Displaying data sets 36701 - 36800 of 169464 in total
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Gene ID Gene Name Tissue Study Parent A Parent B Stage Replicate Replicate Imprinting Status Overall Imprinting Status Imprinting p-value Imprinting Score A x B, A counts A x B, B counts B x A, A counts B x A, B counts % Maternal AxB % Maternal BxA Tot Counts AxB Tot Counts BxA Strain Score Strain p-value Genome Assembly Notes
AT5G04730 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04730 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.83007 x 10-1 2 0 100.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04720 ADR1-L2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.22983 x 10-1 46 42 20 70 52.27% 77.78% 88 90 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.9e-07'
Avg. expression score for this sample: '112.087'
Avg. expression score in LCM sample: '64.0241'
Tissue used: 'pure endosperm, no chalazal'
AT5G04720 ADR1-L2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7 x 10-9 192 73 65 387 72.45% 85.62% 265 452 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '2.9e-07'
Avg. expression score for this sample: '264.158'
Avg. expression score in LCM sample: '64.0241'
Tissue used: 'full endosperm'
AT5G04720 ADR1-L2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 2.0502 x 10-2 25 69 11 18 26.60% 62.07% 94 29 TAIR8 Avg. embryo expression (dissected): '144.42'
Avg. embryo expression (LCM): '33.6695'
AT5G04720 ADR1-L2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.3 x 10-6 112 6 94.92% 118 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04720 ADR1-L2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 9.3 x 10-20 586 37 94.06% 623 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04720 ADR1-L2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.3 x 10-13 527 46 91.97% 573 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.58804 x 10-1 30 16 9 15 65.22% 62.50% 46 24 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.753036'
Avg. expression score for this sample: '45.8116'
Avg. expression score in LCM sample: '32.0121'
Tissue used: 'pure endosperm, no chalazal'
AT5G04710 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 8.96741 x 10-1 47 21 25 39 69.12% 60.94% 68 64 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.753036'
Avg. expression score for this sample: '68.3937'
Avg. expression score in LCM sample: '32.0121'
Tissue used: 'full endosperm'
AT5G04710 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 4.52925 x 10-1 41 28 11 9 59.42% 45.00% 69 20 TAIR8 Avg. embryo expression (dissected): '94.4483'
Avg. embryo expression (LCM): '88.4375'
AT5G04710 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.54235 x 10-1 17 4 80.95% 21 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04710 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 2.3327 x 10-2 63 17 78.75% 80 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04710 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.6 x 10-6 102 13 88.70% 115 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.02941 x 10-1 8 0 0 1 100.00% 100.00% 8 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003898'
Avg. expression score for this sample: '1.6642'
Avg. expression score in LCM sample: '3.67448'
Tissue used: 'pure endosperm, no chalazal'
AT5G04700 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.1073 x 10-2 13 0 0 2 100.00% 100.00% 13 2 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.003898'
Avg. expression score for this sample: '2.77263'
Avg. expression score in LCM sample: '3.67448'
Tissue used: 'full endosperm'
AT5G04700 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 2 0 0 0.00% 2 0 TAIR8 Avg. embryo expression (dissected): '.869658'
Avg. embryo expression (LCM): '1.25586'
AT5G04700 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04700 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0826 x 10-2 9 4 69.23% 13 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04700 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 4.9492 x 10-1 27 2 93.10% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.259209'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G04690 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G04690 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.370366'
Avg. embryo expression (LCM): '0'
AT5G04690 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04690 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04690 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G04680 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 1.0 0 0 0 1 100.00% 0 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1'
Avg. expression score for this sample: '.076106'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G04680 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.132205'
Avg. embryo expression (LCM): '0'
AT5G04680 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04680 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04680 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 6.4472 x 10-1 6 1 1 5 85.71% 83.33% 7 6 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.072397'
Avg. expression score for this sample: '43.982'
Avg. expression score in LCM sample: '41.8891'
Tissue used: 'pure endosperm, no chalazal'
AT5G04670 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 7.781 x 10-2 5 0 4 21 100.00% 84.00% 5 25 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.072397'
Avg. expression score for this sample: '72.142'
Avg. expression score in LCM sample: '41.8891'
Tissue used: 'full endosperm'
