Displaying data sets 36801 - 36900 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G04530 KCS19 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 3 1 1 57.14% 50.00% 7 2 TAIR8 Avg. embryo expression (dissected): '21.6226'
Avg. embryo expression (LCM): '29.6131'
AT5G04530 KCS19 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 105 1 99.06% 106 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04530 KCS19 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.77323 x 10-1 161 0 100.00% 161 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04530 KCS19 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 7.24335 x 10-1 319 4 98.76% 323 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 1 0 66.67% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '34.7162'
Avg. expression score in LCM sample: '8.42191'
Tissue used: 'pure endosperm, no chalazal'
AT5G04520 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 3 2 10 50.00% 83.33% 6 12 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '44.5128'
Avg. expression score in LCM sample: '8.42191'
Tissue used: 'full endosperm'
AT5G04520 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 1 0 2 50.00% 100.00% 2 2 TAIR8 Avg. embryo expression (dissected): '76.9237'
Avg. embryo expression (LCM): '61.8635'
AT5G04520 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.47826 x 10-1 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04520 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.7124 x 10-2 19 1 95.00% 20 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04520 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 7 4 63.64% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04510 PDK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 0 0 1 2 66.67% 0 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.389847'
Avg. expression score for this sample: '64.7526'
Avg. expression score in LCM sample: '9.97988'
Tissue used: 'pure endosperm, no chalazal'
AT5G04510 PDK1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1677 x 10-1 3 1 0 8 75.00% 100.00% 4 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.389847'
Avg. expression score for this sample: '82.0767'
Avg. expression score in LCM sample: '9.97988'
Tissue used: 'full endosperm'
AT5G04510 PDK1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.28571 x 10-1 2 0 0 1 100.00% 100.00% 2 1 TAIR8 Avg. embryo expression (dissected): '85.0942'
Avg. embryo expression (LCM): '65.2041'
AT5G04510 PDK1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.1875 0 1 0.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04510 PDK1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 4 1 80.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04510 PDK1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.79362 x 10-1 17 1 94.44% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 7 2 3 5 77.78% 62.50% 9 8 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '39.3626'
Avg. expression score in LCM sample: '35.1574'
Tissue used: 'pure endosperm, no chalazal'
AT5G04500 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 10 5 7 10 66.67% 58.82% 15 17 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '42.6894'
Avg. expression score in LCM sample: '35.1574'
Tissue used: 'full endosperm'
AT5G04500 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '3.61754'
Avg. embryo expression (LCM): '0'
AT5G04500 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04500 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.8795 x 10-1 2 4 33.33% 6 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04500 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 3.186 x 10-3 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04490 VTE5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.02112 x 10-1 60 15 35 31 80.00% 46.97% 75 66 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.349709'
Avg. expression score for this sample: '49.8806'
Avg. expression score in LCM sample: '26.7649'
Tissue used: 'pure endosperm, no chalazal'
AT5G04490 VTE5 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.25302 x 10-1 40 6 38 25 86.96% 39.68% 46 63 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.349709'
Avg. expression score for this sample: '33.0188'
Avg. expression score in LCM sample: '26.7649'
Tissue used: 'full endosperm'
AT5G04490 VTE5 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.16337 x 10-1 90 46 30 17 66.18% 36.17% 136 47 TAIR8 Avg. embryo expression (dissected): '118.844'
Avg. embryo expression (LCM): '33.1672'
AT5G04490 VTE5 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.4832 4 4 50.00% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04490 VTE5 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 8.016 x 10-3 26 4 86.67% 30 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04490 VTE5 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.8 x 10-13 99 3 97.06% 102 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.48496 x 10-1 132 136 44 277 49.25% 86.29% 268 321 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.3e-07'
Avg. expression score for this sample: '156.046'
Avg. expression score in LCM sample: '65.0824'
Tissue used: 'pure endosperm, no chalazal'
AT5G04480 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.1 x 10-8 368 211 139 740 63.56% 84.19% 579 879 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.3e-07'
Avg. expression score for this sample: '204.798'
Avg. expression score in LCM sample: '65.0824'
Tissue used: 'full endosperm'
AT5G04480 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.16113 x 10-1 84 85 31 42 49.70% 57.53% 169 73 TAIR8 Avg. embryo expression (dissected): '114.51'
Avg. embryo expression (LCM): '75.6152'
AT5G04480 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 7.64 x 10-4 143 24 85.63% 167 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04480 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.5 x 10-29 295 5 98.33% 300 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04480 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 529 17 96.89% 546 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04470 SIM endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.14735 x 10-1 51 16 12 41 76.12% 77.36% 67 53 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.008609'
Avg. expression score for this sample: '129.598'
Avg. expression score in LCM sample: '3.71857'
Tissue used: 'pure endosperm, no chalazal'
AT5G04470 SIM endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.766 x 10-2 35 11 2 26 76.09% 92.86% 46 28 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.008609'
Avg. expression score for this sample: '111.49'
Avg. expression score in LCM sample: '3.71857'
Tissue used: 'full endosperm'
AT5G04470 SIM embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Avg. embryo expression (dissected): '1.83516'
Avg. embryo expression (LCM): '0'
AT5G04470 SIM endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.27554 x 10-1 19 8 70.37% 27 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04470 SIM endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.7216 x 10-2 18 0 100.00% 18 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04470 SIM endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.8127 x 10-2 19 0 100.00% 19 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.16197 x 10-1 96 32 38 63 75.00% 62.38% 128 101 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.024333'
Avg. expression score for this sample: '452.618'
Avg. expression score in LCM sample: '220.042'
Tissue used: 'pure endosperm, no chalazal'
AT5G04460 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.9729 x 10-2 160 55 71 193 74.42% 73.11% 215 264 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.024333'
Avg. expression score for this sample: '317.956'
Avg. expression score in LCM sample: '220.042'
