62270 GCD1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 9 6 7 17 60.00% 70.83% 15 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.676466'
Avg. expression score for this sample: '184.211'
Avg. expression score in LCM sample: '71.3878'
Tissue used: 'full endosperm'
AT5G62270 GCD1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.93064 x 10-1 8 13 3 1 38.10% 25.00% 21 4 TAIR8 Avg. embryo expression (dissected): '307.311'
Avg. embryo expression (LCM): '350.234'
AT5G62270 GCD1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.67558 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62270 GCD1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.18834 x 10-1 27 12 69.23% 39 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62270 GCD1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.40919 x 10-1 20 3 86.96% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.30617 x 10-1 26 21 13 21 55.32% 61.76% 47 34 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.731839'
Avg. expression score for this sample: '146.067'
Avg. expression score in LCM sample: '90.7449'
Tissue used: 'pure endosperm, no chalazal'
AT5G62260 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.63432 x 10-1 132 42 79 150 75.86% 65.50% 174 229 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.731839'
Avg. expression score for this sample: '263.262'
Avg. expression score in LCM sample: '90.7449'
Tissue used: 'full endosperm'
AT5G62260 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 9.6714 x 10-2 23 9 2 3 71.88% 60.00% 32 5 TAIR8 Avg. embryo expression (dissected): '105.191'
Avg. embryo expression (LCM): '104.726'
AT5G62260 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 9.6726 x 10-2 7 8 46.67% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62260 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 24 11 68.57% 35 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62260 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.9089 x 10-2 43 10 81.13% 53 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62250 MAP65-9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.63499'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G62250 MAP65-9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.22051'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G62250 MAP65-9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.453648'
Avg. embryo expression (LCM): '0'
AT5G62250 MAP65-9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62250 MAP65-9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62250 MAP65-9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.344154'
Avg. expression score in LCM sample: '.98476'
Tissue used: 'pure endosperm, no chalazal'
AT5G62240 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.111271'
Avg. expression score in LCM sample: '.98476'
Tissue used: 'full endosperm'
AT5G62240 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.19329'
Avg. embryo expression (LCM): '.841425'
AT5G62240 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62240 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62240 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62230 ERL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 3 0 0 40.00% 5 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '2.90105'
Avg. expression score in LCM sample: '5.37944'
Tissue used: 'pure endosperm, no chalazal'
AT5G62230 ERL1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.30769 x 10-1 2 0 0 5 100.00% 100.00% 2 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '7.96021'
Avg. expression score in LCM sample: '5.37944'
Tissue used: 'full endosperm'
AT5G62230 ERL1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.23107 x 10-1 5 11 2 2 31.25% 50.00% 16 4 TAIR8 Avg. embryo expression (dissected): '22.5731'
Avg. embryo expression (LCM): '104.048'
AT5G62230 ERL1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 5.28571 x 10-1 4 0 100.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62230 ERL1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.00032 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62230 ERL1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.93985 x 10-1 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62220 GT18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 1 1 100.00% 50.00% 1 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.153435'
Avg. expression score for this sample: '440.078'
Avg. expression score in LCM sample: '190.235'
Tissue used: 'pure endosperm, no chalazal'
AT5G62220 GT18 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 6.0606 x 10-2 0 3 3 0 0.00% 0.00% 3 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.153435'
Avg. expression score for this sample: '218.188'
Avg. expression score in LCM sample: '190.235'
Tissue used: 'full endosperm'
AT5G62220 GT18 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '85.4533'
Avg. embryo expression (LCM): '63.0817'
AT5G62220 GT18 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.3 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62220 GT18 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.09091 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62220 GT18 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.3 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 2.95626 x 10-1 28 7 6 15 80.00% 71.43% 35 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-07'
Avg. expression score for this sample: '35.9442'
Avg. expression score in LCM sample: '5.02669'
Tissue used: 'pure endosperm, no chalazal'
AT5G62210 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.6 x 10-8 31 9 16 161 77.50% 90.96% 40 177 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.2e-07'
Avg. expression score for this sample: '88.3358'
Avg. expression score in LCM sample: '5.02669'
Tissue used: 'full endosperm'
AT5G62210 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.81103 x 10-1 26 13 7 10 66.67% 58.82% 39 17 TAIR8 Avg. embryo expression (dissected): '75.0972'
Avg. embryo expression (LCM): '7.17095'
AT5G62210 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.61096 x 10-1 56 14 80.00% 70 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62210 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7 x 10-6 131 1 99.24% 132 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62210 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.5 x 10-7 121 0 100.00% 121 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.6788 x 10-2 26 32 24 40 44.83% 62.50% 58 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '113.82'
Avg. expression score in LCM sample: '47.5772'
Tissue used: 'pure endosperm, no chalazal'
AT5G62200 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.17132 x 10-1 46 21 28 98 68.66% 77.78% 67 126 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '122.071'
Avg. expression score in LCM sample: '47.5772'
Tissue used: 'full endosperm'
AT5G62200 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 15 21 2 8 41.67% 80.00% 36 10 TAIR8 Avg. embryo expression (dissected): '68.1584'
Avg. embryo expression (LCM): '36.1436'
AT5G62200 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.989 x 10-3 24 2 92.31% 26 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62200 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.356 x 10-3 81 16 83.51% 97 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62200 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 9.571 x 10-3 33 5 86.84% 38 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G62190 PRH75 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 9.52538 x 10-1 154 143 67 273 51.85% 80.29% 297 340 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.110003'
Avg. expression score for this sample: '447.262'
Avg. expression score in LCM sample: '239.899'
Tissue used: 'pure endosperm, no chalazal'
AT5G62190 PRH75 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.9495 x 10-2 751 420 382 1028 64.13% 72.91% 1171 1410 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.110003'
Avg. expression score for this sample: '838.081'
Avg. expression score in LCM sample: '239.899'
Tissue used: 'full endosperm'
AT5G62190 PRH75 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.4104 x 10-2 234 373 64 121 38.55% 65.41% 607 185 TAIR8 Avg. embryo expression (dissected): '866.35'
Avg. embryo expression (LCM): '947.582'
AT5G62190 PRH75 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.60706 x 10-1 162 90 64.29% 252 TAIR8 Mutant effect: 'N/A (not a MEG)'