AT5G04670 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 5 3 0 0 62.50% 8 0 TAIR8 Avg. embryo expression (dissected): '56.8896'
Avg. embryo expression (LCM): '68.0047'
AT5G04670 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 1 0 100.00% 1 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04670 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 6.59321 x 10-1 9 2 81.82% 11 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04670 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 9 1 90.00% 10 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04660 CYP77A4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 5.193 x 10-3 277 262 156 370 51.39% 70.34% 539 526 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006093'
Avg. expression score for this sample: '302.803'
Avg. expression score in LCM sample: '42.9914'
Tissue used: 'pure endosperm, no chalazal'
AT5G04660 CYP77A4 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 4.33442 x 10-1 188 121 96 205 60.84% 68.11% 309 301 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.006093'
Avg. expression score for this sample: '242.264'
Avg. expression score in LCM sample: '42.9914'
Tissue used: 'full endosperm'
AT5G04660 CYP77A4 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 6.15691 x 10-1 768 807 358 361 48.76% 50.21% 1575 719 TAIR8 Avg. embryo expression (dissected): '1068.51'
Avg. embryo expression (LCM): '459.606'
AT5G04660 CYP77A4 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 18 10 64.29% 28 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04660 CYP77A4 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.91503 x 10-1 50 24 67.57% 74 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04660 CYP77A4 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.04802 x 10-1 59 24 71.08% 83 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04640 AGL99 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G04640 AGL99 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '0'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G04640 AGL99 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '0'
Avg. embryo expression (LCM): '0'
AT5G04640 AGL99 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04640 AGL99 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04640 AGL99 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04630 CYP77A9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.167701'
Avg. expression score in LCM sample: '0'
Tissue used: 'pure endosperm, no chalazal'
AT5G04630 CYP77A9 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '.118331'
Avg. expression score in LCM sample: '0'
Tissue used: 'full endosperm'
AT5G04630 CYP77A9 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '.759504'
Avg. embryo expression (LCM): '.816307'
AT5G04630 CYP77A9 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04630 CYP77A9 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04630 CYP77A9 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04620 BIOF endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.49253 x 10-1 101 76 57 127 57.06% 69.02% 177 184 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.107999'
Avg. expression score for this sample: '148.652'
Avg. expression score in LCM sample: '100.504'
Tissue used: 'pure endosperm, no chalazal'
AT5G04620 BIOF endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.11414 x 10-1 166 93 157 265 64.09% 62.80% 259 422 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.107999'
Avg. expression score for this sample: '140.786'
Avg. expression score in LCM sample: '100.504'
Tissue used: 'full endosperm'
AT5G04620 BIOF embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 3.97759 x 10-1 191 170 53 59 52.91% 52.68% 361 112 TAIR8 Avg. embryo expression (dissected): '273.03'
Avg. embryo expression (LCM): '236.139'
AT5G04620 BIOF endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 6.97001 x 10-1 17 12 58.62% 29 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04620 BIOF endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 3.178 x 10-3 104 33 75.91% 137 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04620 BIOF endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 1.857 x 10-3 107 33 76.43% 140 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 1.0 1 0 0 1 100.00% 100.00% 1 1 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.640405'
Avg. expression score for this sample: '12.727'
Avg. expression score in LCM sample: '5.48232'
Tissue used: 'pure endosperm, no chalazal'
AT5G04610 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.0 3 0 2 5 100.00% 71.43% 3 7 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.640405'
Avg. expression score for this sample: '15.2104'
Avg. expression score in LCM sample: '5.48232'
Tissue used: 'full endosperm'
AT5G04610 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 1.0 1 1 0 0 50.00% 2 0 TAIR8 Avg. embryo expression (dissected): '20.0994'
Avg. embryo expression (LCM): '14.053'
AT5G04610 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 3.95604 x 10-1 1 1 50.00% 2 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04610 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 4.80949 x 10-1 31 13 70.45% 44 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04610 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 6.61836 x 10-1 11 4 73.33% 15 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '96.3222'
Avg. expression score in LCM sample: '16.9761'
Tissue used: 'pure endosperm, no chalazal'
AT5G04600 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '155.859'
Avg. expression score in LCM sample: '16.9761'
Tissue used: 'full endosperm'
AT5G04600 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '138.586'