Tissue used: 'full endosperm'
AT5G04460 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.03517 x 10-1 33 39 22 17 45.83% 43.59% 72 39 TAIR8 Avg. embryo expression (dissected): '299.602'
Avg. embryo expression (LCM): '114.547'
AT5G04460 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.14207 x 10-1 36 11 76.60% 47 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04460 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.25096 x 10-1 564 238 70.32% 802 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04460 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.1 x 10-6 387 71 84.50% 458 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 5 1 2 5 83.33% 71.43% 6 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733718'
Avg. expression score for this sample: '39.9077'
Avg. expression score in LCM sample: '15.8737'
Tissue used: 'pure endosperm, no chalazal'
AT5G04440 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 2 1 1 4 66.67% 80.00% 3 5 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.733718'
Avg. expression score for this sample: '58.7769'
Avg. expression score in LCM sample: '15.8737'
Tissue used: 'full endosperm'
AT5G04440 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 4 10 0 4 28.57% 100.00% 14 4 TAIR8 Avg. embryo expression (dissected): '61.1305'
Avg. embryo expression (LCM): '45.889'
AT5G04440 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04440 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04440 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.47215 x 10-1 7 1 87.50% 8 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04430 BTR1L endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 4.98619 x 10-1 149 29 69 75 83.71% 52.08% 178 144 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.17516'
Avg. expression score for this sample: '226.143'
Avg. expression score in LCM sample: '139.557'
Tissue used: 'pure endosperm, no chalazal'
AT5G04430 BTR1L endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 3.2759 x 10-2 242 81 187 176 74.92% 48.48% 323 363 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.17516'
Avg. expression score for this sample: '348.744'
Avg. expression score in LCM sample: '139.557'
Tissue used: 'full endosperm'
AT5G04430 BTR1L embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 5.5917 x 10-2 195 114 59 33 63.11% 35.87% 309 92 TAIR8 Avg. embryo expression (dissected): '349.863'
Avg. embryo expression (LCM): '422.847'
AT5G04430 BTR1L endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.12 x 10-4 32 45 41.56% 77 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04430 BTR1L endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.88812 x 10-1 281 149 65.35% 430 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04430 BTR1L endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 497 53 90.36% 550 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 1 1 0 66.67% 0.00% 3 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '49.4783'
Avg. expression score in LCM sample: '35.8188'
Tissue used: 'pure endosperm, no chalazal'
AT5G04420 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 4 0 0 0 100.00% 4 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '72.4725'
Avg. expression score in LCM sample: '35.8188'
Tissue used: 'full endosperm'
AT5G04420 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 2 0 0 0 100.00% 2 0 TAIR8 Avg. embryo expression (dissected): '62.8004'
Avg. embryo expression (LCM): '54.9563'
AT5G04420 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04420 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.47475 x 10-1 2 2 50.00% 4 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04420 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04410 NAC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 46 19 24 44 70.77% 64.71% 65 68 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011558'
Avg. expression score for this sample: '1015.4'
Avg. expression score in LCM sample: '302.292'
Tissue used: 'pure endosperm, no chalazal'
AT5G04410 NAC2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.822 x 10-3 113 29 39 124 79.58% 76.07% 142 163 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.011558'
Avg. expression score for this sample: '1461.22'
Avg. expression score in LCM sample: '302.292'
Tissue used: 'full endosperm'
AT5G04410 NAC2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.89272 x 10-1 44 22 14 8 66.67% 36.36% 66 22 TAIR8 Avg. embryo expression (dissected): '1014.97'
Avg. embryo expression (LCM): '325.443'
AT5G04410 NAC2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 34 11 75.56% 45 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04410 NAC2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.86194 x 10-1 180 77 70.04% 257 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04410 NAC2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.1 x 10-8 235 23 91.09% 258 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04400 NAC077 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.216566'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G04400 NAC077 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G04400 NAC077 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G04400 NAC077 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04400 NAC077 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04400 NAC077 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 2 2 1 2 50.00% 66.67% 4 3 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.384085'
Avg. expression score for this sample: '2.55359'
Avg. expression score in LCM sample: '2.07241'
Tissue used: 'pure endosperm, no chalazal'
AT5G04390 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.73343 x 10-1 14 2 1 3 87.50% 75.00% 16 4 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.384085'
Avg. expression score for this sample: '4.16487'
Avg. expression score in LCM sample: '2.07241'
Tissue used: 'full endosperm'
AT5G04390 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G04390 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04390 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04390 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.77864 x 10-1 3 2 60.00% 5 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04386 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G04386 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G04386 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G04386 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04386 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04386 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G04380 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 0 2 0 1 0.00% 100.00% 2 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '5.2363'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G04380 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '1.6514'
Avg. embryo expression (LCM): '2.17263'
AT5G04380 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04380 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04380 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04370 NAMT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.285436'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G04370 NAMT1 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.85436 x 10-1 15 1 20 10 93.75% 33.33% 16 30 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.285436'
Avg. expression score for this sample: '14.0375'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G04370 NAMT1 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.168694'
Avg. embryo expression (LCM): '0'
AT5G04370 NAMT1 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04370 NAMT1 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04370 NAMT1 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'