Avg. embryo expression (LCM): '255.228'
AT5G04600 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04600 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04600 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04590 SIR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '284.183'
Avg. expression score in LCM sample: '167.924'
Tissue used: 'pure endosperm, no chalazal'
AT5G04590 SIR endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 no data 0.0 0 0 0 0 0 0 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '380.296'
Avg. expression score in LCM sample: '167.924'
Tissue used: 'full endosperm'
AT5G04590 SIR embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 0 0 0 TAIR8 Avg. embryo expression (dissected): '436.808'
Avg. embryo expression (LCM): '372.123'
AT5G04590 SIR endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04590 SIR endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04590 SIR endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 0 0 0 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04560 DME endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.28838 x 10-1 215 81 133 267 72.64% 66.75% 296 400 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.008889'
Avg. expression score for this sample: '284.662'
Avg. expression score in LCM sample: '153.432'
Tissue used: 'pure endosperm, no chalazal'
AT5G04560 DME endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.199 x 10-2 361 142 189 473 71.77% 71.45% 503 662 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.008889'
Avg. expression score for this sample: '390.675'
Avg. expression score in LCM sample: '153.432'
Tissue used: 'full endosperm'
AT5G04560 DME embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 7.86462 x 10-1 158 163 60 55 49.22% 47.83% 321 115 TAIR8 Avg. embryo expression (dissected): '275.307'
Avg. embryo expression (LCM): '138.333'
AT5G04560 DME endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.5503 x 10-1 60 16 78.95% 76 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04560 DME endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.7 x 10-8 152 19 88.89% 171 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04560 DME endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 2.7 x 10-10 249 35 87.68% 284 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.19177 x 10-1 549 248 282 596 68.88% 67.88% 797 878 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.5e-20'
Avg. expression score for this sample: '380.458'
Avg. expression score in LCM sample: '123.712'
Tissue used: 'pure endosperm, no chalazal'
AT5G04550 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 1.7 x 10-24 1464 531 689 2368 73.38% 77.46% 1995 3057 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '1.5e-20'
Avg. expression score for this sample: '841.457'
Avg. expression score in LCM sample: '123.712'
Tissue used: 'full endosperm'
AT5G04550 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.35922 x 10-1 414 458 97 72 47.48% 42.60% 872 169 TAIR8 Avg. embryo expression (dissected): '371.758'
Avg. embryo expression (LCM): '187.55'
AT5G04550 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 2.379 x 10-3 329 79 80.64% 408 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04550 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 0.0 1187 111 91.45% 1298 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04550 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 0.0 1261 138 90.14% 1399 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04540 MTM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 8.90197 x 10-1 25 15 26 50 62.50% 65.79% 40 76 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.474123'
Avg. expression score for this sample: '113.389'
Avg. expression score in LCM sample: '73.6806'
Tissue used: 'pure endosperm, no chalazal'
AT5G04540 MTM2 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 2.43318 x 10-1 85 42 28 93 66.93% 76.86% 127 121 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '.474123'
Avg. expression score for this sample: '130.934'
Avg. expression score in LCM sample: '73.6806'
Tissue used: 'full endosperm'
AT5G04540 MTM2 embryo Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent N/A N/A not imprinted 1.0 26 23 10 7 53.06% 41.18% 49 17 TAIR8 Avg. embryo expression (dissected): '81.4098'
Avg. embryo expression (LCM): '47.1198'
AT5G04540 MTM2 endosperm Hsieh et al. 2011 A. thaliana Ler A. thaliana Col-gl met1-6 late torpedo / early bent N/A N/A no data 1.0 16 7 69.57% 23 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04540 MTM2 endosperm Hsieh et al. 2011 A. thaliana Ler fie-1 A. thaliana Col late torpedo / early bent N/A N/A no data 5.6696 x 10-2 510 169 75.11% 679 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04540 MTM2 endosperm Hsieh et al. 2011 A. thaliana Col-gl dme-2 A. thaliana Ler late torpedo / early bent N/A N/A no data 5.55353 x 10-1 225 89 71.66% 314 TAIR8 Mutant effect: 'N/A (not a MEG)'
AT5G04530 KCS19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 1 vs 1 not imprinted 3.6 x 10-6 38 0 1 20 100.00% 95.24% 38 21 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '122.158'
Avg. expression score in LCM sample: '11.0234'
Tissue used: 'pure endosperm, no chalazal'
AT5G04530 KCS19 endosperm Hsieh et al. 2011 A. thaliana Col A. thaliana Ler late torpedo / early bent 2 vs 2 not imprinted 0.0 252 2 1 142 99.21% 99.30% 254 143 TAIR8 Validated by Sanger sequencing: '-'
Overall p-value after pooling both replicates: '0'
Avg. expression score for this sample: '675.704'
Avg. expression score in LCM sample: '11.0234'
Tissue used: 'full endosperm'